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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                    <---------ARR11(3)
                                                                    <---------ARR14(2)
                                                               <---------ZAT2
                                                               --------->ZAT2
                                                               <---------At4g35610
                                                               --------->At4g35610
                                                           --------->ALFIN1
                                                           <---------REM1(1)
                                                          <-------MYC2
                                                          ------->MYC2
                                                          ------->MYC3
                                                          <-------MYC3
                                                          ------->MYC4
                                                          <-------MYC4--------->KAN4(2)            <
                                                         <---------ANAC55(2)                       <
                                                         <---------TGA1a                       -----
                                                         <---------O2<---------GLK1(1)        <-----
  --------->HSFC1(2)          <---------At4g35610        --------->O2<----------TaMYB80     --------
  <---------HSFC1(2)          --------->At4g35610---------->DOF2    --------->ARR14(2)    <---------ATHB12
 --------->GLK1(2)  --------->DAG2               ==================bZIP_DOF             --------->YAB1
 <-----------ARR10 ================================================bZIP_DOF             --------->WOX13(1)
->DOF2             ---------->DOF2          <-------TEIL --------->TGA1a             --------->TOE2(3)
 
agagaagcttagccagtacaaataaagttgttcagaagaaaaacaaattcgtataagcacacgtgtagctggatattctcagcatttacattaatcaatc  57800
      --------->ANAC46
  <-----------GT1                          --------->CCA1(2)
---------AHL20(1)                       <---------TOE2(3)
---------ARR11(3)             --------->ARR11(3)
---->YAB1                   <---------TOE2(3)                                                      -
----ATHB12       --------->ICU4      <---------WOX13(1)            <---------WOX13(1)              <
->WOX13(1)      <---------TOE2(3)  --------->ATHB12             <---------YAB1--------->YAB1     ---
 
aatatatacacttcaatctaatgtttatattaagaaattgattgagatttgatagtttttgtatgttttgatggacaacaatgaaaaattgttgtccctc  57900
    <---------AHL20(2)
<---------ICU4                                                                                    --
--------->YAB1                                                                             ---------
<--------HAHB4                                                                          --------->TOE2(3)
-------->ICU4          <---------MYB52(1)                                  <------ZmHOX2a(2)    <---
---------ATHB12    <---------MYB52(1)          ----------->GT1   <------NtERF2-------->P--------->YAB1
------>YAB1      <---------MYB46(3)     ---------->DOF2--------->YAB1  <------ZmHOX2a(2)--------->TOE1(3)
 
taatcattttttttttttggctgttcgttttttttgtttttctcaaagaacagaaatatcagaatggcagagagatcgatcaacccattaaccataaaat  58000
                    <---------YAB1
                   <---------AHL20(2)
              <---------AHL20(1)
              --------->AHL20(1)                                                       ----------->RAV1(2)
              --------->AHL20(2)                                                  ----------->HVH21
             --------->YAB1                                                     --------->At4g35610
             --------->AHL20(2)                                              <---------AHL20(2)<----
<---------ZAT14    --------->AHL20(2)                                       --------->AHL20(2) -----
--------->ZAT14<---------YAB1                      --------->TOE2(3)      <---------ARR14(2)   <----
------->ANAC46<---------AHL20(2)         <-----------GT1              <---------ZAT18  <---------At4g35610
>AHL20(2)<---------YAB1  <-----------HVH21      <----------DOF2      <---------ANAC46  --------->At4g35610
--------GT1 <---------YAB1              <-----------GT1          ---------->DOF2<---------At4g35610
 
cacagcactgtttttattatattaaaattgtcagactcaatatttaaccttctttcttaaaaacaaaaaatagcgcagatttaatctgacacctgcaaaa  58100
            <---------AHL20(2)     --------->MYB52(1)
         <---------AHL20(1)    --------->AHL20(2)
         --------->AHL20(1)   --------->AHL20(2)
         --------->AHL20(2) --------->YAB1                                                 ---------
        <---------AHL20(2) <---------AHL20(2)                                              ---------
     <---------AHL20(2)<---------AHL20(2)                                               <----------ID1
    --------->AHL20(2) --------->AHL20(2)                                         <------MYB46(1)
  --------->TOE2(3)  --------------->AGL15      <-----------GT1                   <------MYB83
<---------AHL20(2)   <---------------AGL15<---------MYB46(3)                    <---------MYB52(1)
-----AHL20(1)        <----------DOF2    <---------MYB52(1)    <----------DOF2  <-------GAMYB
---->AHL20(1) <---------AHL20(2)   <-----------GT1          *TSS    <----------DOF2   ---------->DOF2
-----ARR11(3)--------->AHL20(2)<---------AHL20(2)        <---------At4g35610  <---------MYB46(3)
 
