Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->ANAC58            --------->AHL20(2)                          <---------At4g35610  --------->TOE1(1)--------->YAB1               <---------AHL20(2) <---------LBD16  <---------AHL20(2)            <---------YAB1 <---------HSFB2a(2)  --------->YAB1       <---------AHL20(2) --------->HSFB2a(2) <---------YAB1    <---------AHL20(2)                          <----------DOF2 ------>GLK1(2)--------->AHL20(1)<---------ANAC58       --------->ANAC46       <----------DOF2 ------GLK1(2) <---------AHL20(1)<---------ANAC58       --------->ANAC58     ---------->ID1   attctcggactacattatatattatgatatatggttcttgtttattttttttaattgcaggtaactcgaatattgttttgtctttcttttagtgtattgt  198500                              -------->ATHB1                              --------->ATHB12                              <---------ICU4              --------->GLK1(2)                       <--                              --------->ATHB51         <---------TOE2(3)                          ---                             --------->ICU4      <---------AHL20(2)                        <---------ANAC55(2)                  <---------AHL20(2)           <---------AHL20(2)                          ----------            <---------ANAC55(2)               <---------AHL20(1)                      <------ZmHOX2a(1)            --------->ANAC55(2)               --------->AHL20(1)                    --------->ANAC46    <----------DOF2          <---------ATHB51<---------AHL20(2)     <-----------GT1 <---------TOE2(3)   tgttttctttgattacatatttagtttttgaattattgtgtaagtatatatatttttaagaatttgttttttacatcattttttataaggaatatgtaaa  198600  --------->ANAC58  --------->ANAC55(1)  --------->YAB1                                                                 --------->AHL20(2)  --------->ANAC55(2)                                                        <---------AHL20(2)  --------->ANAC58                                                           --------->AHL20(1)  --------->ANAC46                                    <---------AtLEC2       --------->AHL20(2)------ -------AHL20(2)                                 --------->ARR14(2)         <---------AHL20(2) <----- ------>AHL20(2)                                 <---------ARR14(2)         --------->AHL20(2) <----- ->GT1              --------->YAB1          <-----------HVH21      <------ZmHOX2a(1)       --------->AHL20(2)   ttaaacgtaatagataattctaacataatcaaaccttgttcatacatgtcagaactgcatgtctatataggaatacaattaaattaaaactaaaaatata  198700                                                   <---------AHL20(2)                                                   --------->AHL20(2)                                    <---------CCA1(1)                                    <---------RVE1(1)                                   <---------ARR14(2)                             --------->YAB1       <---------AHL20(1)                        <---------ANAC55(2)       --------->AHL20(2)                        <---------ANAC58          <---------AHL20(2)                        --------->ANAC55(2)       --------->AHL20(1)                            <---- --->AHL20(2)           <---------ANAC58      <------ZmHOX2a(1)   --------->AHL20(2)          ------- ----AHL20(2)      <---------YAB1  <---------ARR11(3)          --------->ATHB12             <-------- ----YAB1      <---------AHL20(2)  --------->ARR11(3)  <---------AHL20(2)                   ---------   aatgccttctcatggaattttttgattcgtatcagaagatatttggcaggaatttattttcttagtgattaaaaaacaaaaaacaaatgttcgaagtatc  198800                                                              ------>ZmHOX2a(2)         ----------->RAV1(2)                                 <------ZmHOX2a(2)         --------->ZAT2                                     <---------ARR14(2)         <---------ZAT2                                     --------->ARR14(2)       <-----------GT1        --------->MYB52(1)<---------AHL20(2)                <---------PCF2      <---------MYB52(1) -----ANAC46             --------->AHL20(2)          <---------ANAC58        <------------AtMYB77 -->MYB52(1)    --------->ZAT18                <---------MYB52(1)          --------->MYB52(1) -HSFC1(2)      <---------ZAT18        <---------YAB1<----------DOF2 <---------ANAC55(2) >HSFC1(2)    --------->PCF2       <----------DOF2   <---------ANAC58--------->ANAC55(2)           --   ggagaaggcccaactgagcccactagtttaaattgtactttgtgattcccttgggccttgtggatcccattaagtactaactgttatttacaagaatgcc  198900                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                         --------->LBD16                                                                        <---------HSFB2a(2)                                                                        <---------ANAC55(2)                <---------AHL20(2)                                      --------->HSFB2a(2)             --------->YAB1                     --------->GLK1(2)      <---------LBD16           <-----------TBP                      <---------ARR11(3)   --------->ARR14(2)      --------->ANAC58                      --------->YAB1           --------->GLK1(2)      --------->ANAC58                    *TSS --------->RVE1(1)     <---------ARR14(2)  ============ --------->At4g35610       ------------>CBF--------->AHL20(2)       <---------GLK1(2)    ------>ZmHOX2a(1) ------->ATHB12 --------->AHL20(2)<-----------RAV1(1)       <-----------RAV1(2)         --------->TOE2(3)   atcatcggaggccatttataaattttggactcaattttgttgcaaataaaaatctgaaattctcaggcgagattccggaagcaaaacattcctaaatttc  199000                                            <---------MYB52(1)                                           --------->LBD16                                 --------->TOE2(3)         --------->LBD16                  <---------ANAC58                                 --------->TOE1(3)         ------>NtERF2                    --------->ANAC55(2)                             --------->HSFC1(2)        --------->ANAC46                  <---------ANAC46                                <---------HSFC1(2)        --------->ANAC58                  <---------ANAC55(2)  --------->ARR11(3)         <---------HSFB2a(1)        --------->ANAC58                  <---------ANAC58     <---------ARR11(3)        ------->TEIL       ------>ZmHOX2a(2)               <---------ARR14(2)--------->ANAC58               <---------ARR14(2) --------->O2                          --------->ARR14(2)--------->ANAC58          --------->DEAR3(1) =============HOX2a_HOX2a       --------->At4g35610      --------->ANAC46      ----------->HVH21   <-   gccaagtgatccgccatgggagaagagaagtctctgcttcagttccgtagttttccttcactcaagacctctgatttcgctctcaccgaagaaccttcat  199100                                                       <---------ANAC58                                                       <---------ANAC58                               <------NtERF2           <---------ANAC46                        --------->ARR14(2)            <------NtERF2                --------->LBD16                    <------NtERF2                   <---------DEAR3(1)            --------->ANAC55(2)                <-----------HVH21   <------ZmHOX2a(1)------>NtERF2                <---------ANAC58              ------->MYC3    --------->LBD16    <---------DEAR3(1)               <---------ANAC58  <              <-------MYC3   --------->DEAR3(1)  --------->ALFIN1       <---------ANAC58      =======             --------->O2   <---------LBD16  ---------->DOF2 <-----------GT1  <----------DOF2 <------ZmHOX2a(1) --------RAP2.6(2)<---------ANAC46 ----------->GT1  --------->ALFIN1    <---------ANAC58      =======   ggaggctggagaacaacgtgtcgtcgaatcgccggagaggaaacaagagaagcggtggcgtttttaccaattttgcgtccctttccgtagcgattaggag  199200                                               <---------HSFB2a(1)                                               <---------ANAC58                                               <---------ANAC58                                            --------->ATERF1(1)                                            <------NtERF2                                          --------->ALFIN1                                          <---------DEAR3(1)                                         <------NtERF2                                         --------->ATERF1(1)                                        <---------ATERF1(1)                                       --------->ALFIN1                                       <---------DEAR3(1)                                      --------->ATERF1(1)                                      <------NtERF2                                    <---------DEAR3(1)                                    <---------ANAC46                                    --------->ALFIN1                                   <---------ABI4(1)                                   <------NtERF2                                   <---------LBD16                                   --------->ATERF1(1)                                   --------->At4g35610                                  <---------RAP2.3(1)                                  <---------ERF1<---------SPL7                                  <---------RRTF1(1)                                  <---------ORA47(2)                                  <---------ATERF1(1)                                  <---------RAP2.6(1)                                 <---------ATERF1(2)                                 <---------RAP2.6(2)                                 --------->ATERF1(2)                                 <---------RAP2.3(2)                                                -         --------->ARR14(2)      <---------DREB2C(2)                                                -         <-----------ARR10       <---------RRTF1(3)                        --------->LBD16          -         --------->GLK1(2)       <---------RRTF1(2)              <---------DEAR3(1)                <-         <---------ARR14(2)      <---------RAP2.3(3)             --------->ALFIN1                 ---        <---------GLK1(2)        <---------ANAC46                <---------AtMYB61                <-- ------>ZmHOX2a(2)               <---------DEAR3(1)             <---------------------WRI1       <--- ------ZmHOX2a(2)     ------->GAMYB<---------At4g35610     <---------ARR14(2)                   ----- ======HOX2a_HOX2a <-----------GT1------>NtERF2--------->HSFB2a(1)<---------MYB46(3)      --------->ARR14(2) =======HOX2a_HOX2a--------->MYB52(1)<---------ATERF1(1)   --------->ARR14(2)        <------ZmHOX2a(1)   agatcggagagaatctacatttaacggtcgtaatggcggcggaggcggagcgttcgcatcggtttcggtggtgattccgaaggaagaggatgaattcgcg  199300                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              <------NtERF2                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                             ------>NtERF2                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           --------->ERF1                                                                                           --------->DEAR4(2)                                                                                           --------->RRTF1(1)                                                                                           --------->ATERF1(1)                                                                                           --------->RAP2.3(1)                                                                                           --------->MYB46(3)                                                                                           --------->RAP2.6(1)                                                                                           --------->ORA47(2)                                                                                           --------->DEAR3(2)                                                                                           <------NtERF2                                                                                           <---------ABI4(2)                                                                                          <---------RAP2.3(1)                                                                                          <---------ATERF1(1)                                                                                          ------>NtERF2                                                            ------>NtERF2                 --------->ABI4(2)                                                            <------NtERF2                 <---------At4g35610                                                            --------->ZAT14               --------->At4g35610                                                            --------->LBD16              --------->ARR14(2)                                                            <---------ZAT18             --------->ATERF1(1)                                                           --------->DEAR3(1)          <---------ATERF1(1)                                                           --------->RAP2.3(2)         --------->LBD16           <---------At4g35610                             --------->RAP2.6(2)        --------->DEAR3(1)           --------->At4g35610                            --------->RAP2.3(1)        <---------LBD16      ------>NtERF2                                       --------->ATERF1(1)     --------->SPL7-----    --------->TOE1(1)                                     <------NtERF2         <---------SPL7------- ----->MYB83 <---------MYB46(3)                          <---------RAP2.3(1)   <---------ANAC58------ ------->P <---------ZAT2                                ------>NtERF2         --------->HSFB2a(1) ----->MYB46(1)                                          <---------ATERF1(1)   <---------ANAC58------ --------ALFIN1                         <---------ETT(2)--------->ANAC58       <---------HSFB2a(1)--- ------>DEAR3(1)                        --------->ETT(2)--------->ANAC46    <------NtERF2<---------ARR14(2) -------MYB46(2)                <----------DOF2         --------->ANAC58   --------->LBD16--------->ZAT2 ---NtERF2 --------->ZAT2      <---------ANAC58         <---------DEAR3(1)--------->DEAR3(1)--------- ->NtERF2<-----------RAV1(2)   <---------ANAC58    ---------->DOF2       <---------LBD16<------NtERF2   cctacctcggcccagctgttgaaaaaccccattgctttactgtcgatagtaccgaaagacgccgcactattcttcgccggagcgttcgccggagccgccg  199400  Previous    Next  AGI:  At5g01490.1    Description:  CAX4 (cation exchanger 4); cation:cation antiporter. Identical to Vacuolar cation/proton exchanger 4 (CAX4) [Arabidopsis Thaliana] (GB:Q945S5;GB:Q9M025); similar to CAX3 (cation exchanger 3), cation:cation antiporter [Arabidopsis thaliana] (TAIR:AT3G51860.1); similar to CAX [Suaeda maritima subsp. salsa] (GB:AAR99078.1); contains InterPro domain Calcium/proton exchanger superfamily (InterPro:IPR004798); contains InterPro domain Calcium/proton exchanger; (InterPro:IPR004713); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837) Range:  from: 195540    to: 198523    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g01500.1    Description:  mitochondrial substrate carrier family protein. Identical to Thylakoid ADP,ATP carrier protein, chloroplast precursor (TAAC) [Arabidopsis Thaliana] (GB:Q9M024;GB:Q8LCT8); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G51870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15815.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 198942    to: 201551    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version