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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
--------->
YAB1
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
DAG2
--------->
AHL20(2)
<---------
AtLEC2
<----------
DOF2
--------->
YAB1
------>
CCA1(2)
--------->
ANAC46
--------->
AHL20(1)
------
ARR11(3)
<-----------
GT1
--------->
AHL20(2)
----->
ARR11(3)
--------->
AHL20(2)
<---------
AHL20(2)
----->
ARR14(2)
--------->
MYB52(1)
<---------
AHL20(2)
<---------
ATHB12
------
ARR14(2)
<---------
MYB52(2)
--------->
AHL20(2)
--------->
AHL20(2)
---
----->
ARR11(1)
<----------
ID1
----------->
HVH21
<---------
MYB52(1)
--------->
AHL20(1)
atttgcataaaacttcaaaaaaaacaaaaactaacaatatactgattttgtgacattaatttacaccgctagctttttcaataaatttaataataaaaaa
17459400
-----
------
<-----
--------->
LBD16
------>
NtERF2
-----
<---------
ANAC46
--------->
ANAC58
>>>>>>>>>
ARR1
--------->
HSFB2a(1)
--------->
ANAC46
>>>>>>>>>
ARR2
--------->
KAN4(1)
--------->
CCA1(2)
<---------
TOE2(3)
------>
ZmHOX2a(2)
<---------
ARR11(3)
--------->
At4g35610
<---------
KAN4(1)
--------->
ARR14(2)
<---------
At4g35610
<---------
HSFB2a(1)
<---------
ARR14(2)
----------->
RAV1(2)
--------->
ANAC58
--------->
ICU4
--------->
ARR11(3)
<---------
ANAC55(2)
--------->
ANAC58
<------
NtERF2
--
<---------
GLK1(2)
<-------
TEIL
<---------
TOE2(3)
<---------
LBD16
<-
--------->
CCA1(2)
--------->
YAB1
----------->
GT1
<---------
TOE1(3)
<---------
LBD16
-----
-------->
GT1
--------->
ANAC58
--------->
GLK1(2)
<---------
YAB1
<---------
YAB1
<---------
KAN4(2)
tggatataagatttgcacacaatcttcaatttagaatcagttacatatac
ctgaagttgtgattcaaggtaagctaagattgtgccgggaatgatcccac
17459500
--------->
AtMYB61
--------->
MYB46(3)
<----------
ID1
<---------
ALFIN1
<------
ZmHOX2a(1)
--------->
AtMYB61
--------->
SPL7
--------->
MYB46(3)
--------->
SPL1(1)
---->
ANAC58
<---------
SPL1(1)
<------
--->
LBD16
<---------
SPL1(2)
<-------
----
LBD16
<---------
ANAC58
--------->
ANAC58
<---------
HSFB2a(2)
---->
ANAC46
------------------>
SPL14
--------->
HSFB2a(2)
------->
ARR14(2)
<-----------
HVH21
<------
ZmHOX2a(1)
<---------
LBD16
--------
ARR14(2)
----------->
GT1
<---------
SPL7
--------->
ANAC46
--------->
ARR14(2)
---->
ANAC58
<---------
TOE2(3)
<---------
ANAC58
--------->
ANAC58
<---------
ARR14(2)
ggattccaccaccatcgatgctaagaatggtcacaagttgtccgtacgaaggaggaagacaagcaactgttctatcttgtagatgagcagttctggatat
17459600
--------->
YAB1
------->
TEIL
------->
TEIL
<-----------
GT1
<---------
ATHB12
--------->
At4g35610
--------->
ARR14(2)
--------->
WOX13(1)
<-------
<---------
At4g35610
<---------
CCA1(2)
--------->
YAB1
<------
ZmHOX2a(2)
---
CCA1(1)
------>
ZmHOX2a(1)
<-----------
GT1
--------->
TOE2(3)
<-----------
GT1
--
ARR11(3)
------>
ZmHOX2a(2)
<----------
DOF2
<----------
DOF2
<---------
TOE2(3)
<----------
DOF2
<-
ttctgatgaacttattgatcctctctctgtatccat
gcttttaaactcttctcctttacaatctcaatcaaggtttatttgtattactttagatcaaatc
17459700
---------->
ID1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
HSFB2a(2)
<---------
AHL20(2)
--------->
HSFB2a(2)
--------->
ATHB51
<---------
AHL20(2)
<---------
ICU4
<-----------
TBP
--------->
AHL20(2)
--------->
ANAC55(2)
<---------
AHL20(2)
<---------
ANAC55(2)
<---------
AHL20(2)
<---------
YAB1
<---------
MYB52(1)
--------->
AHL20(2)
----------->
GT1
<-------
GAMYB
<---------
WOX13(1)
--------->
CCA1(2)
<---------
MYB52(2)
-
--
CCA1(2)
--------->
ATHB12
<-----------
GT1
<---------
YAB1
*
TSS
--------->
MYB46(3)
<
---------
DOF2
--------->
ICU4
<----------
DOF2
----------->
GT1
------->
TEIL
--------->
MYB52(1)
-------
tctttcgcttagtgattaattatttatttctccttttcaagatagagatggtgataaatgtgat