tatttcattaaatattttaaatttctttaaataataaataactgtttgttatttctcttcatctcctttctctttcaatgtccgttggtaaaagacgaaa  58200
                                             --------->At4g35610
                                             <---------At4g35610--------->CCA1(2)
                                          ---------->DOF2    <---------YAB1
                                    --------->ANAC58--------->ANAC46
                     <---------CCA1(2) --------->WOX13(1)  --------->YAB1
>ANAC58   <---------ARR11(3)        --------->ANAC58--------->ANAC58                       ---------
>ANAC58   --------->ARR11(3)        --------->ANAC46--------->ANAC58          ---------->DOF2
 
gtttcagacataacatctcttcccatctctctcccctctaagcaattaagcagacaagacactgatgatatgagacgaagagaaagaagtcttatcactc  58300
                                               --------->DEAR3(1)
                                       <---------At5g28300
                                   ==============================================MYC_MYB
                                   --------->TGA1a
                                   --------->ANAC46
                                   <---------TGA1a
                                   <---------O2<---------ETT(2)
                              --------->ZAT2  --------->ATERF1(1)
                              <---------ZAT2  <------NtERF2
                             --------->ANAC58<-----------HVH21
                             ------>MYB83    ------>NtERF2
                             ------>MYB46(1)--------->DEAR3(1)
                        --------->ORA47(1)  --------->RAP2.3(3)
                       --------->DREB2C(2)  --------->RAP2.3(2)
                       ----------->HVH21   --------->RRTF1(1)
                       <---------ETT(1)<---------ATERF1(1)
                       --------->DEAR4(1)  --------->ERF1
                       --------->DEAR3(1)  --------->RAP2.3(1)
                      --------->DEAR3(2)  --------->ABI4(1)
                      --------->RAP2.3(1) ------>NtERF2
                      --------->ORA47(2) --------->ANAC46
                     <---------ATERF1(1)--------->ATERF1(1)
                     --------->LBD16<-----------HVH21
                     ------>NtERF2 --------->O2<---------DEAR3(1)        --------->RAP2.6(2)      --
                     <---------At4g35610--------->MYB46(3)               ------->GAMYB           ---
                     --------->At4g35610--------->DEAR3(2)    --------->LBD16                    <--
                    --------->DEAR3(1)<---------ALFIN1        ------>NtERF2                  <------
             ------->TEIL    --------->ANAC58<---------ATERF1(1)<---------DAG2          --------->REM1(1)
          <---------YAB1------>NtERF2----------->HVH21       --------->DEAR3(1)         --------->ANAC46
------>ZmHOX2a(1)   --------->ANAC46<-----------TGA1     --------->ZAT2 --------->MYB46(3)   -------
>ZAT6------>ZmHOX2a(1)--------->ATERF1(1)--------->DEAR3(1)  <---------ALFIN1     <---------CCA1(2)-
 
atcctttcctcttatgaatctctccgccgaccaagctcccgtcaccgccgtcgacgaactagctccgccttctcaaccgcatcgcttatctacatcatgt  58400
                                                                                      <------NtERF2
                                                                                     ------>NtERF2
                                                                                    <---------ALFIN1
                                                                                   --------->MYB46(3)
                                                                                  <---------ATERF1(1)
                                                                                  --------->LBD16
                                                                                  ------>NtERF2
                                                                                 --------->ANAC58
                                                                                 --------->DEAR3(1)
                                                                                 --------->ANAC58
                                                                                 --------->ANAC46
                                                                               <---------ATERF1(1)
                                                                              <---------ALFIN1
                                                                              --------->ARR14(2)
                                                                              <---------ARR14(2)
      <---------HSFB2a(2)                                                    <---------At4g35610
      --------->HSFB2a(2)--------->ARR14(2)                                  ------>NtERF2
    --------->ANAC46     <---------ARR14(2)                                  --------->ABI4(1)
  <---------ALFIN1      <---------MYB52(1)        ------->GAMYB              --------->At4g35610
------->GLK1(1)        --------->LBD16            --------->RAP2.6(2)       --------->DEAR3(1)
------>ARR11(3)      <---------LBD16              --------->DEAR3(1)      ------->GAMYB--------->DEAR3(1)
-------ARR11(3)  --------->ARR14(2)              --------->MYB46(3)      --------->ANAC46
---ANAC55(2)  <---------ANAC58                <---------RAP2.6(2)  <------ZmHOX2a(2)--------->DEAR3(1)
-->ANAC55(2)  <---------ANAC58    ------>ZmHOX2a(1)  <---------ALFIN1    --------->DEAR3(1)
----->ZmHOX2a(2) <---------ARR14(2)       <----------DOF2     --------------------->WRI1       <<<<<
 
