Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <----------DOF2                        ------>ZmHOX2a(1)                         --------->GLK1(2)                    <---------ARR14(2)                 <----------DOF2                    --------->ARR14(2)                <---------ANAC46                     <---------                   --------->GLK1(1)                  <---------ANAC58                 <-----------GT1 <---------ANAC46  <---------GLK1(1)                  <---------ANAC58           ----------->GT1 -----GLK1(1) <---------LBD16                 <-----------GT1 <------ZmHOX2a(1) <---------TOE2(3)   ttctcgtgaattcatcttcgggtttcctccttgttgggaacgagtttgtaacagttgctttgaaggagactcttttggcactgatgttaataccgtccct  562000                  --------->ARR11(3)                 <------MYB46(1)                 <------MYB83                <---------AtMYB61                --------->MYB46(2)                --------->MYB59       <---------ANAC58              <---------MYB52(1)      <---------ANAC46      --------->HSFB2a(2)             <---------ANAC58                                        -------      <---------HSFB2a(2)--------->ANAC58                              <---------AHL20(2)    <------- --HVH21 ---------->DOF2 --------->ANAC58                     ------->TEIL           ------>ZmHOX2a(1)   tcgactatcgagaaaggttaggtcttgaagcaatgtgtttgtgtgtgtgtgtttttttctgatgcatctatgttttattgatatgtccttgttttatgat  562100                                                                  --------->ZAT2                                                                  <---------At4g35610                                                         --------->YAB1  <---------ZAT14                                                         <------ZmHOX2a(1)          --------->ANAC58                                                   --------->YAB1 --------->At4g35610       <---------ANAC58                          --------->GLK1(2)----------->RAV1(2)      ----------      --------->ZAT2     <-----------GT1        <---------GLK1(2) <---------ZAT2    --------->ANAC58      <---------ZAT2 <---------AHL20(2)        <------ZmHOX2a(1)<-----------RAV1(2)--------->DAG2   <---------At4g35610<-----------GT1--------->ZAT18   <---------TOE2(3) --------->At4g35610 -->ATHB12    ------>ZmHOX2a(1)  --------------->AtSPL8<---------TOE1(3) <---------At4g35610 --YAB1<---------ANAC58<-----------GT1 <---------------AGL15 --------->GLK1(2)    ---------->DOF2   ttcttagcagcttgtcctcccattttatcaccttgtaagtactctaacaggaatcttaaggataatccagctgagagcagagagaaaagcaatgtgactg  562200                               <---------ARR14(2)                             <---------MYB46(3)                            --------->ALFIN1                         <---------TOE2(3)                                                    <------                        --------->DAG2                                                      ---------                       ---------->DOF2        --------->CCA1(2)                             <--------                    -------->HAHB4           --------->ARR11(3)                     --------->AHL20(2)                    --------->YAB1--------->HSFB2a(2)                       --------->At4g35610                   <---------YAB1 <---------HSFB2a(2)                       <---------At4g35610                  <---------TOE2(3)          <---------ARR11(3)    --------->ARR11(3)      <------ZmHOX2a(1) ->HVH21         --------->YAB1--------->ARR14(2)                  <---------ARR11(3)  ---------->DOF2   agactgatattgcagagattaatgataaaggtggttctggagcaagagatataaaaactgcaaggagaaggtctcttcatctgcaaataaaaaggatact  562300                                       <---------YAB1                                    <------ZmHOX2a(2)                            <---------ICU4                            -------->HAHB4                           <---------ATHB12              --------->LBD16      --------->ARR11(3)             <---------HSFB2a(2)   <---------ARR11(3)                      <---------REM1(1)       --------->ZAT14     --------->ICU4                                  <---------ANAC46       <---------ZAT14    <---------TOE2(3)                            --------->At5g28300       ---------->DOF2<---------At4g35610                            <---------DEAR3(1)     *TSS -----------------TaNAC69(2)--------->ATHB12                        --------->ZAT18       ------->TEIL >ARR14(2)   --------->HSFB2a(2)  <---------GLK1(1)             ---------->CDC5      --------->CCA1(2) -ARR14(2)  <---------LBD16<---------YAB1                      ---------->DOF2  ---------->DOF2   tgaatcgagtaaagtccggaagactgctaatgatggagatcatggtagtgaatttttgaatacggctaagcgcggtgatgtagaaagagatggatgtgag  562400                                                            <---------ICU4                                                            --------->ATHB12                                                            -------->HAHB4                                                           --------->ICU4      --------->YAB1                                       <---------YAB1      <---------ICU4                             <-----------ARR10              <---------TOE1(3)     <---------ATHB12                            --------->GLK1(2)      --------->YAB1              <     <---------ATHB51             ---------->DOF2<---------ARR11(3)    <---------YAB1      <---------TOE1(3)     --------->ICU4   ----------->GT1           <---------GLK1(2)  --------->ARR11(3)      <---------TOE2(3) <---------YAB1 --------->At5g28300    --------->ZAT14     <---------ATHB12     <---------TOE2(3)   -   gttatcaataatgaagacagtgaatggaaactcgatgaaagtgaagtccagaatctttgtaatgatggagataatggtagtgaaggtttcattaaggcta  562500                                                            <--------P                                                 --------->ARR11(3)                                                 <---------ARR11(3)                              <---                                                <---------GLK1(1)                             -------                                                --------->GLK1(1)   ----------->GT1       --------->ARR11(3)              ---------->DOF2              ----------->GT1 <-------GAMYB              <---------ZAT14       <---------REM1(1)                   --------->bZIP60(1)<------MYB83<-----------GT1<---------At4g35610       <---------ANAC46                    <---------bZIP60(1)<------MYB46(1)         --------->ZAT14      <-----------------------TaNAC69(2)--------->ICU4    <---------MYB46(3)         --------->ALFIN1 ---------ZAT14                       --------->YAB1      --------->MYB55(2)    --------->MYB52(1) -------->ZAT14    --------->CCA1(2)  <---------ICU4    <---------At4g35610  --------->YAB1  <-------   agagcagtgatgtagaaaaagataagagcgaagctatcgataatgatgtgatatctccagcggttggaagtggtattaagcataccggtgcagataatgt  562600     ----------->HVH21                                                      --------->At4g35610     <----------ID1                                                         --------->GLK1(1)   ----------->GT1                                                        <---------GLK1(2)  --------->DAG2                                                        ------->GAMYB         ------- ---------->DOF2                                             <---------ANAC46               <-------- ------YAB1                                  ---------->DOF2 <---------ANAC58          <---------ANAC58 -->ICU4         ------->PIF5           <---------LBD16      <---------ANAC58   <---------ALFIN1 --TOE2(3)       <-------PIF5 --------->GLK1(2)----------->GT1      --------->MYB46(3) <---------ANAC58   tgataaagtgacaagtgcaagtgctactggagaatcacttacttcggaacagcaaaatggtttacttgtaacaacagcatctccacattccctgcttaaa  562700                                                                    --------->bZIP60(1)                                                                 ----------->TGA1                                                                 ----------->HVH21                                                       <------ZmHOX2a(2)                                                      <---------ARR14(3)                                                      --------->AGP1<---------bZIP60(1)                                                      <---------GLK1(2)                                            --------->DAG2=================================HOX2a_HOX2a                                   <---------ARR14(2) --------->ARR14(3)                                   --------->ARR14(2) <---------ARR14(2)                                  --------->KAN4(1)   --------->ARR11(3)                         <---                                  --------->GLK1(1)   --------->ARR14(2)            ------>ZmHOX2a(2)                                 ---------->TaMYB80   <---------ARR11(3)           <------ZmHOX2a(2)                                 <---------KAN4(2)  ----------->ARR10             <---------ARR14(2)                           ---------->DOF2 ---------->DOF2------>ZmHOX2a(1)       --------->ARR14(2)                       ---------->DOF2  --------->ANAC46  ================================HOX2a_HOX2a --->DOF2          --------->TOE1(3)    --------->ANAC58 --------->TOE2(3)        <---------ARR11(3) --DOF2            --------->TOE2(3)    --------->ANAC58------>ZmHOX2a(2)         --------->ARR11(3)   gacttagccaagagtagcaaacctgaaaagaaaggaatatccaagaaaagtggcaagatcctcagaagtgacgacaatgtagtagatcccatgaattact  562800                 --------->ZAT18                                                                    <                 <---------------------WRI1                                                  --------                 <---------LBD16                                                            <------MYB46(1)                --------->ALFIN1                      --------->LBD16                       <------MYB83               ------------------------>ANAC81 <---------ZAT14                              ---------     ---------->DOF2                      <---------ANAC58                 --------->HSFB2a(2)      <   --------->ANAC58           ----------->GT1  --------->ZAT14             <---------HSFB2a(2)  -----   --------->ANAC58--------->LBD16        <---------ANAC46            <-----------RAV1(1)<------ZmHOX2a(1) ------LBD16---------->DOF2---------->DOF2<---------ANAC58            --------->ICU4   <---------TOE2(3)   ctgggacgaaagtcaaaagtgcggaaaacaaaaggaaaatcgatgcgagtaaactccagagtccgactagtaatgttgcagaacatagtaaggaaggttt  562900  Previous    Next  AGI:  At5g02520.1    Description:  unknown protein Range:  from: 562392    to: 564140    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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