Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------TOE2(3)                                            ---------->DOF2                                          <---------YAB1                                        -------->HAHB4                                        <---------AHL20(2)                                        <--------HAHB4                                        --------->ATHB51                                        <---------ICU4                                        -------->ATHB1                           <---------AHL20(2)                                        --------->YAB1                  --------->AHL20(2)                                       --------->ICU4          --------->YAB1  <---------YAB1                     ---------->DOF2--------->AHL20(2)        <---------YAB1 --------->ATHB51                <---------TOE2(3)   <---------YAB1          <-----------GT1  --------->AHL20(2)             <---------MYB52(1)     <---------AHL20(2)     <---------AHL20(2)<---------ICU4           <---------ANAC46        <---------AHL20(2)      --------->AHL20(2)<---------AHL20(2)        --------->ANAC46           --------->AHL20(2)   <---------AHL20(2)  --------->ICU4        --------->ANAC58      <---------AHL20(1)    --------->YAB1   --------->ATHB12            <---        --------->ANAC58--------->YAB1 <---------ATHB51--------->AHL20(2)--------->AHL20(2)  --------      <---------ALFIN1<---------TOE2(3)<---------YAB1  <---------AHL20(2)<---------AHL20(2)--------->AHL20(2)   tagcagtagcacgccgtttagattaaagataacatattttaattattaaagtatttataaatttatcatattgatttaattattttttctcaaaaaaata  579500                        <---------DAG2                        <----------DOF2                      --------------->AGL15              <---------AHL20(2)        --------->TOE2(3)     <-----------GT1 <-----------------AGL1  <----------DOF2  <-----------GT1                  <---------YAB1  <---------DAG2 <-----------GT1              <----------DOF2             <---------YAB1 --------GT1<---------YAB1            <---------AHL20(2)                 --------->ARR11(3) ->AHL20(2)<---------AHL20(1)        --------->AHL20(2)                  <---------ARR11(3)   tacacttttacattatttttttctctctttttggacaaaattaatgctctttttcttattctacttacttctaaatatcatttctcatggtattagcaca  579600                                    <-----------GT1                                  <---------AHL20(2)                                 --------->YAB1                          --------->ANAC55(1)                          --------->ANAC58                          --------->TGA1a                          --------->bZIP60(2)                          <---------ANAC55(2)                          --------->ANAC46       --------->DAG2                          --------->ANAC58 --------->ANAC58                          ==========================bZIP_DOF                          --------->O2     --------->ANAC58          ==========================bZIP_DOF    ---------->DOF2          <----------DOF2 <---------O2     ----------->GT1         --------->ATHB12      <---------ARR14(2) <-----------STF1 --------->DAG2   ----------->GT1          -------->ATHB1      --------->GLK1(2) <---------ALFIN1 ---------->DOF2   --------->YAB1  --------->AHL20(2)   attaggcgattcctttgaatacagaaacacgtcaattttaacaaaaagcaaaaagtagcattcgtaaattgattcgattatttgaattattctgtaatca  579700                                       --------->LBD16                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC58                                      <---------ANAC55(2)                                      <---------ANAC55(1)                                      --------->ANAC55(2)                                  --------->KAN4(2)                        <---------YAB1                       --------------->AGL15                              <---------ARR11(3)                       <---------------AGL15                              --------->ARR11(3)                      ----------------->AGL1                         >>>>>>>>>>GT-3b                      <-----------------AGL1                    ---------->DOF2                      <-----------------AG <---------YAB1    ------>ZmHOX2a(1)    <---------ANAC58  -                      ----------------->AGL3                --------->TOE2(3)     <---------ANAC58  <                      <-----------------AGL2            --------->YAB1   --------->CCA1(1)         <<        --------->AHL20(2)   --------->MYB59         --------->WOX13(1)  --------->RVE1(1)    <------   actacacaaataaaacaaaccctgtccattttaggtcattccgtgactatagcatctatcatccttcaaagaaaaatatcatttccttgtgtttttcttt  579800                                                                                   <----------DOF2               <---------YAB1                                                   ------>MYB46(1)               ----------->TBP                            <---------ANAC58      ------>MYB83     --------->AHL20(2)--------->AHL20(2)            <---------REM1(1)       --------->At4g35610     <---------AHL20(2)<---------AHL20(2)          <---------ANAC46          <---------At4g35610 <---------CCA1(1)  <---------AHL20(1)            *TSS    <---------ANAC46   ----------->RAV1(2) <---------RVE1(1)  --------->AHL20(2)        <---------ANAC58       <---------AHL20(2) -------->ARR11(3)  --------->AHL20(1)        <---------ANAC58      --------->AHL20(1)              < ---------ARR11(3) <---------AHL20(2)        <---------LBD16        <---------AHL20(1)              - <<<<<<<RAP2.2 --------->AHL20(2)      ------>ZmHOX2a(1)  <---------ANAC58 <-----------GT1       ---- ----DOF2<-----------GT1   <-----------GT1  <-----------GT1        <---------AHL20(2)           -----   tagatatttttttacttataaatattttaatacccctcttcctatttttcgggtcttgtagcgttttatatatattttcacctgcctttcttctcccatc  579900      <---------ARR11(3)      --------->ARR11(3)                                                           <---------HSFC1(2)     <---------CCA1(2)                                                             --------->HSFC1(2)   --------->YAB1                                        --------->ICU4       --------->ANAC58  <---------YAB1                                    <---------ANAC55(2)       --------->ANAC58      < ---------ICU4                   --------->ZAT6     --------->ANAC55(2)<---------ICU4            <--- -------->YAB1             --------->LBD16         <---------ICU4     <---------YAB1          <------ ----->WOX13(1)           <---------ANAC46      --------->YAB1      --------->YAB1--------->ANAC58  < ---->MYB46(3)     <-----------GT1           <----------DOF2       <---------YAB1 --------->ANAC58 <-   catcatcatatctctctctaatttctctccgtataacacaaactactctttaataagtatttatgggtgatcataatagctcgcaagcttcttacatcca  580000        <---------DAG2    --------->ANAC58                      <-----------HVH21               <-----------GT1    --------->ANAC58                   <---------ANAC58                  <---------AHL20(2)   --------->SPL7                      <---------ANAC46           ------>ZmHOX2a(2)              <--- <---------SPL7                        <---------ANAC58       <---------YAB1                   ------ ------MYB83                      <---------ANAC58          ------>ZmHOX2a(2)     --------->MYB52(1) ------MYB52(1)                   <---------ANAC58        <---------ARR11(3)   --------->ANAC55(2)  - -TEIL  <----------DOF2         <-----------GT1   --------->WOX13(1) <---------RVE1(1)   <---------At4g35610 ------MYB46(1)     <----------DOF2 <---------MYB52(1)    --------->ARR11(3)   <---------ANAC55(2) <- --------------AtSPL3          <-----------GT1  <---------ATHB12 <---------WOX13(1) --------->MYB46(3)   tttggtacgactttatcaaactctttttttttttttccgtttcttgtcaaatcaatctctgatcttgatcgatattttatcacttaaccgatgctgatca  580100                              <-------TEIL                            <-------PIF5      <---------ICU4        ------->PIF5      --------->YAB1       <---------At4g35610   <---------ICU4          --------->At4g35610   --------->YAB1        <---------ANAC46  --------->ICU4         <-----------RAV1(2)  <---------YAB1     <---------ANAC58 ------CCA1(2)       <---------ANAC58                                                               - --->YAB1           <---------MYB46(3)                                                            --- -------->YAB1 --------->ARR11(3)                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------YAB1  --------->AHL20(1) --------->ATHB12                    ---------->DOF2             ---   tatcataatcatgtgtatatattggttgcaggtgcatcatttgatagaagaatgtatagtattcaacatgggcaaagaagagtgtatggatgctctgttc  580200                                                                                                 <---                                                                   ----------->GT1    ---------->DOF2         --------->YAB1                               --------->CCA1(2)             <---------YAB1 <- -------->YAB1                                       --------->ARR11(3)          <---------AHL20(2)<- ------>ANAC58      --------->YAB1         <---------YAB1  ----------->GT1 ----------->GT1  --------- ------>ANAC58     <---------ATHB12 <-------TEIL     <---------ARR11(3)    --------->YAB1  --------->CCA1(2)   aagcatgctaatattaagcctatcatcacttccacaggtacacatattatagatagatatatggtagtatggtacaatagtaatttatgaaagataaggg  580300                                                                                                  ---           --------->AHL20(2)                                                               ------>MYB83          <---------AHL20(2)                                                                ------>MYB46(1)      --------->ICU4 <---------ANAC46          ---------->DOF2                             --------->ORA47(1) -----P--------->ATHB12   ---------->DOF2  <----------ID1                                  --------->MYB55(1) -----MYB46(1)       --------->ALFIN1 ---------->DOF2--------->ARR11(3)                   --------->MYB46(3) -----MYB83<---------AHL20(2) ------------------------>ANAC81                            --------->DEAR3(2) >MYB52(1)--------->AHL20(2)  --------->ARR11(3)     <---------ARR11(3)                 --------->MYB52(1)   ttggagaattgattaaatttgcagtgtggaaagagctagcgaaagagaacaaagagttcttcgaggcatacgagagaagacgagaagaaataccgaccga  580400  Previous    Next  AGI:  At5g02580.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55240.1); similar to hypothetical protein OsI_019565 [Oryza sativa (indica cultivar-group)] (GB:EAY98332.1); similar to Os05g0462000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055765.1); contains InterPro domain Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476) Range:  from: 579850    to: 580785    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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