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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                      --------->SPL7  ------->TEIL
                                    --------->ZAT18   <---------ARR11(3)
                                   <---------ANAC58   --------->ARR14(2)          >>>>>>>>>TBF1
                                   <---------ANAC58   <---------ARR14(2)   --------->At4g35610
          --------->ANAC46        <---------------AtSPL3                --------->LBD16
        --------->MYB52(1) <------ZmHOX2a(2)          --------->ARR11(3)------>NtERF2
    --------->YAB1       <------ZmHOX2a(1)       <---------ANAC46      ------->GAMYB
   <---------ATHB12    <---------TOE1(2)     --------->At4g35610       --------->ANAC46
   <------ZmHOX2a(2)  <---------LBD16 <---------ZAT14<---------CCA1(2) =============================
   =============================HOX2a_HOX2a  <---------At4g35610      --------->MYB46(3)
---->ZmHOX2a(1)<---------ANAC58   <---------------AtSPL8------>ZmHOX2a(2) --------->DEAR3(1)    ----
----ARR11(3)   <---------ANAC58---------->DOF2  <------NtERF2        <---------At4g35610     <------ZmHOX2a(2)
 
cctccgatcataaacggagcgtttctcaggatcagaaagcgtacagtaagcggcatggatcttcatgaattcatccgccgatgaagaagaagtccgatca  17049900
            <---------AtLEC2
          --------->HSFB2a(2)
          <---------HSFB2a(2)
      --------->O2  <---------GLK1(2)
      =========================================MYC_MYB
      --------->ANAC58
      ===========================================bZIP_DOF
      --------->ANAC58------>ZmHOX2a(2)
      <---------O2  --------->ARR14(2)
      --------->TGA1a<------ZmHOX2a(2)
      <---------TGA1a--------->GLK1(2)
      --------->bZIP60(2)
     ------>NtERF2  <---------ARR11(3)                        <-----------HVH21
    <---------ALFIN1--------->ARR11(3)       --------->ARR14(2)
  <-----------HVH21 <---------ARR14(2)       <---------ARR14(2)    ------>NtERF2
  ------>NtERF2     <-----------ARR10       <---------RAP2.6(3)   <---------ANAC46
  --------->LBD16   <---------ARR14(3) --------->SPL7        <---------O2      --------->TOE2(3)
 --------->ANAC58   --------->AGP1<---------LBD16   --------->ARR11(3) ---------->DOF2
 --------->ANAC46   --------->ARR14(3)---------->DOF2 ----------->RAV1(2)      --------->TOE1(3)
 --------->ANAC58  --------->GLK1(1) <---------MYB52(1) ------>ZmHOX2a(1)   --------->ARR14(2)
<---------LBD16    <---------At4g35610<--------P   --------->GLK1(1)   --------->MYB52(1)
================MYC_MYB ------>ZmHOX2a(1)<---------At4g35610 --------->O2   <---------ARR14(2)------
----->At4g35610   ----------->ARR10 --------->LBD16<---------GLK1(1)<------NtERF2            -------
 
gttcccgccacgtctggatggcagatcctggctaatctccggtaagccgatttgatatcctgactcgtcgcgcctaaaggaacctcaagaacatcgtaaa  17050000
                                                           <---------AtMYB61
                                                          ===================================MYC_MYB
                                                          <--------P
                               ----------->HVH21        --------->ALFIN1
                             --------->At4g35610       --------->LBD16
                             <---------At4g35610      <---------ANAC55(1)
                             <------ZmHOX2a(2)        <---------ANAC58
                         --------->LBD16              <---------ANAC58
             <-----------HVH21------>ZmHOX2a(2)  --------->HSFC1(2)
            <---------ETT(2)<---------ARR14(2)   --------->HSFB2a(1)                             ---
         --------->DEAR3(1) <---------ARR11(3)   <---------HSFC1(2)                              ---
        <------NtERF2   <------NtERF2            <---------HSFB2a(1)                      --------->ALFIN1
       ------>NtERF2   ------>NtERF2            <-----------ARR10                      <---------AtMYB61
     <---------ABI4(2) <---------LBD16          --------->GLK1(2)                  <---------TGA1a
     <------NtERF2     --------->LBD16          --------->ARR14(2)                 <---------O2  <--
    <---------ATERF1(1)<------NtERF2            <---------ARR14(2)              <---------ARR14(2) -
 <---------ZAT2    ------->GAMYB--------->At4g35610   <---------ANAC46          --------->ARR14(2)<-
 --------->At4g35610  --------->DEAR3(1)        <---------ARR11(1)             <------NtERF2     ---
 --------->ZAT2 --------->WOX13(1)              ------->TEIL<------MYB46(1)    --------->ATERF1(1)--
 <---------At4g35610 <---------LBD16           <---------CCA1(2)              --------->LBD16    <--
--------->GLK1(2) --------->MYB46(3)        <------NtERF2--------->REM1(2)   <---------ANAC46   <---
--->DAG2--------->ATERF1(1) --------->ARR14(2) <---------ARR14(1)            <---------DEAR3(1) ----
--->DOF2--------->DEAR3(2)  <---------AGP1<---------DEAR3(1)<------MYB83    <---------LBD16    -----
 
