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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                          --------->AHL20(2)
                                                                                          --------->YAB1
                                                                                       --------->YAB1
                                                                                   <---------AHL20(2)
                                                                                  <---------AHL20(2)
                                                                                  --------->AHL20(2)
                                                                              <---------AHL20(1)
                                                                     <---------DAG2--------->AHL20(2)
 <---------AtLEC2                                                    <----------DOF2--------->YAB1
------>CCA1(2)                                             --------->ANAC46   --------->AHL20(1)
------ARR11(3)                                           <-----------GT1      --------->AHL20(2)
----->ARR11(3)                                       --------->AHL20(2)       <---------AHL20(2)
----->ARR14(2)              --------->MYB52(1)       <---------AHL20(2)      <---------ATHB12
------ARR14(2)            <---------MYB52(2)        --------->AHL20(2)       --------->AHL20(2)  ---
----->ARR11(1)   <----------ID1               ----------->HVH21 <---------MYB52(1)--------->AHL20(1)
 
atttgcataaaacttcaaaaaaaacaaaaactaacaatatactgattttgtgacattaatttacaccgctagctttttcaataaatttaataataaaaaa  17459400
                                                                                               -----
                                                                                              ------
                                                                                              <-----
                                                                                  --------->LBD16
                                                                                  ------>NtERF2-----
                                                                                 <---------ANAC46
             --------->ANAC58                                             >>>>>>>>>ARR1--------->HSFB2a(1)
             --------->ANAC46                                             >>>>>>>>>ARR2--------->KAN4(1)
       --------->CCA1(2)                                                <---------TOE2(3)  ------>ZmHOX2a(2)
      <---------ARR11(3)                                            --------->At4g35610<---------KAN4(1)
      --------->ARR14(2)                                            <---------At4g35610<---------HSFB2a(1)
      <---------ARR14(2)                     ----------->RAV1(2)   --------->ANAC58    --------->ICU4
      --------->ARR11(3)               <---------ANAC55(2)         --------->ANAC58<------NtERF2  --
      <---------GLK1(2)               <-------TEIL            <---------TOE2(3)  <---------LBD16  <-
--------->CCA1(2)  --------->YAB1 ----------->GT1             <---------TOE1(3) <---------LBD16-----
-------->GT1 --------->ANAC58  --------->GLK1(2)       <---------YAB1   <---------YAB1<---------KAN4(2)
 
tggatataagatttgcacacaatcttcaatttagaatcagttacatatacctgaagttgtgattcaaggtaagctaagattgtgccgggaatgatcccac  17459500
        --------->AtMYB61
       --------->MYB46(3)                           <----------ID1
     <---------ALFIN1                             <------ZmHOX2a(1)
     --------->AtMYB61                   --------->SPL7
    --------->MYB46(3)                  --------->SPL1(1)
---->ANAC58                             <---------SPL1(1)                                    <------
--->LBD16                              <---------SPL1(2)                                    <-------
----LBD16                             <---------ANAC58   --------->ANAC58                <---------HSFB2a(2)
---->ANAC46                        ------------------>SPL14                              --------->HSFB2a(2)
------->ARR14(2)         <-----------HVH21     <------ZmHOX2a(1)                        <---------LBD16
--------ARR14(2)        ----------->GT1<---------SPL7    --------->ANAC46             --------->ARR14(2)
---->ANAC58        <---------TOE2(3)  <---------ANAC58   --------->ANAC58             <---------ARR14(2)
 
ggattccaccaccatcgatgctaagaatggtcacaagttgtccgtacgaaggaggaagacaagcaactgttctatcttgtagatgagcagttctggatat  17459600
                                                                --------->YAB1
     ------->TEIL         ------->TEIL <-----------GT1         <---------ATHB12
--------->At4g35610       --------->ARR14(2)                 --------->WOX13(1)             <-------
<---------At4g35610      <---------CCA1(2)                --------->YAB1                 <------ZmHOX2a(2)
---CCA1(1)       ------>ZmHOX2a(1)    <-----------GT1     --------->TOE2(3)     <-----------GT1
--ARR11(3)     ------>ZmHOX2a(2)  <----------DOF2 <----------DOF2 <---------TOE2(3)<----------DOF2<-
 
ttctgatgaacttattgatcctctctctgtatccatgcttttaaactcttctcctttacaatctcaatcaaggtttatttgtattactttagatcaaatc  17459700
                          ---------->ID1
                    --------->AHL20(2)
                    <---------AHL20(2)                                                    <---------HSFB2a(2)
                   <---------AHL20(2)                                                     --------->HSFB2a(2)
                --------->ATHB51                                                        <---------AHL20(2)
                <---------ICU4                                                        <-----------TBP
                --------->AHL20(2)                                                --------->ANAC55(2)
                <---------AHL20(2)                                                <---------ANAC55(2)
            <---------AHL20(2)                    <---------YAB1               <---------MYB52(1)
            --------->AHL20(2)                 ----------->GT1                <-------GAMYB
           <---------WOX13(1)         --------->CCA1(2)                  <---------MYB52(2)        -
--CCA1(2)--------->ATHB12<-----------GT1       <---------YAB1  *TSS      --------->MYB46(3)        <
---------DOF2  --------->ICU4<----------DOF2 ----------->GT1  ------->TEIL --------->MYB52(1)-------
 
