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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                             --------->CCA1(2)
                            <---------AHL20(1)
                            --------->AHL20(1)
                           --------->AHL20(2)
                       <------NtERF2
     ------->TEIL     --------->LBD16
------->DOF2         <---------ANAC46                                   <---------AHL20(2)
-----AHL20(2)       <---------LBD16                                    --------->ICU4              <
--->AHL20(2)  --------->AHL20(2)       <---------YAB1      ----------->GT1                         <
---YAB1       <---------AHL20(2)    --------->GLK1(2)<----------DOF2<------ZmHOX2a(1)           <---
 
aaaagatggacttcgaataaaatggcggaaatatataagaatttgatagaaaatgacttttctagttaataggaattaatagaaaatgacttacaaagac  17191900
                                                                                  --------->HSFC1(2)
                                                                                  <---------At4g35610
                                        --------->ANAC58              --------->MYB46(3)         <--
                                        --------->ANAC46              --------->DEAR3(1)        <---
                                    ------->GAMYB                    --------->At4g35610        ----
                                 <-----------GT1                    --------->MYB52(1) <---------ANAC58
            <---------TOE1(3)  <---------KAN4(2)                  <------ZmHOX2a(2)    <---------ANAC58
 <---------MYB52(1)     <---------HSFB2a(2)                      <-----------HVH21<---------HSFC1(2)
---------ANAC58         <------NtERF2   --------->ANAC58 <---------GLK1(1)        --------->At4g35610
---------ANAC58 --------->MYB52(1) --------->MYB46(3) <---------TOE1(3)--------->ORA47(1)<---------MYB52(1)
-------DOF2 <---------TOE2(3) --------->YAB1          <---------TOE2(3)--------->ANAC46<---------ANAC46
 
tttcgtttgtccatgaaggtaacaggccgagaagaataaccacaagcgatgaagtttagggtttctccgatcaccggccagcctaagcttccgtttggaa  17192000
                                                                --------->ANAC46
                                                                --------->ANAC58                   -
                                                                --------->ANAC55(2)                -
                                                                --------->ANAC58                  --
                            <<<<<<<<<TBF1    <---------ANAC58   <---------ANAC55(2)              ---
        <<<<<<<<<TBF1--------->ARR11(3)      <---------ANAC58   --------->ANAC55(1)             ----
-------ICU4          <---------ARR11(3)   <----------DOF2 <---------ANAC58                      ----
------ATHB12     <---------ICU4   --------->At4g35610     <---------ANAC46                     <----
----->ICU4      ------>ZmHOX2a(1) <---------At4g35610     <---------ANAC58                    <-----
 
tcattcccttcttcttctcctcattatcttcttcttcatctccatctttcgttttcgagtttcgtagacgtaaccagagccatggacggagaagtattcc  17192100
                                                                      --------->LBD16
                                                                  <---------SPL7
                                                                  ------>NtERF2
                                                                 --------->ETT(2)
                                                                 <---------ETT(2)
                                                                 --------->DEAR3(1)
                                                                 ----------->HVH21
                                                                --------->ATERF1(1)
 <------NtERF2           ------>MYB46(1)                       ------>NtERF2
<-----------HVH21        ------>MYB83                          --------->LBD16
<---------RAP2.6(3)    <---------MYB59                        <---------LBD16                     <-
-------->RAP2.6(2) --------->MYB46(3)                   <---------ARR14(2)                    <-----
-------->ATERF1(2) --------->DEAR3(1)                   --------->ARR11(3)                   <------
------->SPL7    --------->TOE1(2)                --------->MYB52(1)--------->MYB52(1)       <-------
--->NtERF2--------->ANAC58                   <----------ID1  <---------LBD16               <------NtERF2
-->NtERF2 --------->ANAC58              --------->YAB1  <---------ARR11(3)           <----------DOF2
----->LBD16     --------->TOE2(2)      --------->ICU4   <---------GLK1(2)       ------>ZmHOX2a(1) <-
-----RAP2.6(2) --------->MYB46(3)      <---------YAB1   --------->ARR14(2)--------->DAG2  --------->LBD16
----LBD16 --------->ANAC46          --------->AHL20(2)----------->ARR10  ---------->DOF2<---------LBD16
 
ggccgtcaaaaccaagaaaccagcgaccaaataatccatgtaattataaggccaagggagattttccggcgaccggaaaagtcctgcgcttgccggaggt  17192200
   --------->TOE2(3)
  --------->ANAC58
  --------->ANAC55(1)
  --------->ANAC46
  --------->ANAC58
  <---------ANAC55(2)
  --------->ANAC55(2)  <---------ANAC46
--------ANAC58         <---------ANAC58                      <---------ARR14(2)
--GAMYB                <---------ANAC58                      --------->ARR14(2)
---MYB46(3)        <---------MYB52(1)                     <---------ANAC46
--AtMYB61----------->GT1                          <-------MYC3   ----------->GT1
--------ANAC58<-----------GT1   <-----------GT1   ------->MYC3--------->CCA1(2)     <------ZmHOX2a(2)
 
