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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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          <<<<<<<<<<WRKY18
          --------->ANAC58
          --------->ANAC58
  ------>NtERF2
 --------->DEAR3(1)
----->NtERF2                                                       <---------AHL20(2)
-------->LBD16                                                 <---------AHL20(2)
------->DEAR3(1)          ---------->DOF2                      --------->AHL20(2)
------ATERF1(1)  --------->ALFIN1  --------->YAB1         --------->AHL20(2)          <------ZmHOX2a(1)
-->ZmHOX2a(1)  <---------O2   --------->ARR11(3)   <----------DOF2 --------->AHL20(2)----------->GT1
 
tccgccgagagtcaagtcaagtggaagaaaaaagacattgaaaatcacagaaaacttttaagtaaattaaaaaaatggagagagagagaggaaacaatat  17014900
                                                   --------->ANAC58
                                                   --------->ANAC58
                                                   --------->ANAC55(2)
                  --------->ICU4       <---------DAG2  <---------GLK1(1)
                  <---------ATHB12     <----------DOF2 --------->GLK1(1)
           --------->RAP2.6(3)      <-----------GT1--------->ANAC46
          --------->ATHB12    --------->MYB46(3)  <---------LBD16
       --------->ANAC55(2)  --------->MYB52(1)  <---------REM1(2)    --------->YAB1     --------->AHL20(2)
 
tggaatgctcacatgatggcaatgaagaagacaaccgatatactttttctcttcacggatttctatatactataacaaaattacccaaaaaaaaaatgga  17015000
                                                          <------ZmHOX2a(1)
                                                        --------->LBD16
                                                       --------->HSFB2a(2)
                                                       <---------HSFB2a(2)
                                                 <---------ANAC55(2)
                                                 --------->ANAC55(2)
                                                <-------TEIL
                                               --------->ARR14(1)
              >>>>>>>>>TBF1                    --------->CCA1(2)                 <---------GLK1(1)
           >>>>>>>>>TBF1                      --------->ARR14(2)                 --------->GLK1(1)
        >>>>>>>>>TBF1                         --------->ARR11(1)         ----------->RAV1(2)
 <---------ANAC58  --------->ZAT6             <---------ARR14(2)         --------->ZAT2          ---
 <---------ANAC58 --------->ZAT18  <------ZmHOX2a(1)   <---------LBD16--------->MYB46(3)         <--
 
aaatgcttgaagaagaagaagaacactactcaagtctaggaattacagagatacgtttccaggaaaatgcaaaaccacctggagatttcttcaaaatatg  17015100
               --------->AtLEC2
               --------->ANAC46
          --------->GLK1(2)
         <---------ARR14(2)
         <---------GLK1(2)
         <---------ARR11(3)
         --------->ARR14(2)
        --------->HSFC1(2)
        --------->HSFB2a(1)
        <---------HSFB2a(1)
        <---------HSFC1(2)      <---------ZAT6                                       ------->TEIL
       ----------->ARR10        ----------->GT1                               <----------DOF2
------>At4g35610        --------->REM1(2)          --------->CCA1(2)      ---------->ID1
-------At4g35610    <------------AtMYB77         <------NtERF2  <---------MYB52(1)--------->ANAC55(2)
 
agcagagaagaagattctatgcaactgtgaagggagagttaaatccagaggcagagatgagaagacggtttgtttttgtcgatttatgtatttctctcat  17015200
                                        <---------At4g35610
                                        --------->At4g35610
                                        --------->GLK1(1)
                                        --------->ZAT2
                                        <---------ZAT2
                                      <------NtERF2                <-----------GT1
                                    <---------DEAR3(1)         <---------DAG2
                                  <-----------HVH21         ------>ZmHOX2a(1)
                                 --------->O2             *TSS <----------DOF2
             <---------ALFIN1    --------->TGA1a  --------->DEAR3(1)
           <---------ALFIN1      =========================================bZIP_DOF
    =======================================bZIP_DOF    <---------ALFIN1
    <----------DOF2              <---------TGA1a  --------->RAP2.3(3)             <-----------GT1
===========================================bZIP_DOF  <---------ALFIN1        ------->TEIL      -----
<----------DOF2                <---------ALFIN1  --------->ATERF1(1) <-----------GT1           -----
 
tagctttctttctcccacaccttcttcacttgccactcgtcggagctcaagagcccccccatcctgcttttttctccatgtatttttacccataggccca  17015300
                                                            --------->DAG2
                                                           ---------->DOF2
                                                        --------->TOE1(3)
                                                        --------->TOE2(3)
                                                        --------->YAB1
                                                     <<<<<<<<<GT-1
                          <-----------RAV1(2)        <-----------GT1                               -
                         ----------->RAV1(2)    --------->AHL20(2)                                 <
               ------------>CBF                 <---------AHL20(2)--------->YAB1                ----
---->ANAC58    <---------YAB1                <---------AHL20(2)  <-------TEIL  <---------------AGL15
---->ANAC58  <-----------GT1      <----------DOF2<---------AHL20(2)  --------->AHL20(2)    <--------
 
