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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                      ---------->DOF2
                                     <------NtERF2
                                    --------->LBD16
                                   --------->RAP2.6(2)
                                   --------->LBD16
                                  <------NtERF2
                                  <---------LBD16
                                 ------>NtERF2
   <---------At4g35610           <---------RAP2.3(1)
   --------->At4g35610          <---------O2
  --------->GLK1(2)             --------->bZIP60(1)
  --------->ARR14(2)            <---------bZIP60(1)
  <---------ARR14(2)         --------->ALFIN1                                   <---------REM1(1)
 <---------GLK1(1)           ----------->TGA1                                <---------MYB46(3)
------->ANAC58               ----------->HVH21                              <---------ATHB12
------->ANAC58         <---------ANAC46         <---------YAB1          <---------ATHB12
------AtLEC2         --------->MYB52(1)         <---------TOE2(3) ----------->GT1         --------->ZAT14
-SPL7       <---------HSFB2a(2) <---------bZIP60(2) ----------->GT1   --------->WOX13(1)  <---------ZAT14
 
cagggaatctgagttcaagaagagtaacgggagtgacgccggaaagagattaagattgaaaatagaagaatgtaaatcaatggttgtagagactgtagtt  17988700
                                                                                               <----
    <---------ANAC58                                                                           -----
    <---------ANAC58                                                                        ------>ZmHOX2a(1)
<---------ANAC58                      ----------->RAV1(1)                                  ---------
<---------ANAC58             ----------->GT1                                               ---------
<---------ANAC46         ------->TEIL<----------ID1     <---------ANAC46            <---------ATHB12
 
gtttcttgtttgtctgactacgaagacgaatgtggtaatagcaacaagaatgttatcttatgtggagttttgaaatgttgttaacaaatcaattccttag  17988800
                                                                                            --------
                                                                                            <-------
                                                                               <---------ICU4
                                                                     <---------WOX13(1)     <-------
                                                                    <---------ANAC58    <---------ICU4
                                                             <---------CCA1(2) --------->YAB1
-----At4g35610                                              <-----------HVH21 <---------ATHB12
---->At4g35610    <---------GLK1(2)                     -------->P  <---------ANAC58    --------->ATHB12
>TOE2(3)          --------->ARR11(3)           ------->TEIL--------->ANAC46<---------AHL20(2)    ---
>TOE1(3)        --------->ICU4    ------>ZmHOX2a(1)     --------->MYB52(1)--------->AHL20(2)--------
 
ctcatttaccaagtttacaaagattatggtccaagtcctaaaactgaatgaacatcacatacccgtctcttgagtgatttaatcatgttcttcattgcac  17988900
                                                                                       --------->DAG2
                                                                                   <---------AHL20(2)
                                                                                   --------->AHL20(2)
 <----------ID1                                                                 --------->YAB1
->ZAT18                                                                        <---------YAB1
--ZAT14                                                               ------------>CBF---------->DOF2
--ZAT18 <----------DOF2                                    <---------TOE2(3)   <---------AHL20(2)
------->DOF2                                              ---------->DOF2   <---------AHL20(2)
->ZAT14 <---------DAG2       <---------YAB1           <------ZmHOX2a(1)    --------->AHL20(2) ------
 
taaagcgacaacttttggttcaaatatagactatgactatatggtttgttttgcacaggattaaagttgatgttccaattttataattaaaaagtcagaa  17989000
                                              <---------LBD16
                                            <---------REM1(2)
                                          --------->bZIP60(1)
                                          <---------bZIP60(1)
                               --------->ANAC46--------->ANAC58                   <---------DEAR3(1)
                               --------->ANAC58--------->ANAC46               <---------At4g35610
                               --------->ANAC58--------->ANAC58               --------->At4g35610
                   <---------ANAC58       ----------->HVH21              <---------At4g35610
                   <---------ANAC58       --------->ANAC58           <---------MYB52(1)
     <---------ANAC58     <---------YAB1  --------->ANAC58         <---------ANAC58
     <---------ANAC58  ---------->ID1    --------->SPL7     *TSS   <---------ANAC58 <------NtERF2
---->DOF2        <-----------GT1   --------->MYB52(1)   ---------->DOF2  --------->At4g35610
 
aggggttttcttgttattttttacttgttcttataagctatcgggacgacacggagttttaaagagttttccgttttgctgagcggaggcgagagagggt  17989100
                                         --------->RAP2.6(2)
                                 --------->LBD16
                                <---------ANAC55(2)
                                --------->HSFB2a(2)
                                --------->ANAC46
                                --------->ANAC55(2)                    <---------HSFC1(2)
                               <---------LBD16                      <------NtERF2
                             --------->ARR14(2)                   <---------LBD16
                  <---------ANAC58     --------->At4g35610        <---------ANAC46
                  <---------ANAC58   --------->MYB46(3)           --------->ETT(1)
                  <---------ANAC46  ---------->DOF2             <-----------HVH21
                 <---------LBD16<---------HSFB2a(2)          <---------ANAC58             --------->MYB52(1)
                --------->MYB52(1) --------->ARR14(2)        <---------ANAC58             <---------ARR14(2)
           ---------->DOF2   <---------ARR14(2)         <---------ANAC58          ---------->DOF2
     <---------REM1(1)      --------->WOX13(1)          <---------ANAC58   <---------ANAC46       <-
 
