Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ----------->GT1              <----------ID1                                 <---------YAB1             ----------->GT1      <----------DOF2          --------->YAB1      <---------ANAC46 -----DOF2  --------->DAG2    --------->DAG2              <-----------------AGL1 ---DAG2    ------------------------>ANAC81        <---------TOE2(3)        <---------ANAC46 --GT1     ---------->DOF2   ---------->DOF2      ---------->DOF2 ----------->GT1                   <   ttattcatatagaaaaaggaaaaaacaaacaaaaagctttgttccaagagtttaaagtatatcaaaattggcaaaattgtggggttttgaagtaatctac  17400400                                                           --------->WRKY12                                                           <---------ZAT18                                                        <---------ANAC58                                                        <---------ANAC58                                                        <---------ANAC46                                                     ------>MYB83                                                     --------->ANAC46                                                     ------>MYB46(1)                                                     --------->ANAC58                                                     --------->ANAC58                               -                                                  --------->MYB46(3)                               <-                           <---------------AGL15------>MYB83                                  -------                           ==========================================================================                           <----------DOF2    <---------MYB59                            ------------              --------->AtLEC2                <---------MYB46(2)       --------->TOE2(3) <-----------            <---------ANAC58             <---------ANAC58  --------->WRKY38(1)          <---------ANAC55(2)            <---------ANAC58  <---------YAB1 --------->HSFB2a(2)    <----------DOF2     --------->ANAC55(2)  --------->KAN4(1)        --------------->AGL15------>MYB46(1) <---------ZAT14       --------->AHL20(2) ---------GLK1(2)         <---------DAG2 <---------ANAC58--------->LBD16              <-----------GT1   tagattattcattttcttgcaaaaaacacctttttatagaattgcttaccgaaccaagccgtggacttcactttcttaaaacatgaaattacatattaaa  17400500                                                                           --------->YAB1                                                                         --------->AHL20(2)                                                                        --------->YAB1                                                           --------->AHL20(1)      <---------YAB1                                       <---------ARR11(3) -------->GLK1(2)                                          <---------AHL20(1) --------->AHL20(2) --------GLK1(2)      <---------ARR11(3)             ----------->GT1   --------->AHL20(2) --->DOF2<---------WOX13(1)                     ---------->DOF2    --------->AHL20(2)      <---------GLK1(2) ====MADS_MADS        --------->ARR11(3)   <---------AHL20(2) --------->AHL20(2)       ---------->DOF2 --->AGL15     ---------->DOF2             --------->AHL20(2) <---------AHL20(2)  --------->AHL20(2) ----AGL15 --------->WOX13(1)             <---------YAB1   --------->ARR11(3)--------->AHL20(2)   ggaatcttttgattaatcaaagaagatgtttgtatacatagataataaatgaaagtggaaatatttttttaaaataaaaataaaaaaaataaagaaactc  17400600                                                                            --------->AHL20(2)                                                                            <---------AHL20(1)                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                                       <---------AHL20(2)                                                                       --------->AHL20(1)                                  ---------->DOF2                      <---------AHL20(1)                                 <---------------AGL15                 --------->AHL20(2)                                 --------------->AGL15              <---------AHL20(2)                                ----------------->AG              <---------AHL20(2)                     <---------AHL20(2)                           <---------YAB1                    --------->AHL20(2)  --------->ANAC58       --------->AHL20(1)      <------ZmHOX2a(1)       <-----------GT1  <---------MYB46(3)<---------AHL20(1)<-----------GT1  <---------TOE2(1) --------->AHL20(1)  --------->ANAC58      --------->YAB1<---------AHL20(2)   ----  <---------TOE1(1) <---------AHL20(1)---------->DOF2         --------->AHL20(2)<---------ICU4 ------   caatacgaggaattgtttcgaatataatcttttttccaaagaaagcaagtggttagagagagaataatattattttattaaatttttacaaaaaaaacag  17400700                                                                             --------->WOX13(1)                                                                          --------->ANAC58                                                                          --------->ANAC46      -----                                                  <------ZmHOX2a(1)       --------->ANAC58      <----                                           <---------TOE2(3)            ---------->DOF2         <----                                ----------->GT1   ----------->GT1   <---------ANAC58        <--------                            --------->ALFIN1     ----------->GT1    <---------ANAC46        <--------                           --------->At4g35610---------->DOF2       <---------ANAC58--------->YAB1 ------->HVH21          --------->ZAT18  ---------->DOF2         <----------DOF2 --------->WOX13(1) ----->GT1         ---------->DOF2--------->AHL20(2)        ---------->DOF2------------>CBF<---------YAB1   tgacaagagaagagagagagagaaagggcagtggaagtaaatataaaggaaaggataaaaatgaaagctttcgtagaagcaatctatcaaatttttattt  17400800                                                                         ---------->DOF2                                                                       ------->GAMYB                                                                       --------->AtMYB61                                                                     ------>MYB83                                                                     -------->P                                                                     ------>MYB46(1)                                                                    --------->MYB55(1)                                                                   <---------MYB111(1)                                                                   <---------MYB46(2)                                                                   <---------MYB111(2)                                                                   --------->MYB46(3)                                                                   --------->AtMYB61                                                        <---------AHL20(2) <-----------GT1                                        --------->AHL20(2) ---->AHL20(2)                               <---------TOE2(3)     <---------MYB55(2) -----AHL20(2)                              ---------->DOF2       --------->MYB46(3) -----AHL20(1)       <---------At4g35610    *TSS    <---------AHL20(2)--------->MYB46(3) -AHL20(2)       <----------DOF2       <---------YAB1   <---------AHL20(1)    <----------DOF2 ----------------ANAC81  <----------DOF2 --------->TOE2(3)      <-----------GT1      <----------DOF2   tattttcttctctctctctctttagctcttttttttttgttttcattaaagtttttattttattttctaccaaccaaaagcttttctctttggtttctct  17400900                                                          <------ZmHOX2a(2)                                                         <---------ARR11(3)                        --------->YAB1                   --------->ARR11(3)                      <-----------ARR10          --------->TOE1(3) --------->ANAC58                 -            --------->TOE1(3)     <------ZmHOX2a(1)  ---------->DOF2                               <-            --------->TOE2(3)     ===============================HOX2a_HOX2a    <----------ID1    ---   <---------At4g35610--------->GLK1(2)          --------->TOE2(3) --------->ANAC58     --------->AHL20(2) <-----------GT1  <------ZmHOX2a(1)            ------->TEIL    ------------------------>ANAC81    <--   tatttagcttctaaccttgaggagaatcataccagaggattgaagtttgaaccttcaaagatcaaaatcaagaaaccaaaaaaaaacaaaaaaaatgtgg  17401000                    ------>MYB46(1)                    ------>MYB83                  <---------MYB46(2)                  --------->AtMYB61                  <---------MYB111(1)               --------->ANAC46             --------->AtMYB61             <---------ALFIN1            --------->ANAC58            --------->ANAC46                                                    <---------ARR11(3)            --------->ANAC58                                                    --------->ARR11(3)           ------->TEIL                                                         --------->ARR14(2)          --------->ANAC46                                                      <---------AGP1        --------->ANAC58                                                        <---------ARR14(2)        --------->ANAC46                                                       <---------CCA1(2)        --------->ANAC58              <---------ARR14(2)                      <------MYB46(1)     --------->ANAC46    ---------->DOF2                                      <------MYB83 ----->ZmHOX2a(2) --------->MYB46(3)  --------->ARR14(2)                    <--------P -----ZmHOX2a(2) --------->ANAC58     --------->GLK1(2)           --------->ANAC58 <----------DOF2<-- ------>ARR11(3) --------->ANAC58    <---------GLK1(2)            --------->ANAC58------>ZmHOX2a(2) -------ARR11(3) --------->ANAC46 >>>>>>>>>TBF1         <---------YAB1--------->MYB52(1)          ---   gatctaaacgacgcaccacaccaaacacaaagagaagaagaatctgaagagttttgttattcttcaccaagtaaacgggttggatctttctctaattcaa  17401100                                                                            --------->MYB46(3)                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                       <-----------HVH21                                                                    --------->TGA1a                                                                    --------->O2                                                                    <---------O2                                                                    <---------TGA1a                               ----------->TGA1                     =================================                               ----------->HVH21                   ------>MYB83               <---------HSFB2a(2)                                <---------ALFIN1       <---------MYB46(3)    --------->At4g35610        --------->ANAC58 <-----------GT1     <---------At4g35610   ------>ZmHOX2a(2)      <-----------HVH21------>MYB46(1) <-----------ARR10     --------->At4g35610  <------ZmHOX2a(2)     --------->LBD16  =============MYC_MYB      --------->LBD16     <---------ZAT2      ------->TEIL   ------->TEIL    --------->ANAC58---------->ARF1  ----------->RAV1(2) -------ARR11(3)         <---------ARR14(2)   <---------LBD16<---------ATHB12      --------->ARR14(2) ------>ARR11(3)         --------->ARR14(2) --------->MYB52(1)   ------->GAMYB<-----------HVH21    <-   gctcttcagctgttgttatcgaagatggatccgatgacgatgaacttaaccgggtcagacccaataacccacttgtcacccatcagttcttccctgagat  17401200                    <---------ANAC58                                                <-----------ARR10               <---------REM1(1)                                                    <---------ARR14(2)               <-----------RAV1(1)                                                  --------->ARR14(2)               --------->ALFIN1                                                   --------->LBD16            --------->ALFIN1                                                    <------NtERF2--------            <---------AtMYB61                                                   <---------LBD16            <---------DEAR3(1)                                                 ------>NtERF2<--------           <------NtERF2                                                     --------->MYB46(3)           <-------GAMYB                         <------MYB83 <-----------HVH21--------->MYB52(1) ---           <---------ABI4(1)                     <------MYB46(1)             <---------MYB55(2)  ----          <---------MYB46(3)                     <---------ANAC46       <------ZmHOX2a(2)  --------->LBD16         <---------DEAR3(1)      <---------LBD16 <---------ANAC58      <-----------ARR10   <------NtERF2         <---------DREB2C(2)     ------>ZmHOX2a(1) <---------ZAT6      --------->ARR11(3)  <---------LBD16         --------->ALFIN1   <----------DOF2      <---------ANAC58      --------->AGP1 ------>ZmHOX2a(2)        <---------ABI4(1)   <---------GLK1(1)   --------->MYB46(2)     <---------ARR14(2)<---------DEAR3(1)       ------->GAMYB<---------ANAC46            <---------AtMYB61      --------->ARR14(2)--------->SPL7    --------->MYB52(1)     <---------ANAC58     <---------MYB46(3)     <---------AGP1<------ZmHOX2a(2) ==============MYC_MYB     <---------ANAC58     --------->MYB111(1)   <---------CCA1(2)<---------SPL7 --------GLK1(2)    <---------ANAC58   --------->ZAT18  <---------TOE2(3)------>ZmHOX2a(2) <---------At4g35610   ggattctaacggcggtggtgttgcttctggctttcctcgggctcactggtttggtgttaagttttgtcagtcggatctagccaccggatcgtccgcgggt  17401300  Previous    Next  AGI:  At4g36920.1    Description:  AP2 (APETALA 2); transcription factor. Identical to Floral homeotic protein APETALA 2 (AP2) [Arabidopsis Thaliana] (GB:P47927;GB:Q8L7P9); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G67180.1); similar to AP2-like transcriptional factor [Brassica rapa] (GB:AAX47049.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 17400844    to: 17403329    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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