Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <-----------HVH21                                                         ------                    ------->GAMYB                                                       --------->GLK1(2)                  <---------At5g28300                                              --------->At4g35610                 --------->MYB52(1)                                                <---------At4g35610            <---------AHL20(2)                                                    --------->ANAC46            --------->AHL20(1)                                                   <---------LBD16            --------->AHL20(2)             <-----------GT1                   <---------ARR11(3)<-----      --------->AHL20(2)                  <-----------GT1        --------->WOX13(1)--------->LBD16     --------->AHL20(2)   ----------->RAV1(1)      <---------AHL20(2)        --------->ARR11(3)------   --------->YAB1<-----------GT1         <---------AHL20(2)   --------->ANAC58 ------>ZmHOX2a(2) ----->TOE1(3)   <---------DOF5.7(2)    --------->YAB1        --------->ANAC58<---------GLK1(1)<----- -->DOF2   --------->AHL20(2)     --------->ZAT6  --------->AHL20(2) --------->MYB59   <---------GLK1(2)   cttaaaaataaaaaaaaattaacggtcacaacacaaacactattttaacttataaaatggaaataggcaattaggcattgatctccgcagaatctattgc  16845900     --------->ZAT18  <---------ANAC58  <---------ANAC58 <---------STY1(2)                            <---------HSFC1(1) --------->ZAT2                               --------->HSFB2a(2)                              ------ --------->STY1(2)                            <---------HSFB2a(2)                              ------ --->ZAT18                                    --------->HSFC1(1)    --------->TOE2(3)  <---------ANAC55(2) ----ZAT18            <----------DOF2    ---------->ID1 --------->At4g35610    --------->WRKY18(1) --->ZAT14         <-----------GT1 <----------DOF2      <---------At4g35610  ----------->GT1   <----- ----ZAT14 <---------YAB1          <---------DAG2   --------->GLK1(2)  <---------ICU4 <-------TEIL<--   actagcttgcactatgtttattcactttaatctcaccctttttgtcttctcgaaaatcagttgataatatccataaatacggtcaaaatacgtagaaaat  16846000                                                    <---------ARR14(2)                    --------->ANAC46                                                    --------->ARR14(2)                    --------->ANAC58                                        <---------ANAC46                                  --------->ANAC58                                        <---------ANAC58                                 <---------TOE1(3)        ----------->GT1                 <---------ANAC58                      ------>MYB46(1)      <-     <------ZmHOX2a(1)                  --------->ANAC55(2)                   ------>MYB83--------->ANAC55(2) --->TOE1(2)                            <---------ANAC55(2)                 <---------ALFIN1<-------- --->ARR14(2)                   ----------->GT1 <-------TEIL   --------->ANAC58         <---------DOF5.7(2) ----ARR14(2)          ----------->GT1  ----------->GT1        --------->ANAC58        <-------TEIL<- -------YAB1       <---------ZAT14    --------->MYB52(1)     ---------->DOF2--------->AtMYB61   <----   acgataaggagagtgtaatagtatagggagaaaatgggaataacgtgatatacatatccacagataagcaataggtcaccatcccacggttcacgttatt  16846100   <---------DEAR3(2)   <---------MYB46(3)                  --------->TOE2(3)                                <---------TOE2(3)  <---------DEAR3(1)             --------->YAB1            <---------ICU4             <---------AHL20(2) <---------MYB52(1)             <---------ZAT6         <---------YAB1         <---------AHL20(2)    < --------ANAC58            ------>ZmHOX2a(1)   <---------TOE2(3)              --------->AHL20(2)    < -MYB52(1)         <---------AHL20(1)  --------->YAB1 --------->AHL20(2)   --------->YAB1           - --------ANAC58    --------->AHL20(2) ----------->GT1--------->AHL20(2)<----------DOF2--------->AHL20(2) -------GT1        <---------AHL20(2)<---------TOE2(3)<---------AHL20(2) --------->AHL20(2)        <-   tccgtcggtttttaaaatcaaaaaatttcctctactgataatgttaattaagaaattaaaattatgtcttcaacttttaataaaacaattaatgaaaaac  16846200                                                               <--------HAHB4                                                               -------->ATHB1                                                               <---------ICU4                                                               --------->ATHB12                                                               --------->ATHB51                                                               --------->YAB1                                                              <---------ATHB12     <---------YAB1                                       ------------>CBF   --------->ATHB51                                 --------->DAG2   --------->ATHB12                       <---------AHL20(2)  --------->ICU4   <---------ICU4                         --------->AHL20(1)  <---------YAB1  <---------YAB1                         --------->AHL20(2)   <---------ATHB51                      -  --------->ICU4                     <---------AHL20(2)  --------->ANAC58                          -- --------HAHB4               ------------>CBF      ---------->DOF2                          >>>>>>>>>TBF1 ---------ICU4      <---------ZAT6   --------->AHL20(2)  --------->ANAC58  <---------ARR14(2)  >>>>>> -------->YAB1 --------->TOE2(3)  --------->YAB1<---------TOE2(3)<---------YAB1         --------->At4g35610 --------YAB1<-------TEIL   --------->YAB1--------->AHL20(2)--------->WOX13(1)       --------->At4g35610   