gcaaaactctctctaattaccaatgtgcccctggtgacttttctgtttttatttattaaccataaagtttcataaattctagctacaagtagttaatgta  17015400
                                                                          --------->AHL20(2)
                                                                          <---------AHL20(1)
                                                                          --------->AHL20(1)
                                                                       --------->YAB1
                    --------->ANAC46                                   <---------AHL20(2)
              <---------ANAC46                                      --------->YAB1
       ------->MYC3 <---------ANAC58                             --------->TOE1(3)
       <-------MYC3 <---------ANAC55(2)                          --------->TOE2(3)
      --------->ANAC46----------->HVH21     <----------DOF2 -------->HAHB4--------->ARR11(3)
  <-----------GT1   <---------ANAC58       --------->TOE2(3)--------->YAB1<---------AHL20(2)
-------->MYB52(2)--------->ARR14(2) --------->AHL20(2)     <---------ATHB12
---------MYB46(3)<---------ARR14(2)<---------AHL20(2)      <---------YAB1 <---------ARR11(3)    ----
-------->MYB.PH3(2) --------->ANAC55(2) <-----------GT1   <---------TOE2(3)            <---------TOE2(3)
-TOE2(3)  --------->ATHB12         --------->AHL20(2)<------ZmHOX2a(1) --------->AHL20(2)    <------
 
gtttgttacacgttgatgggtatacgtgacattgctaaataaataacctttgtgtaggactaatgataccttaataatatattggagtttgagattataa  17015500
                                                                                  --------->ETT(1)
                                                                                 --------->RAP2.6(3)
                                                                               <---------MYB46(3)
                                                                             <---------ANAC58
                          --------->ANAC55(2)                           --------->ATHB12
                <----------DOF2                                        <---------YAB1   --------->AHL20(2)
      <---------TOE2(3)<---------MYB52(1)                              <---------AHL20(2)
   <---------MYB52(1)------>ZmHOX2a(1)                              <----------DOF2 <------NtERF2
------>DOF2  <-----------GT1                                   ---------->ID1<---------ANAC58
---YAB1 <---------GLK1(2) <---------ANAC55(2)              <----------DOF2  <---------MYB46(3)
 
aaagccgttgagattatcactttcctgttaagtattgtcttacaaaaattttaaaaatgtgactttgttgtctttttattggttgtcggcataaaatgac  17015600
                                                 <-----------HVH21
                                                --------->O2
                                                --------->bZIP60(2)
                                                <---------bZIP60(1)
                                                <---------O2
                                                --------->bZIP60(1)
                                              ------->GAMYB
                                        --------->ANAC58
                           ---------->ID1 <------NtERF2
                    <---------AHL20(2)  --------->ANAC46
                    <---------ICU4      --------->RAP2.6(2)
                    --------->AHL20(2)  --------->ANAC58
                   --------->ICU4    --------->ANAC46
              ----------->GT1        --------->DAG2
             <---------TOE2(3)      ---------->DOF2                                 ------->TEIL
 
ttcgtttgaaacgaataatgtaattttttcgtcgtaatataaggcgcaacgacgtcaaatattgatatttgttttaagttgtatatgtatatatgaacaa  17015700
                                                                                          <---------ANAC58
                                                                                  <---------ANAC58
                                                                                  <---------ANAC46
                                                                                  <---------ANAC58
                                                                                  <---------ANAC55(1)
                                                                              <-------PIF5<---------ANAC58
                                                                             <---------ZAT2  <------
                                                                           <-----------RAV1(2)
                                  ----------->HVH21              --------->LBD16  --------->ANAC55(2)
                               --------->LBD16                  <---------HSFB2a(2)  <---------ARR14(2)
                           --------->ARR14(2)                   --------->HSFB2a(2)  --------->ARR14(2)
                           <---------ARR14(2)                  ------>ZmHOX2a(2) <------NtERF2
                          <---------CCA1(2)                ------>ZmHOX2a(1) --------->ZAT2<--------
                          <---------GLK1(1)                ----------->HVH21 <---------At4g35610
                         ------->TEIL--------->MYB46(3)  ----------->RAV1(2) --------->At4g35610
              ---------->DOF2 <---------ANAC58           ----------------->AGL1<---------DEAR3(1)
          <---------ARR11(3)  <---------ANAC55(1)        <-----------------AGL1--------->ALFIN1    -
          --------->ARR11(3)  <---------ANAC58--------->GLK1(2)<---------LBD16------->PIF5<---------ANAC46
 
ttccaatggctaaaatctaaagtttatgtatatccgtgtgaccactgagaattttgaaactcctgatcgggaaaacttgcaggtggcgtattggcgttcg  17015800
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AGI:  At4g35920.1   
Description:  MCA1 (MID1-COMPLEMENTING ACTIVITY 1). similar to MCA2 (MID1-COMPLEMENTING ACTIVITY 2) [Arabidopsis thaliana] (TAIR:AT2G17780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43166.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461)
Range:  from: 17011791    to: 17015259    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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