Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------
ARR11(3)
<---------
ARR14(2)
<---------
ZAT2
--------->
ZAT2
<---------
At4g35610
--------->
At4g35610
--------->
ALFIN1
<---------
REM1(1)
<-------
MYC2
------->
MYC2
------->
MYC3
<-------
MYC3
------->
MYC4
<-------
MYC4
--------->
KAN4(2)
<
<---------
ANAC55(2)
<
<---------
TGA1a
-----
<---------
O2
<---------
GLK1(1)
<-----
--------->
HSFC1(2)
<---------
At4g35610
--------->
O2
<----------
TaMYB80
--------
<---------
HSFC1(2)
--------->
At4g35610
---------->
DOF2
--------->
ARR14(2)
<---------
ATHB12
--------->
GLK1(2)
--------->
DAG2
==================
bZIP_DOF
--------->
YAB1
<-----------
ARR10
================================================
bZIP_DOF
--------->
WOX13(1)
->
DOF2
---------->
DOF2
<-------
TEIL
--------->
TGA1a
--------->
TOE2(3)
agagaagcttagccagtacaaataaagttgttcagaagaaaaacaaattcgtataagcacacgtgtagctggatattctcagcatttacattaatcaatc
57800
--------->
ANAC46
<-----------
GT1
--------->
CCA1(2)
---------
AHL20(1)
<---------
TOE2(3)
---------
ARR11(3)
--------->
ARR11(3)
---->
YAB1
<---------
TOE2(3)
-
----
ATHB12
--------->
ICU4
<---------
WOX13(1)
<---------
WOX13(1)
<
->
WOX13(1)
<---------
TOE2(3)
--------->
ATHB12
<---------
YAB1
--------->
YAB1
---
aatatatacacttcaatctaatgtttatattaagaaattgattgagatttgatagtttttgtatgttttgatggacaacaatgaaaaattgttgtccctc
57900
<---------
AHL20(2)
<---------
ICU4
--
--------->
YAB1
---------
<--------
HAHB4
--------->
TOE2(3)
-------->
ICU4
<---------
MYB52(1)
<------
ZmHOX2a(2)
<---
---------
ATHB12
<---------
MYB52(1)
----------->
GT1
<------
NtERF2
-------->
P
--------->
YAB1
------>
YAB1
<---------
MYB46(3)
---------->
DOF2
--------->
YAB1
<------
ZmHOX2a(2)
--------->
TOE1(3)
taatcattttttttttttggctgttcgttttttttgtttttctcaaagaacagaaatatcagaatggcagagagatcgatcaacccattaaccataaaat
58000
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
----------->
RAV1(2)
--------->
AHL20(2)
----------->
HVH21
--------->
YAB1
--------->
At4g35610
--------->
AHL20(2)
<---------
AHL20(2)
<----
<---------
ZAT14
--------->
AHL20(2)
--------->
AHL20(2)
-----
--------->
ZAT14
<---------
YAB1
--------->
TOE2(3)
<---------
ARR14(2)
<----
------->
ANAC46
<---------
AHL20(2)
<-----------
GT1
<---------
ZAT18
<---------
At4g35610
>
AHL20(2)
<---------
YAB1
<-----------
HVH21
<----------
DOF2
<---------
ANAC46
--------->
At4g35610
--------
GT1
<---------
YAB1
<-----------
GT1
---------->
DOF2
<---------
At4g35610
cacagcactgtttttattatattaaaattgtcagactcaatatttaaccttctttcttaaaaacaaaaaatagcgcagatttaatctgacacctgcaaaa
58100
<---------
AHL20(2)
--------->
MYB52(1)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
---------
<---------
AHL20(2)
<---------
AHL20(2)
---------
<---------
AHL20(2)
<---------
AHL20(2)
<----------
ID1
--------->
AHL20(2)
--------->
AHL20(2)
<------
MYB46(1)
--------->
TOE2(3)
--------------->
AGL15
<-----------
GT1
<------
MYB83
<---------
AHL20(2)
<---------------
AGL15
<---------
MYB46(3)
<---------
MYB52(1)
-----
AHL20(1)
<----------
DOF2
<---------
MYB52(1)
