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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
HSFB2a(2)
--------->
HSFB2a(2)
<<<<<<<<<
WRKY18
<-----------
GT1
<-----------
HVH21
--------->
TOE2(3)
---------->
DOF2
<---------
At4g35610
<---------
TOE2(3)
---------
AHL20(2)
--------->
At4g35610
<---------
YAB1
--------
YAB1
--------->
TOE2(3)
<-----------
GT1
--------->
AHL20(2)
------
ICU4
<-----------
GT1
---------->
DOF2
<---------
YAB1
<---------
AHL20(2)
<--
atttattgtattaaagagaatttacattagctgtcaaaaaaaaaaaaaaaagagaattaacattattttacagaacataaaattttgaaaatagatagcg
17658200
<---------
AHL20(2)
---
--------->
GLK1(2)
------
<---------
ARR11(3)
<---------
ZAT14
<---------
AtLEC2
--------->
ARR11(3)
<----------
DOF2
--------->
ZAT14
-------
ALFIN1
<----------
DOF2
--------->
AHL20(2)
<---------
ANAC46
-------
ccactgcatgtaagaacatacaaatttctttttttcaacaaaatctatttatatttcttctttttttgaacattatgtgtagtttgtagtaaactaaaaa
17658300
--------->
ATHB12
--------->
AHL20(2)
------>
MYB46(1)
<--------
P
------>
MYB83
<---------
ATHB12
<---------
YAB1
----------->
RAV1(1)
<---------
ARR14(2)
--------->
AtMYB61
--------->
ICU4
<---------
AHL20(2)
--------->
MYB46(3)
--------->
ANAC58
<------
ZmHOX2a(1)
-
------>
ALFIN1
<---------
AHL20(2)
--------->
ANAC58
<------
MYB83
<-
--->
DAG2
--------->
AHL20(2)
--------->
ANAC46
<------
MYB46(1)
<---------
--->
DOF2
--------->
AHL20(2)
---------->
ID1
--------->
ARR14(2)
<----------
DOF2
gtgtgaccaacacaatttaaatcattcgattttgtagcaaaaacatttttgttccaatttccaagcagcaaatatggtaggaatataaattctttactat
17658400
<---------
ARR14(2)
--------->
GLK1(2)
--------->
ARR11(3)
--------->
TOE2(3)
<----
------>
ZmHOX2a(1)
--------->
YAB1
--------->
TOE1(3)
<---------
AHL20(2)
--------->
ID1
---------->
DOF2
----------->
GT1
<-----------
GT1
<---------
STY1(2)
----------
GT1
----------->
GT1
--------->
ICU4
<--------
P
<---------
DAG2
--------->
STY1(2)
--
GT1
---------->
DOF2
<---------
ATHB12
----------->
GT1
<---------
YAB1
--------->
AHL20(2)
ttttcctcttaacacataaaagtaaaaaaagcattcaatgatcagttaaaatctggttagaattctaccttatcatttagaactagctaatatttaaatt
17658500
--------->
YAB1
<----------
DOF2
<---------
ICU4
<---------
ZAT14
--------->
ARR11(3)
--------->
ICU4
--------->
ZAT14
<---------
ARR11(3)
<---------
ATHB12
--------->
AHL20(1)
<------------
CBF
--------->
WOX13(1)
<---------
AHL20(2)
<------
ZmHOX2a(1)
---------->
DOF2
---
TEIL
--------->
AHL20(2)
----------->
TBP
>>>>>>>>>
TBF1
------------>
CBF
-----
catatatacaaaaaataaaatgggaactgtagagactagagactataaatagaggattgagaagaagaacttttaaagctctatcaatcatgaactactc
17658600
--------->
AHL20(2)
<---------
AHL20(2)
<------
NtERF2
----------->
GT1
--------->
LBD16
--------->
YAB1
--------->
DAG2
--------->
AHL20(2)
<----------
DOF2
<---------
YAB1
<---------
LBD16
<----------
DOF2
*
TSS
<---------
YAB1
---------->
DOF2
--------->
AHL20(1)
<----------
DOF2
<---------
ARR14(2)
--------->
HSFB2a(2)
--------------->
AGL15
----------->
GT1
---------->
DOF2
--------->
TOE2(3)
------>
ZmHOX2a(1)
---->
ANAC46
----------------->
AGL3
--------->
RAP2.6(2)
<-----------
GT1
--------->
ARR14(2)
gcctt
ctccaacttttaaaactcatcataaatagtaaaaaagtagccggaaaaataaaataaaaagtctatttctctttcctttaaaatccaaatcctat
17658700
<-----
--------->
HSFB2a(1)
<-----------
