Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                         <-----------GT1                                        <----                                     <---------CCA1(1)                                        <------                                     <---------RVE1(1)                                       --------                                    --------->ARR11(3)                                      ---------                            <---------ZAT18                                                 <--------   --------->AHL20(1)       <---------ZAT14   ------>MYB83                                <---------- ------>AHL20(2)            --------->ZAT14   ------>MYB46(1) --------->AHL20(2)       ----------->GT1 ----->GT1      ---------->DOF2     <---------ARR11(3)        <---------AHL20(2)      --------->DAG2 --->YAB1   ---------->DOF2 --------->ZAT18  ----------->RAV1(1)                     ---------->DOF2   taaaatatgttatcgaaagaaagaacaatgtgcactgagatatttaccaacaaaacaaaacaatataaatacactaaaaactctaagaaaagttacttat  97500                                            <---------YAB1                                         <---------YAB1                                        --------->AHL20(2)                                        <---------AHL20(1)                                        <---------AHL20(2)                                      <---------YAB1                                     --------->AHL20(1)                                       <------                                     --------->AHL20(2)                                       ------- ---->ICU4                         --------->AHL20(1)       <---------ZAT14                   <------ -----YAB1                         <---------ARR11(3)    <---------ANAC46                    <------- ---ICU4                           --------->AHL20(2)    <------MYB46(1)               ----------->GT1 ->ICU4                            <---------AHL20(1)    <------MYB83        ----------->GT1 <------- >ANAC55(2)                 --------->YAB1--------->YAB1--------->MYB46(2)  <---------TOE2(3)-------- -ANAC55(2)           <---------TOE2(3)--------->YAB1   --------->MYB59     <---------TOE1(3)-------- -GT1        <---------ANAC46  --------->YAB1     ---------->DOF2  --------->MYB46(3)  --------->YAB1   tattagctatgtgttttgtgtattaatgtataatcaaaatattataatgctagaaagtttggtatagtgaccactgtgaaggtaacaaatagtaatataa  97600 ---YAB1               --------->ANAC58 -->AHL20(2)           --------->ANAC58     --------->YAB1 ---AHL20(2)         <---------GLK1(1)     --------->ICU4 --------->YAB1 --AHL20(1)          --------->GLK1(1)     <---------YAB1<---------ATHB12 --AHL20(2)         <---------ARR14(2)   --------->bZIP60(1)                ---------->DOF2    ------ ->AHL20(1)         --------->ARR14(2)   <---------bZIP60(1)    ----------->GT1                <----- ->AHL20(2)--------->YAB1      <---------AHL20(2)  <-----------GT1      ----------->RAV1(1)<---------TOE2(3)   tttgtgttcaaaatcaaaactggatacccaaaatttatgtgtgtcatcataagttacaaatcaaaatggtaaacccacaaaagaaaacacactaagttta  97700                                      --------->ANAC58                                      <------MYB83                                      <------MYB46(1)                <----------DOF2                                      ----------->GT1             ------>ZmHOX2a(1)                         --------->YAB1    ---------->DOF2  --------->HSFC1(2)                  --------->ALFIN1    --------->At4g35610   <---------HSFC1(2)                 <----- --->AHL20(2)   <---------bZIP60(2)   --------->ANAC58    --------->DAG2                      ------- ----AHL20(2)   <---------ANAC46    <-----------RAV1(2)  ---------->DOF2                   <---------   attagagaggtctaaatgatgtgggaatcatagagaaggcaggtaaaaagaaatgaagaaaaagcttcctgcttttatgctctctctctctctctttcat  97800                                   ----------->GT1                          --------->RAP2.6(2)                        ------>NtERF2                        <---------DREB2C(1)                        --------->ATERF1(1)                        <---------ATERF1(1)                       <---------SPL7                       ------>NtERF2                       <---------ATERF1(1)                       <---------RAP2.3(1)                      <---------RAP2.3(2)                                       --------->ZAT14                 ---------->DOF2 ---------->DOF2                                <---------ZAT18             <---------YAB1<------NtERF2                                        <---------ZAT14           <---------ICU4 ----------->RAV1(1)                                 --------->ZAT14          <---------YAB1<------NtERF2                                       --------------->AtSPL3        --------->YAB1<---------DEAR3(1)                                    --------------->AtSPL8       <---------YAB1 <---------RAP2.6(2)                                   --------->ZAT6   ----------->GT1   --------->RAP2.6(3)  --------->MYB52(1)              <-----------GT1 -------CBF--------->YAB1--------->ATERF1(1)                          <---------MYB52(1)        >>>>> -->ATHB12--------->ICU4--------->DREB2C(1)          <---------AHL20(2)  <---------YAB1      *TSS -DOF2 <---------AHL20(2)--------->RAP2.3(1)         --------->AHL20(2)<---------ICU4  ------>ZmHOX2a(1)   tgaacatgtataattataacaaaggcggccgcattaaaagtaaaaaacagaacatttttttaagtagacttcgttattacagtactctcctactcacttg  97900                                                                      <---------ARR11(3)         --------->ANAC55(2)                                          --------->ARR11(3)         <---------ANAC55(2)       <----------DOF2                  <---------AHL20(2) <---------AHL20(2)       <-----------GT1       --------->ZAT14    xxxxxxxxxxxxxxxx>smallRNA(i)  <---------MYB46(3)   <---------YAB1     --------->ARR11(3)    <xxxxxxxxxxxxxxxxsmallRNA(s) <----------DOF2        <---- >>>>>>>>>>>>LFY      <---------ARR11(3) ------>ZmHOX2a(1)         --------->AHL20(2)<----------DOF2   ccattgttattacataaccagagagctcttcttcactcttttcctctctctccctccctccctcttccattaaatctttgtggttctcttttattgtttt  98000                          ---------->DOF2              <---------ANAC46                                            <----------ID1             <---------LBD16                                              ----------->GT1          <---------At4g35610                                          ---------->DOF2     <---------ZAT14  --------->ZAT14                             <------ZmHOX2a(1)     --------->ZAT14  <---------ZAT14                         <---------ZAT2    --------->DAG2   <---------ZAT18   --------->ALFIN1                         --------->ZAT2   ---------->DOF2   --------->ZAT14   ----------->GT1                          --------->At4g35610        <---------ARR11(3) -----YAB1--------->At4g35610           ---------->DOF2       <---------At4g35610        --------->ARR11(3)   gatactgtgctctgcttcggagagtgtagaaagagacagagctaaagtctctgtgtttcttctcagcaggactaaaaggaaaaaagggtaagagcttgga  98100                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)            --                                                                     --------->ATHB51              <-                                                                     <---------ICU4               <--                                                                     --------->ATHB12       <--------                     --------->GLK1(2)                               <--------HAHB4        --------->ARR11(3)                     --------->ARR14(1)                              -------->ATHB1        <---------ARR11(3)                    --------->ARR11(3)                              <---------ATHB12      --------->YAB1                    <---------GLK1(2)--------->TOE2(3)              --------->ICU4     --------->YAB1                    --------->ARR14(2)                              <---------ATHB51  <---------YAB1                  ----------->ARR10  --------->TOE1(3)       <---------DAG2           <---------AHL20(2)              --------->YAB1      <-----------GT1         <-----------GT1             --------->AHL20(2)           --------->TOE2(3)<----------DOF2            ----------->GT1          <----------DOF2   <--     <-----------GT1<---------ARR14(2)         --------->YAB1<----------DOF2    <---------DAG2<------   gacaatttttcttccttcataagattctctctttttaaaccataaaaaatcaaaagattgtaacttttcaattatttgtttgctttatataattatcttt  