<----------
DOF2
<-------
GAMYB
---->
AHL20(1)
<---------
AHL20(2)
<-----------
GT1
*
TSS
<----------
DOF2
---------->
DOF2
-----
ARR11(3)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
At4g35610
<---------
MYB46(3)
tatttcattaaatattttaaatttctttaaataataaataactgtttgttatttctcttc
atctcctttctctttcaatgtccgttggtaaaagacgaaa
58200
--------->
At4g35610
<---------
At4g35610
--------->
CCA1(2)
---------->
DOF2
<---------
YAB1
--------->
ANAC58
--------->
ANAC46
<---------
CCA1(2)
--------->
WOX13(1)
--------->
YAB1
>
ANAC58
<---------
ARR11(3)
--------->
ANAC58
--------->
ANAC58
---------
>
ANAC58
--------->
ARR11(3)
--------->
ANAC46
--------->
ANAC58
---------->
DOF2
gtttcagacataacatctcttcccatctctctcccctctaagcaattaagcagacaagacactgatgatatgagacgaagagaaagaagtcttatcactc
58300
--------->
DEAR3(1)
<---------
At5g28300
==============================================
MYC_MYB
--------->
TGA1a
--------->
ANAC46
<---------
TGA1a
<---------
O2
<---------
ETT(2)
--------->
ZAT2
--------->
ATERF1(1)
<---------
ZAT2
<------
NtERF2
--------->
ANAC58
<-----------
HVH21
------>
MYB83
------>
NtERF2
------>
MYB46(1)
--------->
DEAR3(1)
--------->
ORA47(1)
--------->
RAP2.3(3)
--------->
DREB2C(2)
--------->
RAP2.3(2)
----------->
HVH21
--------->
RRTF1(1)
<---------
ETT(1)
<---------
ATERF1(1)
--------->
DEAR4(1)
--------->
ERF1
--------->
DEAR3(1)
--------->
RAP2.3(1)
--------->
DEAR3(2)
--------->
ABI4(1)
--------->
RAP2.3(1)
------>
NtERF2
--------->
ORA47(2)
--------->
ANAC46
<---------
ATERF1(1)
--------->
ATERF1(1)
--------->
LBD16
<-----------
HVH21
------>
NtERF2
--------->
O2
<---------
DEAR3(1)
--------->
RAP2.6(2)
--
<---------
At4g35610
--------->
MYB46(3)
------->
GAMYB
---
--------->
At4g35610
--------->
DEAR3(2)
--------->
LBD16
<--
--------->
DEAR3(1)
<---------
ALFIN1
------>
NtERF2
<------
------->
TEIL
--------->
ANAC58
<---------
ATERF1(1)
<---------
DAG2
--------->
REM1(1)
<---------
YAB1
------>
NtERF2
----------->
HVH21
--------->
DEAR3(1)
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
ANAC46
<-----------
TGA1
--------->
ZAT2
--------->
MYB46(3)
-------
>
ZAT6
------>
ZmHOX2a(1)
--------->
ATERF1(1)
--------->
DEAR3(1)
<---------
ALFIN1
<---------
CCA1(2)
-
atcctttcctctt
atgaatctctccgccgaccaagctcccgtcaccgccgtcgacgaactagctccgccttctcaaccgcatcgcttatctacatcatgt
58400
<------
NtERF2
------>
NtERF2
<---------
ALFIN1
--------->
MYB46(3)
<---------
ATERF1(1)
--------->
LBD16
------>
NtERF2
--------->
ANAC58
--------->
DEAR3(1)
--------->
ANAC58
--------->
ANAC46
<---------
ATERF1(1)
<---------
ALFIN1
--------->
ARR14(2)
<---------
ARR14(2)
<---------
HSFB2a(2)
<---------
At4g35610
--------->
HSFB2a(2)
--------->
ARR14(2)
------>
NtERF2
--------->
ANAC46
<---------
ARR14(2)
--------->
ABI4(1)
<---------
ALFIN1
<---------
MYB52(1)
------->
GAMYB
--------->
At4g35610
------->
GLK1(1)
--------->
LBD16
--------->
RAP2.6(2)
--------->
DEAR3(1)
------>
ARR11(3)
<---------
LBD16
--------->
DEAR3(1)
------->
GAMYB
--------->
DEAR3(1)
-------
ARR11(3)
--------->
ARR14(2)
--------->