gaacccattagaactaccgttacatatttatagaaa
17459800
<
<
<---------
ZAT6
<
--------->
ARR14(2)
--
<---------
ANAC58
<-----------
HVH21
<-
<-----------
TBP
<---------
AtLEC2
--------->
ANAC46
<----
--------->
CCA1(2)
<---------
ANAC58
--------->
WOX13(1)
<----
-------->
ARR11(3)
--------->
ZAT6
<---------
ARR14(2)
<----
---------
ARR11(3)
--------->
ANAC46
--------->
GLK1(1)
<-------
--->
DOF2
<-----------
GT1
<---------
YAB1
<---------
CCA1(2)
<-----------
GT1
gagatatatgtagattagggagtctatatacaacactatgttatgcatgcccatacacatatccatcacatagtgtttggatgttttttgaaccagtttc
17459900
<---------
ANAC58
<---------
ANAC46
<------
MYB83
<------
MYB46(1)
<--------
P
---------
ANAC58
---------
ANAC58
-------
GAMYB
<----------
DOF2
------->
ATHB12
<---------
ANAC58
--------
MYB46(3)
<---------
ANAC58
-----
ANAC58
--------->
ANAC46
<--------
P
---
-----
ANAC46
--------->
ANAC46
<-------
GAMYB
-------
-----
ANAC58
--------->
ANAC58
<---------
MYB46(3)
--------->
AHL20(2)
--
GLK1(2)
<---------
ANAC58
--------->
ANAC58
<---------
AtMYB61
<---------
AHL20(2)
ttggttgggatgtcgtgttcatcactctcacgccccattacacttgtggttgctttagagcatgtcatgttacacacatacttctatatttaaaaacaaa
17460000
<---------
ZAT2
---
--------->
At4g35610
<--
----------->
HVH21
----------->
RAV1(2)
<---
--------->
HSFB2a(2)
--------->
AHL20(2)
--------->
ZAT18
<---------
At4g35610
<-------
<---------
HSFB2a(2)
----------------->
AG
---------->
DOF2
--------->
At4g35610
---------
------>
ARR11(3)
<----------
DOF2
--------->
AHL20(2)
<-----------
HVH21
<--------
--->
DOF2
<---------
At4g35610
<---------
AHL20(2)
--------->
At4g35610
<---------
AHL20(2)
ggtctagatgacagctgttctttccaaaataaacaattaatagacataaatgcacaaaatttagtagcagaagtcacctgaacatataagtatatatatt
17460100
------>
AHL20(2)
------>
ZmHOX2a(2)
-------
AHL20(2)
<------
ZmHOX2a(2)
------
AHL20(2)
<---------
ICU4
<----------
DOF2
--------->
ARR11(3)
<--------
--
AHL20(2)
--------->
ICU4
<---------
MYB52(1)
<---------
ARR11(3)
---------
>
AHL20(1)
<---------
AHL20(2)
<---------
At4g35610
--------->
AGP1
<---------
ZAT6
-
AHL20(1)
--------->
YAB1
--------->
CCA1(2)
<---------
YAB1
--------->
YAB1
ttaaatgttcttagtttataaaaattagtagaagataagaccgctacttttgaacattttcatcttctaattgtgagatctatttataactcagtgttca
17460200
<----------
DOF2
<---------------
AGL15
--------------->
AGL15
<---------
DAG2
--------->
ATHB12
<---------
ANAC58
<---------
At4g35610
<---------
ANAC55(2)
<-----------
GT1
<-----------
GT1
------>
ZmHOX2a(1)
--------->
AHL20(2)
<----------
DOF2
------>
MYB83
<-----------------
AGL3
<---------
AHL20(1)
<---------
DAG2
<-----------
GT1
<---------
ANAC46
<---------
AHL20(2)
<---------
ANAC58
<---------
TOE1(3)
--------->
ANAC55(2)
--------->
AHL20(1)
<---------
ANAC58
--------->
MYB59
<---------
ANAC58
-
ZAT14
--------->
ICU4
<---------
YAB1
<---------
TOE2(3)
<-------
TEIL
<-------------
>
ZAT14
----------->
GT1
<----------
DOF2
--------->
LBD16
------>
MYB46(1)
=====================
gaaatttttgaagagtaatattttagctccttttcattgcttttttccgagttttttaggttaccatcctgaagatgcgtaaactttttttggtacaatg
17460300
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AGI:
At4g37050.1
Description:
PLA V/PLP4 (Patatin-like protein 4); nutrient reservoir. similar to PLA IVA/PLP1, nutrient reservoir [Arabidopsis thaliana] (TAIR:AT4G37070.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61299.1); contains InterPro domain Acyl transferase/acyl hydrolase/lysophospholipase; (InterPro:IPR016035); contains InterPro domain Patatin; (InterPro:IPR002641)
Range:
from: 17457129
to: 17459764
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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