Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <-------TEIL                              --------->ARR14(2)                                            ---------                         <---------bZIP60(2)                                              --------->At4g35610                         <---------O2                                                     <---------At4g35610                         <---------ANAC46                                        <------NtERF2                      ----------->HVH21                                        <---------RAP2.6(2)                ------->TEIL  <---------ARR14(2)                               --------->ETT(1)     ----------->GT1  ----------->TGA1                                        --------->RAP2.6(3)---- -->DOF2       <---------CCA1(2)    <---------ALFIN1     <---------ZAT18     <-----------HVH21   ----   agttgaagggtaaccttgtatctagtgacgaggttcttccacttgctcttacattgttctgcgcttcggacaaaacccttgtcggccatcttagcagcca  157200                         <------MYB46(1)                         <------MYB83                    <---------ANAC55(2)                    <---------ANAC58                    <---------ANAC46                    <---------ANAC55(1)      ---------->DOF2 <---------MYB52(1)    <---------HSFB2a(2) <---------AtMYB61                                                      <-----    --------->HSFB2a(2) --------->MYB59                                                   >>>>>>>>>>> >ANAC46            <---------YAB1 ---------->DOF2                ---------->DOF2  ------>ZmHOX2a(1) ----->ANAC58       <---------ANAC58             <---------ARR11(3)           ---------->ID1<-------- ----->ANAC58     <-----------GT1--------->AtLEC2--------->ARR11(3)       <----------DOF2--------->ANAC46   cgacttcccaaagaagcttattacgtttggtctccatgaaagtttgatcaagttcttctcttatagccaaaagctcctttgtctcctctatgctccactg  157300                                                                         <---------MYB46(3)                                                                       <---------ZAT2                                                                       <---------At4g35610                                                                    <------ZmHOX2a(1)                                                                    =========================HOX2a_HOX2a                                                                 <------NtERF2                                                               --------->ALFIN1                                                              --------->ATERF1(1)                                                              <---------At4g35610                                                              --------->At4g35610                                                              <---------LBD16                                                              <------NtERF2                                                              <---------ABI4(1)                                                             ------>NtERF2                                                             <---------ATERF1(1)                                                             <---------RRTF1(1)                                                             <---------RAP2.6(1)                                                             <---------RAP2.3(1)                                                             <---------DEAR4(2)                                                             <---------ORA47(2)                                                            <---------ATERF1(2)                                                            <---------DEAR3(1)                                   ------>ZmHOX2a(2)        --------->ALFIN1                                  <------ZmHOX2a(2)         --------->ATERF1(2)                                 --------->ARR14(2)         --------->DEAR3(1)                              ------>NtERF2                 <---------RRTF1(2)                          --------->DEAR3(1)                <---------RRTF1(3)                        ------>ZmHOX2a(1)                   <---------RAP2.6(2)                        ==================HOX2a_HOX2a       <---------ANAC46                        <---------ATERF1(1)                --------->ATERF1(1)                        =================HOX2a_HOX2a       <------NtERF2 <-----------RAV1(1)                       <---------ALFIN1                    --------->RAP2.3(1)                     ====================HOX2a_HOX2a       <---------ABI4(1)                  =======================HOX2a_HOX2a      <---------DEAR4(2)                  ========================HOX2a_HOX2a     <---------ATERF1(1)                 <---------ALFIN1<---------ARR14(2)       <---------RAP2.3(1)              --------->AtMYB61<------NtERF2             <---------RAP2.3(2)             <---------ZAT2  --------->LBD16            --------->At4g35610            ------>NtERF2 --------->ANAC46   <---------ANAC46<---------ERF1  --------->GLK1(2)  =====================HOX2a_HOX2a ---------->CDC5  --------->At4g35610    ------- <---------GLK1(2)------>ZmHOX2a(1)<-------TEIL--------->ALFIN1<---------ANAC46          --------->ANAC55(2) <---------ARR14(2)  ------>ZmHOX2a(1)      <------NtERF2<---------DEAR3(1)              <---------ANAC55(2) --------->ARR14(2) <---------ALFIN1      <---------DEAR3(1)<---------RAP2.3(2) <-------GAMYB <------ ------RAV1(1)<---------ALFIN1--------->LBD16--------->DEAR3(1)<---------DEAR3(1)     <------ZmHOX2a(2) >>>>>>LFY --------->ANAC46 <---------LBD16------>NtERF2<---------At4g35610    <-----------RAV1(1)  - -ALFIN1   <---------ALFIN1------>NtERF2  --------->DEAR3(1)<---------RAP2.3(3)<---------MYB46(3)<---   tgggattctctccccacctcctcctcctccgccgggatccatcgtcgccgtggtgctcagcggcggcggaggaagctgttgctgttggatcaagtgatga  157400                                               --------->ATHB51             --------->REM1(2)                                               --------->ATHB12          <---------bZIP60(2)                                              <---------MYB52(1)         <---------ANAC58                                            <-----------------AGL3       <---------ANAC55(2)                                            =========================================================                                        <---------DEAR3(2)               <---------ANAC46                <---------MYB46(3)  --------->TGA1a                      <---------ANAC58               <---------AtMYB61    <---------O2                         --------->O2               <---------ANAC46     =========================================bZIP_DOF             <---------MYB46(3)     --------->O2                         --------->ANAC55(2)            <---------DEAR3(1)      <---------TGA1a                      <---------ANAC55(1)            <---------AtMYB61       <---------ANAC58                     <---------bZIP60(1)          <---------MYB46(3)        <---------bZIP60(1)                  --------->bZIP60(1)      <---------AtMYB61             --------->bZIP60(1)                  <---------TGA1a --------->At4g35610                <---------ANAC46                     <---------O2 <---------At4g35610 <---------REM1(1) <---------DEAR3(1)                --------->TGA1a -->ICU4 <---------AtMYB61 ===================bZIP_DOF                ----------->HVH21 ---YAB1 --------->ALFIN1  ---------->DOF2 <-------TEIL               ----------->TGA1 ------>TEIL--------->ALFIN1        <---------ANAC58              <----------DOF2  ----------->GT1<-- ------REM1(1) --------->ALFIN1 <-----------HVH21                 =================bZIP_DOF     -----   tgaagctgatggtggtggtggtgatgttggaaagggttacgtcggtccattatttggaatcgaattgtctttgtgacgtgaagagaagaaataagaggga  157500                  <------MYB46(1)                  ----------->GT1         <---------AHL20(2)    --------->AHL20(1)    --------->AHL20(2)     <---------YAB1    <---------AHL20(2)  --------------->AGL15    <---------AHL20(1)  <---------------AGL15                                                       *TSS   <---------AHL20(2)  <---------ANAC55(2)                                                          <   --------->AHL20(2)  <---------ANAC46                                            ---------->DOF2  < =======================================MADS_MADS    ---------->DOF2         <------ZmHOX2a(1)      - -------ARR11(3)  <------MYB83              --------->ATHB12             <------ZmHOX2a(1)   -------- ------>GT1  <-----------RAV1(1)       ----------->GT1                 ------------------------>ANAC81   gataattttatttttttgttgggttacttataaatgaagagaggtttcattgaaaaaaagaagagaagacagagaggaaggagagaaaagagaagaatct  157600                                                                                            <--------                                                                                       -------->ATHB1                                                                                       <---------ICU4               ----------->GT1                                                        <---------YAB1               <---------ANAC46                                                       --------->ICU4         <---------TOE2(3)                                                            --------->AHL20(1)    --------->AHL20(2)                                                                <---------AHL20(2)    <---------AHL20(2)                                                             <---------YAB1 --------->AHL20(2)                                                               <---------AHL20(2)< <---------AHL20(2)                                                   <----------DOF2 --------->AHL20(2) ---------AHL20(1)                                                 ---------->ID1 --------->AHL20(2)< ---------AHL20(2)          --------->ALFIN1            <---------ZAT14          --------->AHL20(2)-- -------->AHL20(2)  ---------->DOF2                     --------->ZAT14          --------->YAB1  ---- ->GLK1(2) <------ZmHOX2a(1)----------->GT1            --------->ALFIN1          <---------AHL20(2)<-   aattaatttataaggatgtgtgaaaagaaggtgtgaaatcgtagagggacgatagaagtgtagttttttgttcttttctctaattaaaattattaagatg  157700            -------->HAHB4            <---------ICU4            --------->ATHB51            --------->ATHB12            -------->ATHB1            <---------AHL20(2)           --------->ICU4           <---------ATHB51           <---------YAB1         -------->HAHB4         <--------HAHB4         --------->ATHB51         <--------ATHB1         <---------ICU4        <---------ATHB51        --------->AHL20(2)        <---------YAB1        --------->ICU4      --------->YAB1     <---------AHL20(2)    --------->AHL20(2)    <---------AHL20(2)                 <---------AHL20(2) -TOE2(3)--------->YAB1                --------->ATHB51 ---------RVE1(1)                --------->HSFB2a(2)                                   <------ZmHOX2a(1) ---------CCA1(1)          <---------ARR11(3)       --------->AHL20(2)        ----------->GT1   <---- ------->ARR11(3)          <<<<<<<ZML2 --------->AHL20(2)       --------->ANAC58      <----------ID1 ------->ARR10          <---------HSFB2a(2)         <---------AHL20(2)    <----------DOF2       <---- --------ARR11(3)       --------->HSFB2a(2)<---------AHL20(2)   --------->ANAC58   ---------->DOF2<--   agattttttaataattattgaatatactagaacttatagaattatttagttgaataaaatacgaacacgaatgactcttttggtgaaaaggacacaattc  157800                           <---------GLK1(1)                               <---------AHL20(2)                 ---------->DOF2                                           --------->AHL20(2)           --------->YAB1  --------->GLK1(1)                           --------->AHL20(2)        --------->YAB1    <---------ARR11(3)                        --------->MYB52(1)       --------->AHL20(2) --------->ARR11(3)                      <---------MYB52(2)     --------->TOE2(3)  ----------->ARR10  --------->YAB1        --------->At4g35610 -----ANAC58  --------->YAB1         <---------LBD16             --------->ZAT2      <---------DAG2 -----ANAC58--------->AHL20(1)   <---------DAG2                  <---------At4g35610 <----------DOF2 -------YAB1--------->AHL20(2)   <----------DOF2           ---------->DOF2 <---------ATHB51 <--------   gtgattacattaaaaataataaagcttagatatccctttttcggatgataaactctagatttaaagcagctaactaaataattcatactttttttttctt  157900                                                                     ----------->GT1                                                               --------->ARR11(3)                                             <---------ANAC58  <---------ARR14(2)              ------                                             <---------ANAC58  <---------ARR11(3)         --------->TOE2(3)                                          <--------P          --------->RVE1(1)     --------->TOE2(3)                        --------->TOE2(3)--------->At5g28300  --------->CCA1(1)  ------->GAMYB <----- ---GT1              --------->WOX13(1) ----------->GT1   <---------TOE2(3)  XXXXXXXXXXXXXXXXXXXX>MIR852   cgtattctagagtttaaaaatagcaatctcaaacaattacaggggtaacttgcatcagttaagaatatcttaagtaaaaacaatcgccttaatcttagag  158000                                        <---------ANAC58                 ---------->DOF2      <------                                 <---------YAB1              <----------DOF2              <---------AHL20(2)                       >>>>>>>>>WRKY18  <---------ANAC58  --------->ANAC46      --------->HSFB2a(2) ----->GT1            ----------->HVH21 <---------ANAC46  --------->ANAC58      <---------HSFB2a(2) ----ZAT6  <---------ARR11(3)<---------WOX13(1)           --------->ANAC58    <---------REM1(1)<-----   taaaatcaaacaatatgtttttttttgacagattgattatttgtgtgcatcattctaaacacgctttcaaatttgtaaagttgtagaactatatttttac  158100  Previous    Next  AGI:  At5g01380.1    Description:  transcription factor. similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT2G38250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50136.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005) Range:  from: 155638    to: 157600    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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