Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     ---------->DOF2 --MYB46(1) -----MYB46(3)                        --------->AtMYB61 --MYB83 --------->ALFIN1      <---------ANAC46                                                 ----- ----AtMYB61                 <----------DOF2                ----------->HVH21                  ------ ---RAV1(1) ----------->GT1<---------At4g35610         <-------TEIL         <---------YAB1     ------   gtcgtgaaagagtgtggaaaaatgtattgagcttcttggacctctcccactattgagttcatgtgaaactgttgaattatgctattttcttctatttcct  17797500                           <----------ID1                             <-------TEIL                         <---------------AtSPL8              ----------->RAV1(1)                        ---------->DOF2                --------->At4g35610                         <-             --------->ANAC46                        <---------HSFB2a(2)                        -----    <-----------GT1----------->GT1                   <-----------RAV1(2)                        <---- ->ZmHOX2a(1)--------->ANAC58                        --------->HSFB2a(2)                       <----- --->TOE2(3) --------->ANAC58                        ====================RAV              <---------LBD16 --------->AGL15 ---------->DOF2         --------->YAB1<---------At4g35610      ------->TEIL---------   aaaatataacatcacacccaaaagaaaaaagaacaaaaaacaatgaaaaacagtcccagatgacaacatatatacatgagtgtatgtgtttatgcgcata  17797600                                              <---------ANAC58                                          <-------GAMYB                                          <---------At4g35610                                   <---------ICU4         <---------------AGL15                                   --------->ATHB12       --------------->AGL15                                  <---------YAB1         <-----------------AGL2                              <---------GLK1(2)        <---------ARR11(3)    --------->ZAT2            <---------ARR11(3)       <---------ARR14(2) ----------GT1                --------->ARR11(3)       --------->GLK1(2)                           -- ---->ARR14(2)                <---------ARR14(2)       --------->ARR11(3)                          -- -----ARR14(2)                --------->ARR14(2)       --------->ARR14(2)              --------->ATHB12 ----CCA1(2)                ----------->ARR10 <---------ANAC58                <---------YAB1       -- >LBD16               <---------ANAC46   <-----------RAV1(1)     ----------->GT1      <---------YAB1   tatacctgctcagaaaaccatcttgtggataagatactcattgctgttgcctctgaaaatctgaaaatggtaaaaagaatattagtgtatgatttataaa  17797700                                                                         ----------->GT1                                               <---------ANAC58     <---------ANAC46                                      --------->ARR11(3)            <---------ANAC58                         ----------->GT1       <---------ANAC58     <---------ANAC58       --------->ANAC58            <-----------GT1 --------->AHL20(2)<---------TOE1(2)    <---------TOE2(3)       --------->ANAC58  --------->GLK1(2)     ----------->GT1<------ZmHOX2a(2)         ----------->HVH21      <------ZmHOX2a(2) ------->ANAC58       ---------->DOF2 --------->ARR14(2)       --------->CCA1(2)       <---------ARR11(3) ------->ANAC58  --------->ANAC58     <---------ARR14(2)      --------->ARR14(2)       --------->ARR11(3) ------->ANAC46  --------->ANAC58     <---------ARR11(3)      <---------ARR11(3)  --------->TOE1(2)   caagaaactgtatttaaccaagaaaaaagataaattagcagatcatcttgggtttcaaatacaagatttgacgtatagtaaaaacccaagatcaagaaac  17797800                                                             <------ZmHOX2a(1)                                                          <---------HSFC1(1)                                                          --------->HSFB2a(2)                                                          <---------HSFB2a(2)                                                          --------->HSFC1(1)                                                       <----------DOF2                        *TSS                                  ---------->DOF2     <---------GLK1(2)                  <---------ANAC58                  <---------TOE2(3)                  <---------ZAT2                      <---------ANAC58            <---------TOE2(3)  --------->YAB1        --------->ZAT2                      <---------ANAC46   atttagtaagggttgagatttatgttttttgaatcacaaagaaataaaactcaccagcttctaggagaagagagagagagaagagagatttgtgtgtgaa  17797900                                                                             ------------>CBF                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                         ---------->DOF2                                                                    <-------MYC4                                                                    <-------PIF5                                                                    ------->MYC2                    --------------->AtSPL8                          <-------MYC2                    <---------------AtSPL8                          ------->PIF5                  <---------ARR14(2)                                ------->PIF4                  --------->ARR14(2)                                ------->MYC4              <-------TEIL                                          <-------PIF4            <-------MYC3                                            <-------MYC3            ------->MYC3                                            ------->MYC3            ------->PIF4                                           =================bZIP_DOF            <-------PIF4                                           =================bZIP_DOF            <-------MYC4                                           <---------TGA1a            <-------MYC2                                           --------->TGA1a            ------->PIF5       <-----------TBP                     --------->O2            <-------PIF5      ------->TEIL                         <---------O2                  ----            ------->MYC2------->TEIL                             <------------OsbHLH66--------->ANAC46          ------->TEIL  <-------TEIL                    ----------->GT1----------->HVH21    <--------   aacagtggaatgcacatgcatatatgtacatgtatatatagagatggacacacatatgaagtaatttgcacgtgtgaaaggcaatactactcaactttca  17798000                                                            <---------GLK1(2)                                                      <---------YAB1                                                      <---------AHL20(2)                                                   --------->AHL20(1)                                                   <---------AHL20(1)                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                              <---------AHL20(1)     <---------AHL20(1)                       <---------AHL20(2)     --------->AHL20(1)                       --------->AHL20(2)                          <---------MYB46(3)     <---------ARR11(3)                       --------->AHL20(1)                         <--------P     --------->ARR11(3)        <---------ANAC58   --------->AHL20(2)                  <---------TOE2(2) ----->ZAT6                    <---------ANAC46   <---------AHL20(2)                  <---------TOE1(2) --DOF2     <----------DOF2    <---------ANAC58   --------->YAB1     <---------YAB1<-----------GT1  <   cactaaaaatattccttttttctcacagcatttgggtgtcaaaactaattaattatattatagattgttttatatttgtcaaatttcacaggttgttcaa  17798100                                                                <------NtERF2                                                               <---------ATERF1(1)                                                               --------->LBD16                                                               <------NtERF2                                                              <---------ANAC46             <---------ARR14(2)                              <---------LBD16             --------->ARR14(2)                            <---------SPL7          <---------ANAC58                                 ------>NtERF2          <---------ANAC46                               <---------ANAC58          <---------ANAC58                               <---------ANAC46                    --------         <---------TOE2(3)                      <---------AHL20(2)            <---------ARR14(2)      <---------WOX13(1)                   ------->TEIL  <---------ANAC58     --------->ARR14(2)    --------->ATHB12                  <---------AtLEC2  <---------LBD16 --------->DAG2       <------- -----------GT1                 ------>ZmHOX2a(1)   <-----------RAV1(1)---------->DOF2       --------   agttactcattgacgtatacagtattttgaggtcctatttgaatgaatataaaaatgttgcgggccggagacaaaaagggtattcgtctattgaatatat  17798200                     <---------ANAC46                     <---------ANAC55(1) ->AHL20(1)    <---------AHL20(2)                                       <---------AHL20(2) --ARR11(3)    --------->AHL20(2)<---------TOE2(3)                     <---------YAB1 ->ARR11(3)    <---------YAB1    <---------TOE1(3)     --------->AHL20(2)   caggtttttgagtttatattattaagtgtatttttagggtttcttcttagaaacaaaaaaaatcgcctcaatttttattttgttttgatatatgtttact  17798300                                                                                                    <                                                                                                   <-                                                                                                 ----                              <---------AHL20(1)                                             <-------                           --------->AHL20(2)                                              <---------                           <---------AHL20(2)                                              ------->TEIL                   <---------YAB1             <---------ICU4      ------->TEIL          --------->ANAC55(2)          <---------MYB52(1)  --------->AHL20(1)  <-------TEIL  <-------TEIL       ------->TEIL------   catcttgtttcccttggttttatttttaaaaaaatattagtttctccataaatacatttttcaaaatgcatccaaatttgacatgaatttatgtatcagg  17798400  Previous    Next  AGI:  At4g37850.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G22750.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO49798.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75020.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 17796087    to: 17797894    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version