tgcatacgtaaacagttaaaccggtttcttgggaataactatatgcctaagcacatgaattgtggatatagcaaaatttgtgatgagatcgatagagaat  17192300
                                                                                                <---
                                                                                        --------->TGA2(1)
                                        --------->DAG2                                  <---------bZIP60(1)
                                       ---------->DOF2         <-----------TBP          --------->bZIP60(1)
          <-----------GT1           <------NtERF2      <---------AHL20(2)               <---------TGA2(1)
---------->DOF2    *TSS     --------->AtLEC2       --------->AHL20(2)      ---------->DOF2      ----
 
tttaaaagggttttctcaattctcaaaaaccatgcaggcagagaaagtgagagaataaatatttgtatttgtagagcttaaagccatggtgatgtcattt  17192400
                                                ------->TEIL
                                                <---------ARR11(1)
                                                <-----------ARR10
                                                --------->ARR14(2)
                                                <---------ARR14(2)
                                               <---------CCA1(2)
                                              --------->LBD16
                             --------->AHL20(2)<---------ARR14(1)
                        --------->YAB1       --------->ANAC55(2)                  <---------ARR14(2)
                      <---------TOE2(3)      --------->ANAC46           <---------ANAC55(2)
   <---------ANAC46 --------->AHL20(2)    <-----------GT1               --------->ANAC55(2)
------YAB1          <---------AHL20(2)<---------DAG2                 --------->ARR14(2)      -------
-------->CBF    <------ZmHOX2a(1)     <----------DOF2      <-----------GT1        --------->ARR14(2)
 
tcaatgggggagaaacagaggaattaatgatataaaatccacttttacccgtatctcactatatacaatccaaatatgtattgcatatatacttaaactt  17192500
                                   --------->GLK1(2)
                                   --------->ARR11(3)
                                  --------->RVE1(1)
                          --------->ANAC58
                          ------>MYB46(1)
                          ------>MYB83                         <-------TEIL            --------->YAB1
    ------>MYB83          --------->ANAC58              --------->TOE2(3)    <---------AHL20(2)
    ------>MYB46(1)  <-----------GT1                    --------->TOE1(3)    --------->AHL20(2)
-->TOE2(3)       --------->AHL20(2)<---------ARR11(3)  ----------->GT1    ----------->GT1  ---------
 
aaaaacccactaaaaacaacttaattaccaagctaaaaaatctaaaatagttttattttcgttaaattcatcttaagtagttaattactagtataatctt  17192600
                                                      <---------ICU4
                                                     --------->ICU4
                                                 ------->GAMYB
                                               --------->At4g35610
                             <---------ICU4  <---------WRKY12
                            --------->ICU4   <---------WRKY38(1)
                          --------->YAB1     <---------WRKY45
                       --------->YAB1        --------->ETT(2)                               <-------
>ARR11(3)     --------->MYB46(3)            --------->WRKY18(1)   ------->TEIL         <---------YAB1
 
gaatttttagtatgtcaacaacttaataagcataatgacattttttggtcaacagcataatgacatatgtatcaatgtattgatatttttctgattaccc  17192700
                                                      --------->ARR11(3)
                                                     --------->CCA1(1)    <---------------AGL15
                                                     --------->RVE1(1)    --------------->AGL15
                                                  <---------AHL20(2)   --------->ANAC58
                                                 --------->AHL20(2)    --------->ANAC58       ------
                                                 <---------AHL20(2)--------->YAB1             <-----
    <----------DOF2                     <---------YAB1<---------ARR11(3)  ==========================
----GT1                  <----------ID1<---------AHL20(2)       ------>ZmHOX2a(1)            -------
 
attccatctttataagaaatttgatatagctacaaaatcaatttttatggaattaaatatctaattcctctcataagctaattttagaatagaaaatgat  17192800
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AGI:  At4g36380.1   
Description:  ROT3 (ROTUNDIFOLIA 3); oxygen binding / steroid hydroxylase. Identical to Cytochrome P450 90C1 (ROT3) [Arabidopsis Thaliana] (GB:Q9M066;GB:O23242;GB:Q058J8); similar to CYP90D1 (CYTOCHROME P450, FAMILY 90, SUBFAMILY D, POLYPEPTIDE 1), oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen / oxygen binding [Arabidopsis thaliana] (TAIR:AT3G13730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48286.1); contains InterPro domain Cytochrome P450; (InterPro:IPR001128); contains InterPro domain Cytochrome P450, E-class, group IV
Range:  from: 17187531    to: 17192320    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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