gatctccacccagaagagcgtttctccggtttctgtccttcttgtctttgcgaccgcctctccgtcttagatcacaacgccgctccgccaccgtcttctt  58500
          ------>MYB83
      <---------HSFC1(2)
      --------->HSFC1(2)                                                                          <-
     --------->GLK1(1)        --------->TOE2(3)                                            <--------
     <---------GLK1(1)        --------->TOE1(3)                                   --------->MYB52(1)
  --------->LBD16            ----------->GT1                                     --------->ARR14(2)
 <---------HSFB2a(2)    <----------DOF2                                        ------->GAMYB    ----
 --------->ANAC46      <---------MYB52(1)                            --------->MYB46(3)  <---------DEAR3(2)
 --------->LBD16      --------->LBD16                               ------>MYB83 <---------ARR14(2)
 --------->HSFB2a(2)  --------->At4g35610              ------>ZmHOX2a(1)      --------->ANAC58  <---
<---------HSFB2a(2)   <---------At4g35610      --------->ANAC58     ------>MYB46(1)      <---------MYB46(3)
--------->HSFB2a(2) <---------LBD16            --------->ANAC58    --------->ANAC46   <-----------HVH21
<---------LBD16<---------CCA1(2)  ---------->DOF2    <-----------------AGL1   --------->ANAC58------
<<<<TBF1  ------>MYB46(1)    <---------ANAC46---------->DOF2<---------ZAT6  --------->MYB52(1)------
 
cttcccggaaacctccctctatctccgctgtttcgttaaaagctctcttcaagccctcctctagtggtaccaacaactccaacggaaacggtcgggtcag  58600
                                                                                                 ---
                                                                                                <---
                                                                                                <---
                                                                                               -----
                                                                                               <----
                                                                                               -----
                                                                                               <----
                                                                   <------MYB46(1)             -----
                   ------>NtERF2                                   <------MYB83                =====
                  --------->DEAR3(1)                              --------->MYB55(2)           -----
              --------->GLK1(1)                                  ===================================
              <---------GLK1(1)                                  <--------P                    <----
          --------->LBD16                                        <---------MYB55(1)            <----
          --------->ANAC46                                       --------->ALFIN1              =====
         --------->HSFB2a(2)                                    <---------MYB52(1)             <----
         <---------HSFB2a(2)                                   --------->LBD16                 <----
     <---------ANAC58                                        <---------LBD16                   -----
     <---------ANAC58 <---------SPL7                    <---------ARR14(2)                     <----
--------->LBD16   ----------->HVH21                     --------->ARR11(3)                     <----
--------LBD16 --------->ZAT2           --------->LBD16  <---------ARR11(3)                    ------
---HVH21 <---------LBD16<-------TEIL  --------->ANAC46  --------->ARR14(2)                   <------
----->ARR14(2)<---------ZAT2         <---------LBD16   <------ZmHOX2a(1)                    --------
------ARR14(2)--------->At4g35610<----------DOF2--------->MYB52(1)<---------MYB46(3) <---------DEAR3(2)
----->HVH21   <---------At4g35610------>ZmHOX2a(1)<---------MYB52(2)        <---------ALFIN1--------
----->ARR10--------->LBD16---------->DOF2---------->DOF2<---------GLK1(2)   ----------->RAV1(1)<----
 
acccggtttcttcccggagctccgacgtacaaagtccttttccgcaaagaacaacgaaggattttccggtgggtttgagccacagcgtcggtcttgtgac  58700
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AGI:  At5g01170.1   
Description:  glycine-rich protein. similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT3G09070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15781.1); contains InterPro domain Protein of unknown function DUF740 (InterPro:IPR008004)
Range:  from: 58161    to: 60135    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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