gcgaagctggcaccgtcgtcaatcgccgcgggatctgatgcagtctcggcgaatcttccgtgtaggtgtatgagcaagaggcggagacgagaggtggaga  17050100
                        --------->MYB52(1)
                   <------NtERF2
                  --------->LBD16
                 <---------DEAR3(1)
         <---------ANAC58
         <---------ANAC58
       --------->ALFIN1--------->CCA1(2)
      <---------SPL7   --------->GLK1(1)
     <---------ANAC58  <---------GLK1(1)
     <---------ANAC46 <---------ARR11(3)
     <---------ANAC58 --------->ARR11(3)
------>AGP1----------->HVH21
------>ARR14(2)  <---------ANAC46
-------ARR14(2) <------NtERF2
----->ZmHOX2a(2)<---------LBD16
-----ZmHOX2a(2) --------->ATERF1(1)     <------NtERF2
------>ARR11(3) <---------------------WRI1
------->CCA1(2)<---------RAP2.3(1)     --------->LBD16                                 --------->ANAC58
-------ARR11(3)<---------ORA47(2)     <---------DEAR3(1)                      --------->At4g35610
------GLK1(1) <---------DEAR3(1)--------->CCA1(2)----------->GT1              <---------At4g35610
----->GLK1(1) <---------RAP2.3(3)     <---------ANAC46             <---------TOE2(3)   --------->ANAC58
------>ARR10  <---------RAP2.3(2)    <---------LBD16             ---------->DOF2     ---------->DOF2
 
gatccgagccgtgcgagacggcggagatatcggagatagaggcggagaagaagagagaaatggatgagtaaaggaagttggagatgaagaaagcatcgtt  17050200
                                                  --------->HSFB2a(2)
                                      ---------->ID1
                                     <-------GAMYB<---------HSFB2a(2)        ---------->DOF2       <
                                    <---------MYB46(3)            --------->ATHB12                <-
                                    --------->MYB52(2)           --------->ICU4--------->DAG2  <----
                                    --------->MYB55(2)  <------ZmHOX2a(1)   *TSS   --------->MYB52(1)
                                  <---------MYB52(1) <------ZmHOX2a(1)    >>>>>>>>>TBF1    ---------
 
gctatatgaaacgttttcgagttttgagtttctctgcgtttgttgtttttgttcgaggaggagagggaaagattgaagaagaaaggtaatggaggggttt  17050300
                                                                                                   <
                                         <---------ARR11(3)                                      <--
                                         <---------GLK1(2)                                    ------
                                         --------->ARR11(3)    <---------ANAC55(2)            <-----
                                       <---------YAB1          --------->ANAC55(2)            <-----
                                       <---------TOE2(3)     <-----------GT1                 <------
                              ----------->GT1             <---------ICU4                    --------
                            <---------WOX13(1)           <---------AHL20(2)                 --------
---------AHL20(2)          <------------CBF              --------->AHL20(2)  --------->CCA1(2)<-----
----------TBP             --------->ATHB12           <---------AHL20(2)     --------->ARR14(2)<-----
-----AHL20(2)            <---------AHL20(2)       ----------->GT1           <---------ARR14(2)<-----
-->GT1                   --------->AHL20(2)  <---------YAB1  --------->AHL20(2)             <-------
 
aatttataggcgaagaggcgattagtcattaattggttaattaagattttgaatagtttattaattacatactaaaacggatataggggattaagttacg  17050400
                                                                  <---------ICU4
                                                                  --------->ATHB51
                                                                  -------->HAHB4
                                                                  --------->ATHB12
                                                                  <--------ATHB1
     ---------->DOF2        ------>ZmHOX2a(2)                    --------->ICU4
 ----------->GT1           <---------At4g35610                   --------->AHL20(2)
<---------MYB46(3)         --------->At4g35610             <---------ANAC46
---------ANAC46       ------>ZmHOX2a(1)                   <---------LBD16
---------HVH21        =============HOX2a_HOX2a       <---------------AGL15                         <
--->ANAC55(2)        --------->TOE1(2)               --------------->AGL15                         -
----ANAC55(2)       ------>ZmHOX2a(2)               ----------------->AGL2                    ------
----ANAC46         <------ZmHOX2a(2)                ----------------->AGL1                   -------
---LBD16          --------->ARR14(2)           <---------ANAC58  <---------AHL20(2)          -------
->CCA1(2)         --------->ARR11(3)           <---------ANAC58  <---------ATHB51            <------
->MYB52(1)        <---------ARR14(2)      ---------->DOF2--------->ALFIN1               <-----------
----ANAC58      <---------DEAR3(2)  ----------->GT1 <-----------------AGL1              <-----------
----ANAC58     --------->ETT(1)     --------->At4g35610--------->ZAT2           --------->CCA1(2)  <
----ANAC55(1)<-----------HVH21      <---------At4g35610<---------ZAT2         --------->CCA1(2)    -
----GT1    <---------DEAR3(2)   <-----------HVH21  <-----------------AGL1<---------At4g35610 -------
 