MYB46(3)
--------->
ANAC46
---
ANAC55(2)
<---------
ANAC58
<---------
RAP2.6(2)
<------
ZmHOX2a(2)
--------->
DEAR3(1)
-->
ANAC55(2)
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
ALFIN1
--------->
DEAR3(1)
----->
ZmHOX2a(2)
<---------
ARR14(2)
<----------
DOF2
--------------------->
WRI1
<<<<<
gatctccacccagaagagcgtttctccggtttctgtccttcttgtctttgcgaccgcctctccgtcttagatcacaacgccgctccgccaccgtcttctt
58500
------>
MYB83
<---------
HSFC1(2)
--------->
HSFC1(2)
<-
--------->
GLK1(1)
--------->
TOE2(3)
<--------
<---------
GLK1(1)
--------->
TOE1(3)
--------->
MYB52(1)
--------->
LBD16
----------->
GT1
--------->
ARR14(2)
<---------
HSFB2a(2)
<----------
DOF2
------->
GAMYB
----
--------->
ANAC46
<---------
MYB52(1)
--------->
MYB46(3)
<---------
DEAR3(2)
--------->
LBD16
--------->
LBD16
------>
MYB83
<---------
ARR14(2)
--------->
HSFB2a(2)
--------->
At4g35610
------>
ZmHOX2a(1)
--------->
ANAC58
<---
<---------
HSFB2a(2)
<---------
At4g35610
--------->
ANAC58
------>
MYB46(1)
<---------
MYB46(3)
--------->
HSFB2a(2)
<---------
LBD16
--------->
ANAC58
--------->
ANAC46
<-----------
HVH21
<---------
LBD16
<---------
CCA1(2)
---------->
DOF2
<-----------------
AGL1
--------->
ANAC58
------
<<<<
TBF1
------>
MYB46(1)
<---------
ANAC46
---------->
DOF2
<---------
ZAT6
--------->
MYB52(1)
------
cttcccggaaacctccctctatctccgctgtttcgttaaaagctctcttcaagccctcctctagtggtaccaacaactccaacggaaacggtcgggtcag
58600
---
<---
<---
-----
<----
-----
<----
<------
MYB46(1)
-----
------>
NtERF2
<------
MYB83
=====
--------->
DEAR3(1)
--------->
MYB55(2)
-----
--------->
GLK1(1)
===================================
<---------
GLK1(1)
<--------
P
<----
--------->
LBD16
<---------
MYB55(1)
<----
--------->
ANAC46
--------->
ALFIN1
=====
--------->
HSFB2a(2)
<---------
MYB52(1)
<----
<---------
HSFB2a(2)
--------->
LBD16
<----
<---------
ANAC58
<---------
LBD16
-----
<---------
ANAC58
<---------
SPL7
<---------
ARR14(2)
<----
--------->
LBD16
----------->
HVH21
--------->
ARR11(3)
<----
--------
LBD16
--------->
ZAT2
--------->
LBD16
<---------
ARR11(3)
------
---
HVH21
<---------
LBD16
<-------
TEIL
--------->
ANAC46
--------->
ARR14(2)
<------
----->
ARR14(2)
<---------
ZAT2
<---------
LBD16
<------
ZmHOX2a(1)
--------
------
ARR14(2)
--------->
At4g35610
<----------
DOF2
--------->
MYB52(1)
<---------
MYB46(3)
<---------
DEAR3(2)
----->
HVH21
<---------
At4g35610
------>
ZmHOX2a(1)
<---------
MYB52(2)
<---------
ALFIN1
--------
----->
ARR10
--------->
LBD16
---------->
DOF2
---------->
DOF2
<---------
GLK1(2)
----------->
RAV1(1)
<----
acccggtttcttcccggagctccgacgtacaaagtccttttccgcaaagaacaacgaaggattttccggtgggtttgagccacagcgtcggtcttgtgac
58700
Previous
Next
AGI:
At5g01170.1
Description:
glycine-rich protein. similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT3G09070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15781.1); contains InterPro domain Protein of unknown function DUF740 (InterPro:IPR008004)
Range:
from: 58161
to: 60135
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version