tatcattattgtagtttcattagtgacaaatgacaatattaaaaaaaattaagaaaagtaagcaattattagttgaagaactgaagaagcagaagaagaa  16846300                                                                                                    -                                                                                               <-----                                                                                             --------                                                                                            <--------       >>>>>>>>>TBF1                                                                      <---------AHL20(2)      *TSS      ----------->GT1                                                          --------->AHL20(2)   --------->At4g35610                                                                   --------->ICU4 -------->At4g35610                                                               <---------At4g35610 ---------------------->ANAC81                                                    --------->ZAT2    - >>>TBF1  >>>>>>>>>TBF1   >>>>>>>>>WRKY18                                         --------->At4g35610   gaagcagaagaagaagaagagaaaattttgacagagataatacacagatagagagaagagacagagacagagagtgatggaaacagctgtatttattatg  16846400                                                                              --------->ANAC58                                                                              --------->ANAC58          ------->TEIL                                                        --------->ANAC46         <---------GLK1(2)                                                   --------->ZAT18         --------->ARR14(2)                                                  <---------ZAT18         <---------ARR11(3)                                                --------->ZAT14 -------->ANAC58                                                           <---------ZAT18 ----YAB1<---------ARR14(2)                                                --------->ZAT18 ->YAB1--------->ANAC58                               <----------DOF2   ---------->DOF2 -YAB1 --------->ANAC58                       ------>ZmHOX2a(1)      <----------DOF2 -------->ANAC58                         <----------DOF2          <---------ALFIN1           --------   agacgaaacaagaacctctgggtttctacttaaactcttctctctttcctctctcactttaaaaatccacactttagagcacacaatacaaaaaataagg  16846500                     --------------->AGL15                     <---------------AGL15                    ----------------->AGL1                    ----------------->AG                                                     <-------              <---------MYB52(1)                                                           --------->YAB1            <---------ANAC58                                                   <---------MYB46(3) ---        <----------DOF2                                                       --------->ALFIN1    <--     <---------ARR11(3)                                               ------->GAMYB        <---------ICU4  <----------DOF2   <-----------------AGL1                           --------->ANAC46     <---------ATHB12 ->MYB52(1) <---------ANAC58              --------->AtLEC2         --------->MYB52(1)     --------->ICU4   gtttctttatcttttcgtttcttccaaattttgtaatggatttgatgcaaatggataagcgtttggattcaacggagcaagtggttgaagaaatcatgag  16846600               --------->ANAC58               --------->ANAC58               --------->ANAC46              <---------LBD16            -------->P            <---------REM1(2)        ------>ZmHOX2a(2)        =========================HOX2a_HOX2a       --------->GLK1(1)       ==========================HOX2a_HOX2a      <---------ARR11(3)      <---------AGP1      --------->ARR14(2)      --------->ARR11(3)                      ------>NtERF2      <---------ARR14(2)                   --------->At4g35610                                  -----     <---------CCA1(2)                     <---------ZAT2                                       ----- <-----------GT1                           <---------At4g35610                   <------ZmHOX2a(2) --YAB1<------ZmHOX2a(2)  <------ZmHOX2a(1)--------->ZAT2  <---------WOX13(1)   --------->ARR11(3) ------>ARR14(2)       <---------LBD16 <---------REM1(1) --------->ATHB12       <---------ARR11(3) -------ARR14(2)--------->LBD16 <---------TOE2(3)       <---------YAB1   ---------->DOF2        -----   aattcacagatctctacccgcaagaccaggaattgacgaagttgaagctgccaagggtttgattgacaacgttgagaaagaagatcaagcttgtttagaa  16846700                                            <---------AtLEC2                                        <----------DOF2                            <---------ARR14(2)    <---------ANAC58        --------->ARR14(2)          --------->ANAC58    <---------ANAC58        --------->ARR11(3)          --------->ANAC58                  ---------->DOF2 ---->ANAC58     --------->DAG2       <---------At4g35610                           <---------ANAC46 ---->ANAC46    ---------->DOF2 ------>ZmHOX2a(1)<---------REM1(1)                  <---------ANAC58 ---->ANAC58  <------ZmHOX2a(1)<---------ANAC46  --------->ALFIN1    ----------->GT1<---------ANAC58-   gccattgctagacagaggaaaagctctgaagttcctggtgagcttttcatggtgttgcaagaaatgaagaagggttatgttcagtttcgtagcaaagaac  16846800  Previous    Next  AGI:  At4g35470.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G17440.1); similar to PSR9 [Brassica nigra] (GB:AAM10777.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71692.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype (InterPro:IPR003591) Range:  from: 16846306    to: 16849155    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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