Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->AHL20(2)                                                                 <---------ATHB51                                                            --------->ANAC58                                                            --------->ANAC58                                                            --------->ANAC46  --------->ARR11(3)                                                          <-----------GT1     <---------GLK1(2)                                                --------->LBD16  <---------ATHB12        <---------ARR14(2)         <---------WOX13(1)   <---------AHL20(2)  ----------->ARR10   --------->LBD16               --------->ATHB12  <----------DOF2-------->ATHB1                  <-- ---->ANAC58                    <---------YAB1 <---------RAP2.6(2)--------->ATHB51       --------->TOE2(3) ---->ANAC58                 <----------DOF2  <---------LBD16    --------->ICU4          --------->TOE1(3)   gtacccagagtattttgacacattctattgacttttgattgaaacatgtccggcttaatttaacgcaattattcagtttagattttgaacaccttaaatg  16892500                 <---------YAB1               --------->YAB1              <------ZmHOX2a(2)             <---------ARR11(3)             --------->ARR11(3)        <-----------GT1    <----------DOF2          --------------->AGL15  <---------At4g35610         <---------At4g35610   <---------ANAC58          ========================================================================   <---------ANAC58   ------------>CBF   ------>ZmHOX2a(1)           <---------YAB1           ------- ----------CBF==================================HOX2a_HOX2a    --------->AHL20(2)             <------   aattggcttttaacagatcataatatcaataccagttttagtccttgagaactcagcccatgacttaaaatatgaaaacttcagcccatgacttaataaa  16892600                                                                         <---------ATHB51                                                                ------>MYB46(1)                                                              <---------MYB59                              --------->YAB1                 ----------------->AGL1           ----------------->AGL2                       --------->At4g35610           ----------------->AGL3                      --------->GLK1(2) --------->ICU4           ===================================================================MADS_MADS  ---------->DOF2             --------->ATHB12     --------->YAB1<------------CBF ===========================MADS_MADS             <---------YAB1------>MYB83<---------YAB1       ---- -->AHL20(2)                ------->TEIL  <---------AHL20(2)<-----------------AGL1               <--- ---AHL20(2)<---------------AGL15         <-----------GT1   <-----------------AG     ----------->GT1   tgaacaaagagaacccaaaaacagaaaatgaatcatggacatatttacatatatcataatctgaccaaattggaaattatgctcaaatgcttaatattcc  16892700                                                                               --------->ALFIN1                                                                              <-------MYC3                                                                              ------->MYC3                                                                              <-------MYC2                                                                              ------->MYC2                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                             ========================                                                                             --------->TGA1a                                                                             ========================                                                                             <---------TGA1a                                                                           <---------ANAC58                                                                           <---------ANAC58             ------>MYB46(1)                                           <-----------HVH21             ------>MYB83                                             <---------ANAC58           <---------MYB59                                <---------DAG2--------->ATERF1(1)        <-----------GT1                                   =============================bZIP_DOF   <-------TEIL                 --------->YAB1            <----------DOF2  <---------ANAC46   <------ -->ZmHOX2a(1)                  <---------ICU4      <-----------GT1   <---------ANAC58     --------->At4g35610 ------At4g35610    --------->MYB46(3)         ------------>CBF      <-------TEIL          <---------At4g35610   tctgattcatttaccaaattcaacctctgtagaatcattctaaacaaaattcaattaccacttttcagacatgcgtcgcgcgtgtgagtgtttagctaca  16892800                                                                                 --------->ANAC55(2)                                                                                 --------->HSFB2a(2)                                                                                 <---------HSFB2a(2)                                                                                 <---------ANAC55(2)                                                                                 <---------ANAC46                                                                             <----------DOF2                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                           <-------TEIL                                                                         <-------PIF5                                                                         ------->MYC4                                                                         <-------MYC3                                                                         ------->MYC2                                                                         <-------MYC4                                                                         ------->MYC3                                                                         <-------MYC2                                                                         ------->PIF5               -------->P                                                <-------PIF4 <---------HSFB2a(1)            --------->ABI4(2)                                            ------->PIF4 --------->KAN4(1)         <---------ANAC46                                               --------->O2  <---------KAN4(1)         <------MYB46(1)                                                ================bZIP_DOF         <------MYB83                                                   =============================         <---------ANAC58                              --------->ANAC46 =============================         <---------ANAC58                              --------->ANAC58 <---------TGA1a--------->KAN4(2)        <---------MYB46(3)                            <---------TOE1(2) --------->TGA1a<---------ARR14(2)        --------->MYB46(2)                    ====================================MYC_MYB      <-----        --------->MYB52(2)                    -------->P                <---------O2 ---------->TaMYB80    <---------MYB46(3)       --------->At5g28300   --------->ANAC58   <------------OsbHLH66   <------    <------MYB83            ----------->GT1 <---------MYB111(1)       <---------ALFIN1--------->HSFB2a(1)    <------MYB46(1)      <---------ALFIN1   --------->MYB46(3)       -------->P <---------LBD16<----- <---------ANAC58 --------->ANAC46      <---------MYB59--------->ANAC58------------>OsbHLH66  <------ <---------ANAC58------->GAMYB<---------MYB52(1)   --------->ANAC58  <---------REM1(2)<----------TaMYB80 ========================MYC_MYB       --------->ANAC55(2)        <---------ANAC58   <---------KAN4(2) =======================MYC_MYB      <-----------GT1 <---------ALFIN1=============MYC_MYB    -------- -TEIL  <---------DEAR3(1)  <---------ZAT6  <---------MYB52(2)    <---------ANAC58--------->LBD16   -   tgggcttggttcggtgcaacccgcttcccactgttaattttacataactaccctcgcacgctccgcttgcctacacgtgcgttccggaatattctgcctt  16892900                                             <---------ANAC58                                             <---------ANAC58                                             <---------ANAC46                                         <---------DAG2 =====bZIP_DOF                           <----------DOF2 ====bZIP_DOF                           <-----------------AGL3 -----DOF2                              ============================================================= ---DAG2                             <---------MYB59 ----DAG2   <---------MYB46(3)    <-----------GT1                 --------->YAB1           --------->TOE1(2) ----DOF2  <---------AtMYB61     <-----------GT1            --------->ANAC55(2)            --------->TOE2(3) --------->AGL1        ----------->GT1 ------>MYB46(1)    <-----------GT1                  --------->TOE2(2) ---------->GT1     --------->MYB52(1) ------>MYB83  <---------DAG2               <-------TEIL  <----   tttggtaatttcgatggtggaccaagggtaaaattttaacctacttttcttggagccttttcacttaatgacaaacgcttcaagtacataaaaccttgga  16893000                                                       <---------DAG2                                             <---------AHL20(2)                                          <---------ARR11(3)                         ----------->GT1  <---------AHL20(2)                   --------------->AGL15  --------->ARR11(3)                   <---------------AGL15  --------->AHL20(1)                --------->ZAT6       >>>>>>>>>>GT-3b   <----------DOF2        <---------ARR14(2)        ----------->GT1 --------->AHL20(2)        <---------GLK1(2)------------------------>ANAC81        --------->ARR14(2)        <----------ID1  <---------AHL20(2)        --------->ARR11(3)<----------ID1  --------->AHL20(2)         --------->ARR11(3)        <---------ARR11(3)----------->GT1 <---------AHL20(1)         <---------ARR11(3)    <---------At4g35610---------->DOF2   --------->AHL20(2)   <---------YAB1 ==================================MADS_MADS --------->AHL20(2) <<<<<<<<<MYB98      <----------DOF2 -----GLK1(2) <-----------GT1   ---------->DOF2--------->YAB1<---------TOE2(3) <---------At4g35610   ttcttctgcagatttttcacactaaaaaaggaaaaaaagaaaaatatattaataaaacttttttatgttaaaatcttgggcttctgcttttgcgactctt  16893100                                                             <---------TOE2(3)                                                           ---------->DOF2                                  --------->ANAC46      --------->ANAC46                            --------->TOE2(3)           --------->ANAC58                       ------>ZmHOX2a(1)                --------->ANAC58                      --------->TOE2(3)                <---------LBD16                      <---------ANAC55(2)             --------->At4g35610                          --                  --------->KAN4(2)               <-----------HVH21                         <--------                 <---------HSFB2a(1)        --------->HSFB2a(2)                             ---------                 --------->HSFB2a(1)        <---------HSFB2a(2) <--------P           --------->GLK1(2)     <---------LBD16  --------->TOE1(3)<---------MYB52(1)--------->LBD16            <---------GLK1(2)   ggtcttcttcggacatggcacattccttaacctcactcgccgttttccagagcgtcatccgcaaaggtaagtcaaaactctgactagaatctcgaatcgg  16893200        <---------LBD16    ----------->GT1                                       <---------ANAC58 ------->ETT(1)    ----------->GT1                                               <---------ANAC58 -ARR14(2)        <---------WOX13(1)                                             <---------AtLEC2---- >ARR14(2)    --------->ETT(1)   <---------AHL20(2)                       <------ZmHOX2a(1) ------->TEIL   gtcggaatgactcgggtcggattgaaaaatggtttttattttgtttctatgggttttgttaatgcagagatggtgaggagtttgcatgtctatgaatcgg  16893300                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              -------                                                                                           --------->LBD16                                                                                        --------->MYB52(1)                                                                                       <---------SPL7                                                                                       ------>NtERF2                                                                                      --------->ETT(2)                                                                                      ----------->HVH21                                                                                      <---------ETT(2)                                                                                      --------->DEAR3(1)                                                                                  <---------LBD16                                                                               <---------GLK1(1)                                                                               --------->GLK1(1)                                                                              --------->ARR11(3)                                                                              <---------ARR14(2)                                                                              <---------ARR11(3)                                                                     <---------SPL7  --------->ATERF1(1)                                                                    <---------ANAC58--------->LBD16                                                                    <---------ANAC58------>NtERF2                                                          --------->HSFC1(2)  --------->ARR14(2)                                        <---------ANAC46  --------->HSFB2a(1)--------->HSFB2a(1) ----                                     <---------MYB52(1)   <---------HSFC1(2) <---------HSFB2a(1)<---- ----->ALFIN1<---------GLK1(1)---------->DOF2     ---------->DOF2<---------MYB52(1)<---------LBD16<--   tggagattgagagagagttctggttcaagagcaaaagctgttatgtagagaagaaagcgaagcctctgtttcgttcggaagatttccggcgaccggagat  16893400  Previous    Next  AGI:  At4g35589.1    Description:  unknown protein Range:  from: 16892771    to: 16892908    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g35590.1    Description:  RWP-RK domain-containing protein. similar to RWP-RK domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G18790.1); similar to hypothetical protein OsJ_015134 [Oryza sativa (japonica cultivar-group)] (GB:EAZ31651.1); similar to OSJNBa0017B10.3 [Oryza sativa (japonica cultivar-group)] (GB:CAE03088.2); similar to Os04g0564000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053566.1); contains InterPro domain Plant regulator RWP-RK (InterPro:IPR003035) Range:  from: 16892914    to: 16894870    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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