Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ANAC58                                                                  --------->ANAC58        ------->MYC3                                                                  --------->ANAC46        <-------MYC4   ------->TEIL                                                 <-----------GT1           <-------MYC3   --------->SPL7                                            <---------ARR14(2)           <-------MYC2   <-------TEIL                                              --------->ARR14(2)           ------->MYC2 <---------SPL7                                           <---------ANAC58         <----------DOF2 ---------ANAC58                                          <---------ANAC46      ------>ZmHOX2a(2) ---------ANAC58                           <---------YAB1 --------->ANAC55(2)  <---------GLK1(1) ---------ANAC46                      <---------MYB52(1)  <---------ANAC58     <------ZmHOX2a(2) -----ANAC58         <----------DOF2<---------ANAC58    <<<<<<<<<<AtWER        --------->GLK1(1) -----ANAC58  <---------ARR11(3)    <---------ANAC58  <---------ANAC58        <---------ARR11(3) -GLK1(1)  <---------ALFIN1      <----------DOF2      <---------ANAC58        --------->ARR11(3)   ctgcgtacgtcttccacatcttcctttgatatcaactttcgttttgttatagacttgcatgcgtattcacgccctgttgagatctctttgcacatgtaag  17930800                                                                                                 <---                                                     <---------ANAC58                            ----                                                     <---------ANAC58                           -----                                                     <---------ANAC46                          ------                                                    --------->ATHB12                         <-------                                              <---------LBD16                                --------                 -------->ZAP1               ------>ZmHOX2a(2)                              ---------               <---------WRKY18(1)          <------ZmHOX2a(2)                             --------->PCF2              ----------->HVH21            --------->ARR11(3)                          <------MYB46(1)              --------->WRKY12             <---------ARR11(3)                          <------MYB83             ------>ZmHOX2a(1)             --------->ARR14(3)                       <---------ANAC58       <------------AtMYB77               <---------GLK1(1)   <----------DOF2       <---------ANAC58   tcgtcccaaactgtccttgacctagtttgtgtcccaacgagtagagatctcggatgcttggggtcttttgaccaagaacatagcaggcttggttcccacc  17930900                            <---------ANAC58                            <---------ANAC46                           <------NtERF2                           --------->ATERF1(1)                          <---------ATERF1(1)                          ------>NtERF2                         <---------DEAR3(1)              <---------ANAC58      --------->ATHB12   <---------RAP2.3(3)    <----------DOF2   ------>ZmHOX2a(1) ------At4g35610     <---------LBD16                       <---------ATHB12 ----->At4g35610    ----------->RAV1(2)         --------->At4g35610                                -- ---->DEAR3(1)<---------ANAC58                <---------ZAT14                                   ----- --->MYB46(3) <---------ANAC46  <----------DOF2 <---------At4g35610                           <------ --ALFIN1<-----------RAV1(1)<---------ANAC58  --------->ZAT18                                 <------ ->ANAC46=======================RAV          <---------ANAC58                                 <------ >MYB46(3) <---------RAP2.6(2)<------NtERF2  <---------ANAC58      <----------ID1      <---------MYB46(3)   gctgtgcttcattgtggcttcttcctgggggcgtcttttgccagtttgtgtgctgaaacaaatcgttgaaagacaaaatgtattagaagtggtttggctt  17931000                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                  <--                                            ------>MYB46(1)                                       <--                                            ------>MYB83                                          ---                                          --------->DEAR3(1)                        --------->ANAC58                                          --------->AtMYB61             <------ZmHOX2a(1)         ---                                          <---------ALFIN1              ============================= -------->DOF2                           <---------At4g35610            ============================= ------>GT1                              --------->At4g35610         --------->At4g35610          <-- ---ANAC58                             <-----------GT1           <-----------HVH21  --------->ANAC58- ---ANAC46                            <---------ZAT18           <---------------AGL15             --- ---ANAC58                         --------->MYB59             ----------------->AGL1           -----   gtaaagaattgcccatcaaacaaatcccttaccaagttagttcacctccccttccaaattagtttgccatcagaggaaaacagagcaagtcccatagcaa  17931100           <-----------GT1       --------->TOE2(3) ------->CCA1(2) -----ZmHOX2a(2) ------>AGP1 -------ARR14(2) -------AGP1 -------ARR14(3) ------>ARR11(3) ------>ARR14(3) ======HOX2a_HOX2a                                                                     --------->ZAT18 =====HOX2a_HOX2a                      --------->YAB1                                 --------->ALFIN1 -------ARR11(3)                      <---------ATHB12                               --------------->AtSPL8 ----->ZmHOX2a(2)        ---------->DOF2     <------ZmHOX2a(1)                --------->CCA1(2) ------>ARR14(2)      --------->YAB1  --------->ICU4                        *TSS   ------->TEIL    -- ------>ARR10   ------->TEIL          <---------ATHB51                   <------ZmHOX2a(1)      -----   gatctgaaacattatacgaatttagcataaagaaatcgcaataataaggagagacatcaaaacaggggaattagaggaagagatggatgtgtaccagaca  17931200                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                        --------->ARR14(1)                                        --------->CCA1(2)                               <-----------TGA1                                       --------->AGP1                                  --------->TGA1a                                       --------->ARR14(2)                              ==============                                       <---------ARR14(2)                            ------>NtERF2                                      <---------At4g35610                           --------->DEAR3(1)                                      <---------GLK1(1)                          --------->ANAC58                                     ----------->ARR10                           --------->ANAC46                                   <---------ZAT18                               --------->ANAC58                                <------MYB83                                <---------GLK1(2) <---------YAB1                 <------MYB46(1)                             --------->ARR14(2) ------->YAB1                 <---------WOX13(1)     <------------CBF      --------->KAN4(1) <------- ----->DOF2                  <------------CBF   --------->CCA1(2)      ------------>CBF--------->O2 -   aagatgataagaatggatgaaaattaagtcagattggtgcagatccgatgatacacattgttgaacatggttttgcaatattctcgccaacgtctccaca  17931300                                        --------->YAB1         <---------AHL20(2)                                     --------->YAB1            --------->AHL20(2)                           <---------ARR11(3)                <----------DOF2                           --------->ARR11(3)                --------------->AGL15                          <---------RVE1(1)                  <---------------AGL15                          <---------CCA1(1)           ------>ZmHOX2a(2)                          --------->RVE1(1)         --------->ARR11(3)                          --------->CCA1(1)         --------->ARR14(2)   --------->KAN4(2)          -                          --------->GLK1(1)         <---------ARR14(2)  --------->KAN4(1)           -                          <---------GLK1(1)         <---------ARR11(3)  <---------KAN4(1)   ---------        --------->YAB1   <---------ARR11(3)         --------->AGP1      <---------HSFB2a(1) <-------- =========================bZIP_DOF <---------WOX13(1)<------ZmHOX2a(2)  --------->HSFB2a(1)--------->ARR14(2) --ALFIN1      ---------->DOF2<----------DOF2       <---------AGP1     <---------KAN4(2)   <---------ARR14(2) ----->ZmHOX2a(1)        --------->ARR11(3)    ----------->RAV1(1) --------->YAB1    <-----------RAV1(2)   tcctgactaaaaataacaaaagaagaagatatctttgattaatagtcatcaacagatctgtctctttaattagaatattctaaaaatgcaggggaactcc  17931400                                                                            -------->HAHB4                                                                            --------->YAB1                                                                            <---------ICU4                                                                          <---------TOE2(3)                                                                         --------->YAB1             -                                                                      <----------DOF2        --------      <----------DOF2                                     --------->At4g35610  ------>ZmHOX2a(2)    - -------->ANAC58                         <---------ARR11(3)          --------->TOE1(3)      <-------- -------->ANAC58                         --------->ARR14(3)     <---------MYB52(2)          --------- >GLK1(1)                                --------->ARR11(3)     --------->MYB46(3)          <-------- -GLK1(1)                           <---------ATHB12<-----------HVH21--------->TOE2(3)  <------NtERF2   acaaggctcttttcttaggcctacttcacatgagacaaatcaagacctccaattggtcgcatcggaacaaacctttaatgatcccatggcctcagattct  17931500                                                                                            ---------                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                       --------->ANAC46     ----------->GT1                                                                   <---------ANAC55(2)   <---------ANAC46                             --------->ANAC58                       --------->ANAC55(1) --------->MYB52(1)                    <---------WOX13(1)                              --------->ANAC55(2) ---------->HVH21                    --------->ATHB12                              ----------->RAV1(1) ->GLK1(2)                        <---------ANAC58                              --------->ANAC58 -------->WRKY12                  <---------ANAC58       ----------->GT1        --------->ANAC58----- -ARR14(2)                        <---------ANAC46  ---------->DOF2        <----------DOF2  --------- >ARR14(2)                      --------->ZAT18 --------->ANAC46     <-----------GT1 <---------ALFIN1 -GLK1(2)                <-----------HVH21      --------->ANAC58---------->DOF2 --------->ANAC46<----   agttgacgggttataccagagaagatgggtcgagtgccttgattggctactcgccaaagatgtaataaaagttacttctttgaagcaacacgcattattt  17931600                         --------->ANAC58                         --------->ANAC58                     --------->ZAT6                    <---------ZAT18                    --------->ZAT18               --------->CCA1(2) >AHL20(2)    <---------ARR11(3)                  <----------ID1 ---------->AtSPL8  --------->ZAT14             --------->ALFIN1          --------->ATHB12 >ATHB51      --------->ARR11(3)    --------->ANAC58                     --------->ICU4 -----------AtSPL8  <---------ZAT14 --------->ANAC58               --------------------->WRI1    ----   agtacatgtttgaagagatatgtacactagcaatagagaagccaaaacaagtgggacgaagaaaaactgcatagaatgatttgcattcgtataagttacc  17931700  Previous    Next  AGI:  At4g38230.1    Description:  CPK26 (calcium-dependent protein kinase 26); calmodulin-dependent protein kinase/ kinase. similar to CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G17290.1); similar to calcium dependent protein kinase (GB:AAC49405.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 17928671    to: 17931176    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g38240.1    Description:  CGL1 (COMPLEX GLYCAN LESS, N-ACETYLGLUCOSAMINYLTRANSFERASE I); transferase, transferring glycosyl groups. similar to N-acetylglucosaminyltransferase I [Nicotiana tabacum] (GB:CAC80702.1); similar to alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Nicotiana tabacum] (GB:CAB53347.1); similar to N-acetylglucosaminaltransferase I [Nicotiana tabacum] (GB:CAC80701.1); contains InterPro domain Glycosyl transferase, family 13; (InterPro:IPR004139) Range:  from: 17931564    to: 17935319    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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