98200                                                                                   <---------DEAR3(2)     --------->SPL1(1)                                                             ----------->GT1    <---------SPL7                                                                <---------ATERF1(2)    <---------SPL1(2)                                                         --------->ALFIN1   <---------ANAC58                                                           ----------->HVH21   <---------ANAC58          <---------ANAC46                               <---------bZIP60(2)   <---------ANAC46          <-------GAMYB                                 <---------AtMYB61  --------------->AtSPL3   <---------ANAC58                      <---------LBD16  --------->ATERF1(2) ------->TEIL              <---------ANAC58                      --------->HSFB2a(2)      --------->DAG2 ------->ZAT14             <---------ANAC46                      <---------HSFB2a(2)<---------MYB52(1) --------ZAT14           <-----------HVH21                       --------->LBD16  <---------MYB46(3) -------ANAC58   <---------WOX13(1)                    --------->YAB1  <------ZmHOX2a(1) ---------->DOF2 -YAB1--------->SPL7    <-----------RAV1(1)     ----------->GT1 <---------ANAC46 <---------ANAC46  <- -------ANAC58 --------->ATHB12         --------->MYB52(1)     <---------LBD16<---------RAP2.6(2)  -- ----DOF2  --------->GLK1(1)<---------MYB46(3) <------ZmHOX2a(1)<---------LBD16 <------NtERF2--------   gtgtaccgtacagaaatcgattgctaatgtcgggtgagaaacaagcggaggagtcaatagtagtctccggggaggatgaggtggccggtagaaaagtgga  98300                 --------->ARR14(2)                 --------->ARR11(3)                <------ZmHOX2a(1)           --------->ALFIN1                                                  --------->ZAT18          <------NtERF2                                                    <---------PCF5        --------->ALFIN1                                                   <---------PCF2        <---------ANAC46                                                   <---------TCP16(1)        <---------DEAR3(1)                                                 --------->ARR14(2)       <---------LBD16                                                     <---------ARR14(2)       <------NtERF2                                                      --------->ATERF1(1)       --------->ATERF1(1)  --------->MYB52(1)                          <---------ANAC46      <---------RAP2.3(1) <------NtERF2                                 <---------ANAC58 ----------->RAV1(2)     <---------RAP2.3(2) ------>NtERF2                                  <---------ANAC58------>NtERF2     <---------DEAR3(1) --------->ATERF1(2)                        <---------ANAC58    --------->ANAC58    --------->At4g35610 <---------ATERF1(2)                        <---------ANAC58   --------->SPL7    <---------At4g35610--------->RAP2.6(3)                         <---------AtLEC2 ----------->HVH21 <-------TEIL<------ZmHOX2a(1)    ------>NtERF2               ------>ZmHOX2a(1)<------NtERF2 --------ARR14(2)<---------ARR14(2)                     --------->At4g35610--------->TCP20        <-- ------->ARR14(2)<---------ARR11(3)<------NtERF2       <---------ARR11(3) <------NtERF2--------->ANAC58 ->ALFIN1 --------->ATERF1(1)  ------->GAMYB           --------->ARR11(3)<---------MYB46(3)       ---   agattcagcggcggaggaggatattgacggcaacgggggcaatggatttagtatgaagagcttcctctggcatggcgggtccgcttgggacgcctggttt  98400  Previous    Next  AGI:  At5g01240.1    Description:  amino acid permease, putative. Identical to Auxin transporter-like protein 1 (LAX1) [Arabidopsis Thaliana] (GB:Q9LFB2;GB:Q9SMW2); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT2G21050.1); similar to AUX1 (AUXIN RESISTANT 1), amino acid transmembrane transporter/ transporter [Arabidopsis thaliana] (TAIR:AT2G38120.1); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT1G77690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15795.1); similar to hypothetical protein OsI_004389 [Oryza sativa (indica cultivar-group)] (GB:EAY76542.1); similar to hypothetical protein [Vitis vinifera] (GB: Range:  from: 97893    to: 101834    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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