ttagagtgatggagcaaagtagcgggagagtcaatccggaacagccgaacaacgtcttggcgagccttgtcgggagcatcgtggagaaaggaatatcgga  17989200
                                                                                 --------->ANAC58
                                                                                 --------->ANAC58
                                                                                --------->SPL7
                                                                               <---------MYB52(1)
                                                                              --------->LBD16
                                                                             <---------ANAC55(2)
                                                                             --------->ANAC55(2)
                                                                             --------->ANAC46
                                                                             --------->ANAC58
                                                                             --------->ANAC58
                       --------->ANAC46                                      --------->ANAC55(1)
                 <---------ATERF1(1)                                      ------->TEIL
                 --------->At4g35610                                    ----------->HVH21
             --------->ANAC46                                          --------->ANAC58
             --------->ANAC58                                          --------->ANAC58
             --------->ANAC58                             ----------------------->TaNAC69(2)
         --------->AtLEC2                                --------->ANAC58 <---------ARR14(2)
         --------->ANAC58                          <-----------HVH21   --------->ANAC46    ---------
         --------->ANAC46       <---------ALFIN1  --------->O2         --------->ANAC55(2) <--------
         --------->ANAC58<---------ALFIN1         --------->ANAC46    <---------LBD16--------->WOX13(1)
--------KAN4(2) --------->RAP2.6(2)     <----------DOF2  --------->ANAC58 --------->ARR14(2)   -----
 
gaataagcctccaagcaagccgcttcccccaaggccctcccttctttccttccccgtcgctcgtcatcgttctcacggacccgtaagccaatccaatcct  17989300
       <---------DAG2                         <---------ARR11(3)
       <----------DOF2                     <---------HSFB2a(2)
  <---------ANAC58                 <---------ANAC58
  <---------ANAC58                 <---------ANAC58
  <---------ANAC46              ---------->ID1<---------GLK1(2)
>ARR14(2)                  <----------DOF2 --------->HSFB2a(2)  <-----------RAV1(1)                -
-ARR14(2)   <---------TOE2(3) <-----------RAV1(1)      ------->TEIL                              <--
->ZmHOX2a(1)<---------TOE1(3) <---------MYB46(3)   <-----------GT1<---------MYB52(1)            <---
 
ctagtgcgtgctttttaggtttccatcttccttttgttgccttcttctagattttaagcaccttctactgttgtttagtacttgggactccacaattttt  17989400
                                                                                        --------->At4g35610
                                                                                       ----------->RAV1(1)
     ----------->HVH21                                                               <---------At4g35610
   ----------->RAV1(2)                                                               --------->At4g35610
   <---------ANAC58                                                               <XXXXXXXXXXXXXXXXX
   <---------ANAC58                                                          ------>ZmHOX2a(1)
-------->DEAR3(1)     <----------DOF2                          ---------->ID1<-----------RAV1(1)
-------At5g28300    <---------At4g35610            <---------YAB1          ----------->RAV1(2)
--------GT1         --------->At4g35610           <---------TOE1(2)        ========================RAV
 
caccgtgcctgaccttgtaattcagctttctgagacatctaatttttgtttctcatgtttgattttgtagcatttggctcctgtgggaagcagcatagca  17989500
     <------ZmHOX2a(1)
     <---------ICU4
     =====================HOX2a_HOX2a
    --------->ICU4                 --------->At4g35610------->TEIL
   <---------TOE2(3)       >>>>>>>>>TBF1           <---------YAB1
  --------->MYB52(1)   <------ZmHOX2a(1)    <---------HSFB2a(1)                                -----
--------->TOE2(3)  <------ZmHOX2a(2)  --------->At4g35610                              <----------DOF2
XXXMIR779.1   --------->YAB1  >>>>>>>>>TBF1 --------->HSFB2a(1)          <----------DOF2  ----------
 
caacctaaggattacaatgacgatcaggaagaagaagaagcagaagaacgtttcatgaatgcagactccattgctgcttttgctaaaccgcttcaaagaa  17989600
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AGI:  At4g38430.1   
Description:  ATROPGEF1/ROPGEF1 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/ protein binding. Identical to Rop guanine nucleotide exchange factor 1 (ROPGEF1) [Arabidopsis Thaliana] (GB:Q93ZY2;GB:Q9SVE2); similar to ATROPGEF7/ROPGEF7 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor/ [Arabidopsis thaliana] (TAIR:AT5G02010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47505.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512)
Range:  from: 17986460    to: 17988801    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At4g38440.1   
Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN83259.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61853.1); similar to hypothetical protein OsI_022655 [Oryza sativa (indica cultivar-group)] (GB:EAZ01423.1); contains InterPro domain RNA polymerase II-associated protein 1, N-terminal (InterPro:IPR013930); contains InterPro domain RNA polymerase II-associated protein 1, C-terminal (InterPro:IPR013929)
Range:  from: 17989061    to: 17994717    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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