ARR10
--------->
ARR14(2)
<---------
ANAC55(2)
--------->
HSFB2a(2)
--------->
ANAC58
<---------
ANAC58
<---------
ARR14(2)
--------->
ANAC55(2)
<---------
HSFB2a(2)
<---------
HSFB2a(2)
--
<----------
DOF2
--------->
ANAC46
--------->
HSFB2a(2)
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
<----------
DOF2
--------->
ANAC58
--------->
GLK1(2)
<----------
DOF2
--------->
ARR11(3)
<---------
CCA1(2)
--------->
ANAC46
--------->
AHL20(2)
<---------
ANAC58
<---------
ARR11(3)
aaactcatagctttctctgttctttacttatacctcacgttatacatatatatagagtttctataaatgcttctctttcctctcgaacaaatcttcctca
17658800
------>
ZmHOX2a(1)
<---------
ARR14(2)
------>
MYB83
--------->
ARR14(2)
------>
MYB46(1)
<-----------
GT1
--------->
ANAC58
<---------
ARR11(3)
--------->
ANAC58
--------->
AHL20(2)
--------->
ZAT6
----
ALFIN1
<---------
ALFIN1
--------->
AHL20(1)
<-----------
GT1
<---------
At4g35610
------->
ZAT14
--------->
ANAC46
<---------
AHL20(1)
<---------
MYB59
--------->
ZAT6
<-----------
GT1
cttctctcatttccacactcaccttcctctctatatattaaaccctatctacttaactcttcttctaactctaatctctctctctatttactctgcttct
17658900
--------->
ALFIN1
<-------
PIF5
------->
PIF5
<---------
ANAC58
<---------
bZIP60(2)
<---------------
AtSPL3
<---------
ANAC58
<-------
GAMYB
<---------
ANAC46
<---------
MYB46(3)
<------
ZmHOX2a(1)
--------->
MYB55(2)
--------->
ALFIN1
--------->
ALFIN1
--------->
LBD16
<------
NtERF2
<---------
DREB2C(2)
<---------
ETT(1)
<---------
ANAC46
<---------
ZAT14
<---------
DEAR3(1)
----------->
HVH21
<---------
ANAC58
--------->
ZAT14
----------->
TGA1
--------->
DEAR3(2)
<---------
ANAC58
--------->
ALFIN1
----------->
HVH21
--------->
SPL7
<---------
RAP2.3(3)
<---------
ANAC46
<---------
ICU4
<---------------
AtSPL8
<---------
DEAR3(1)
<---------
DEAR3(1)
---------->
DOF2
--------->
MYB52(1)
--------->
MYB46(3)
<------
NtERF2
----------->
HVH21
gttctcactctgaaagaaccaaaac
atgacggtggttagagagtacgacccgacccgagacttagtcggcgtggaggacgtggaacgacggtgtgaagtc
17659000
<---------
ANAC58
<----------
DOF2
<---------
DAG2
------>
MYB83
--------->
ORA47(1)
--------->
DEAR3(1)
--------->
MYB46(3)
------>
MYB46(1)
<----------
DOF2
------>
MYB46(1)
<---------
ETT(1)
--------->
ANAC58
--------->
DREB2C(2)
<---------
ARR14(2)
--------->
ANAC58
<---------
MYB46(2)
--------->
ARR14(2)
------>
ZmHOX2a(1)
<------
NtERF2
--------->
DEAR4(1)
--------->
ARR14(2)
------>
MYB83
--------->
MYB52(1)
--------->
DEAR3(2)
<---------
ARR14(2)
<-----------
GT1
------>
MYB46(1)
<-----------
GT1
----------->
HVH21
--------->
ANAC46
----------->
GT1
<--
------>
MYB83
<----------
DOF2
<---------
ANAC58
--------->
GLK1(2)
<---------
CCA1(2)
<-----------
GT1
ggaccaagcggcaagctttctcttttcaccgaccttttgggtgacccgatttgtagaatccgacattcaccttcctatctcatgctg
gtaataacatgtt
17659100
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AGI:
At4g37580.1
Description:
HLS1 (HOOKLESS 1); N-acetyltransferase. similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT2G23060.1); similar to putative N-acetyltransferase hookless1 [Brassica napus] (GB:CAC80824.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182)
Range:
from: 17658606
to: 17660872
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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