tctttcgcttagtgattaattatttatttctccttttcaagatagagatggtgataaatgtgatgaacccattagaactaccgttacatatttatagaaa  17459800
                                                                                                   <
                                                                                                   <
                                                                     <---------ZAT6                <
                                                        --------->ARR14(2)                        --
                                         <---------ANAC58   <-----------HVH21                     <-
  <-----------TBP                        <---------AtLEC2  --------->ANAC46                    <----
--------->CCA1(2)                        <---------ANAC58  --------->WOX13(1)                  <----
-------->ARR11(3)            --------->ZAT6             <---------ARR14(2)                     <----
---------ARR11(3)         --------->ANAC46             --------->GLK1(1)                    <-------
--->DOF2                <-----------GT1<---------YAB1  <---------CCA1(2)              <-----------GT1
 
gagatatatgtagattagggagtctatatacaacactatgttatgcatgcccatacacatatccatcacatagtgtttggatgttttttgaaccagtttc  17459900
         <---------ANAC58
         <---------ANAC46
  <------MYB83
  <------MYB46(1)
<--------P
---------ANAC58
---------ANAC58
-------GAMYB                                     <----------DOF2
------->ATHB12                                  <---------ANAC58
--------MYB46(3)                                <---------ANAC58
-----ANAC58                 --------->ANAC46 <--------P                                          ---
-----ANAC46               --------->ANAC46  <-------GAMYB                                    -------
-----ANAC58               --------->ANAC58 <---------MYB46(3)                         --------->AHL20(2)
--GLK1(2)<---------ANAC58 --------->ANAC58<---------AtMYB61                           <---------AHL20(2)
 
ttggttgggatgtcgtgttcatcactctcacgccccattacacttgtggttgctttagagcatgtcatgttacacacatacttctatatttaaaaacaaa  17460000
         <---------ZAT2                                                                          ---
         --------->At4g35610                                                                     <--
    ----------->HVH21                                                   ----------->RAV1(2)     <---
--------->HSFB2a(2)      --------->AHL20(2)    --------->ZAT18          <---------At4g35610 <-------
<---------HSFB2a(2)----------------->AG     ---------->DOF2             --------->At4g35610---------
------>ARR11(3) <----------DOF2  --------->AHL20(2)                 <-----------HVH21      <--------
--->DOF2 <---------At4g35610     <---------AHL20(2)           --------->At4g35610         <---------AHL20(2)
 
ggtctagatgacagctgttctttccaaaataaacaattaatagacataaatgcacaaaatttagtagcagaagtcacctgaacatataagtatatatatt  17460100
------>AHL20(2)                                                            ------>ZmHOX2a(2)
-------AHL20(2)                                                           <------ZmHOX2a(2)
------AHL20(2)    <---------ICU4           <----------DOF2               --------->ARR11(3)<--------
--AHL20(2)       --------->ICU4        <---------MYB52(1)                <---------ARR11(3)---------
>AHL20(1)       <---------AHL20(2)    <---------At4g35610                --------->AGP1   <---------ZAT6
-AHL20(1)      --------->YAB1  --------->CCA1(2)               <---------YAB1   --------->YAB1
 
ttaaatgttcttagtttataaaaattagtagaagataagaccgctacttttgaacattttcatcttctaattgtgagatctatttataactcagtgttca  17460200
                                                                                <----------DOF2
                                                                                <---------------AGL15
                                                                                --------------->AGL15
                                                                                <---------DAG2
                              --------->ATHB12                           <---------ANAC58
                     <---------At4g35610                                 <---------ANAC55(2)
                   <-----------GT1      <-----------GT1          ------>ZmHOX2a(1)
               --------->AHL20(2)   <----------DOF2           ------>MYB83     <-----------------AGL3
               <---------AHL20(1)   <---------DAG2       <-----------GT1 <---------ANAC46
               <---------AHL20(2)  <---------ANAC58  <---------TOE1(3)   --------->ANAC55(2)
               --------->AHL20(1)  <---------ANAC58  --------->MYB59     <---------ANAC58
-ZAT14        --------->ICU4 <---------YAB1          <---------TOE2(3)  <-------TEIL  <-------------
>ZAT14   ----------->GT1  <----------DOF2   --------->LBD16   ------>MYB46(1)  =====================
 
gaaatttttgaagagtaatattttagctccttttcattgcttttttccgagttttttaggttaccatcctgaagatgcgtaaactttttttggtacaatg  17460300
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AGI:  At4g37050.1   
Description:  PLA V/PLP4 (Patatin-like protein 4); nutrient reservoir. similar to PLA IVA/PLP1, nutrient reservoir [Arabidopsis thaliana] (TAIR:AT4G37070.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61299.1); contains InterPro domain Acyl transferase/acyl hydrolase/lysophospholipase; (InterPro:IPR016035); contains InterPro domain Patatin; (InterPro:IPR002641)
Range:  from: 17457129    to: 17459764    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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