ggtcgggtaaaagtcgggtcggatcctgtgatctgagtcagataaaaaaggcttatccagttggggaaataattgcagaagagataagaatgtagtacgt  17050500
       --------->YAB1
  <---------YAB1
  <---------AHL20(2)
<---------CCA1(1)
<---------RVE1(1)
---------AHL20(1)
-------->AHL20(1)                                                            ---------->DOF2
--->TOE1(2)                                                       --------->AHL20(1)
-->ANAC58                                                         --------->ARR11(3)
-->ANAC58                                                         <---------ARR11(3)
---ANAC55(2)                                    >>>>>>>>>MYB98    --------->AHL20(2)
----AtSPL8                                     <-----------GT1    <---------AHL20(2)
----AtSPL3                              <---------YAB1            <---------AHL20(1)
---------ARR11(3)                --------->At5g28300<---------GLK1(2)<---------AHL20(2)      -------
-------->ARR11(3)         <---------ANAC46    <-----------GT1    --------->AHL20(2)          <------
-->ANAC55(2)              <-----------RAV1(1)--------->AHL20(2)--------->AHL20(2)           --------
 
aagatattattcatagtggccaaattgttctgtggctgtaattgtcattttaacatattcttacaaaaatatattaatgccaaaggaatccaatatttaa  17050600
                      <---------AtMYB61     <---------AHL20(2)         --------->At4g35610 <--------
                 <---------ANAC55(2)    --------->YAB1              --------->At4g35610 ----------->GT1
                 --------->ANAC55(2)   <---------YAB1               <---------At4g35610--------->ALFIN1
-->AHL20(2)    <-----------GT1        <-----------GT1           <----------DOF2     <---------TOE2(3)
---AHL20(2)   <---------ATHB12       <-----------GT1    --------->AHL20(2)          <---------TOE1(3)
->AHL20(2)  <---------ICU4           --------->YAB1     <---------AHL20(2)       <---------AHL20(2)
 
tttgcacagaaatactaatcacgttttggtttttagttatttatcatttttttttttttttaattttctttagcagaagagtattttaaggtggaaattc  17050700
                 <---------YAB1
                 <---------ANAC46
      <---------HSFB2a(1)
      --------->HSFC1(2)
      <---------HSFC1(2)
      --------->HSFB2a(1)                             --------->ATHB12
     --------->ARR11(3)              <---------AHL20(2)               --------->ANAC58
     <---------ARR14(2)    <---------AHL20(2)        <---------AHL20(2)                            -
     --------->ARR14(2) <---------GLK1(2)            <---------YAB1   --------->ANAC58        <-----
     <-----------ARR10  --------->ARR11(3)          --------->AHL20(2)--------->ANAC55(2)    -------
     --------->GLK1(2)  <---------ARR11(3)          <---------AHL20(1)----------->GT1        -------
    <---------GLK1(2) ----------->ARR10          --------->AHL20(2)   <---------ANAC55(2)    -------
 --------->YAB1<-----------GT1     <----------DOF2  --------->AHL20(1)--------->ANAC55(1)    <------
-GLK1(1)   <---------YAB1<---------RVE1(1)--------->YAB1    <---------ANAC46                 <------
 
gaaattagaatcttcttattacgagtagatttttttttcttttatttataaaaaatataattggtgtatggagacgtaatttggaccatgtattgtttgt  17050800
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AGI:  At4g36040.1   
Description:  DNAJ heat shock N-terminal domain-containing protein (J11). Identical to Chaperone protein dnaJ 11, chloroplast precursor (ATJ11) [Arabidopsis Thaliana] (GB:Q9FYB5;GB:O65641); similar to DNAJ heat shock protein, putative [Arabidopsis thaliana] (TAIR:AT2G17880.1); similar to DnaJ-like protein [Phaseolus vulgaris] (GB:AAB36543.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609)
Range:  from: 17049174    to: 17050277    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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