Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  =========================RAV                                                                <-----------RAV1(2)                                                           <---------MYB52(1)                                                          --------->TOE2(3)                                                         <---------O2                                                         <---------TGA1a                                                         --------->ANAC46                                                         --------->ANAC58                 --------->YAB1                                                         --------->ANAC58         <------MYB83                                                         =============================MYC_MYB                                                         --------->TGA1a          <---------ANAC46                                                         --------->O2             <------MYB46(1)                                                    --------->ZAT2               <---------MYB46(3)                                                    --------->At4g35610          --------->MYB59                     --------->YAB1                 <---------At4g35610       <-------GAMYB                    <-------TEIL                    <---------ZAT2           <-----------RAV1(1)<----             <---------ANAC55(2)                <---------DEAR3(1) <------ZmHOX2a(1)     <---------YAB1             <---------TOE2(3)             <---------MYB52(1)--------->MYB52(2)<---------MYB52(1) <--   cttatgtgagagattaagtatgttcataacttcacaattgtgtccattagtcgctgctcacgttagtcaggagttatttctgttgggtcttatcaaaact  16832100                                                                             <XXXXXXXXXXXXXXXXXXXMIR156G                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                      --------->AHL20(1)                              <----------DOF2                         <---------AHL20(2)        <----                             --------->TOE2(3)                        --------->AHL20(2)  <---------MYB52(1)                           -------->P                    --------->TOE2(3)  <---------ANAC58   ------              <---------YAB1 --------->TOE1(3)      <---------YAB1   --------->AHL20(2)  <-------GAMYB -------RAV1(1)        ------->TEIL                <-----------GT1   <---------AHL20(2) <-----------RAV1(1) -------MYB52(1) <---------YAB1             <---------AHL20(2)   <---------YAB1    <----------DOF2---   gttgtttatgtctattttgattatggacttacctttacatttgcattttatattttcattcttagttataaaaaaattgcttatacttttctgttgtttg  16832200                                                                                      <---------ARR11(3)                                     --------->TOE1(2)                  --------->AHL20(2)          <                                     --------->TOE2(2)         <---------WOX13(1)     --------->GLK1(2)          --------->YAB1  <---------AHL20(1)                 --------->ATHB12         --------->ARR11(3)  --------->ZAT2          <---------AHL20(2)                --------->AHL20(2)    --------->YAB1  <--  <---------ZAT2          --------->AHL20(2)                <---------AHL20(2)  --------->AtLEC2  --- -----WRKY18(1)       --------->AHL20(2)            <---------HSFB2a(2) --------->ATHB51          --- ----->HVH21          --------->YAB1 --------->TOE2(3)  <---------TOE2(3)    <---------YAB1      <--- ----->ZAP1  --------->YAB1         <---------ANAC55(2)--------->YAB1   <---------AHL20(2)       ----   acccagcaccaagtataagaacaattaaaaaatttgatacctaagaaactaattctataagattaattgaagaattattttcattcaaaatcttttgaca  16832300                                                             <--------ATHB1                                                             <------------ATHB5                                                             --------->YAB1                                                             <---------ICU4                                                            <---------ATHB51      <---------ANAC46                                      --------->ICU4 ---------WOX13(1)                                  <---------ICU4 -------ICU4                                       <---------YAB1                                <--- ------>ATHB51                                    <---------ARR11(3)        --------->ZAT2       <--- ------>ATHB12                                    --------->ARR11(3)        <---------At4g35610  <--- ------YAB1                                     ----------->GT1  <----------ID1              <------- ----->ICU4          --------->ZAT18   <---------TOE2(3)    <---------ATHB12--------->At4g35610  <---   taattgctacgtttaatgtgtaatgccctggtctattcgataagattaagaagataattgcaataatggaacaaaattagctgagaatgcaatccgtttg  16832400          --------->ANAC46          --------->ANAC58          --------->ANAC58         <---------LBD16     <---------ETT(1)     ----------->HVH21    --------->DEAR3(2)    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  ------->TEIL  --------->ARR14(2)                     --------->YAB1  <---------ARR14(2)        --------->AHL20(2) ------ANAC58           <---------MYB52(1)------------>CBF    --------->ANAC46                     <- ------ANAC58   ------------>CBF    <---------AHL20(2)  <-----------HVH21                        <--- ------AtLEC2  --------->ANAC58   <---------ANAC55(2)----------->RAV1(2)                      <------ --MYB52(1)--------->LBD16  <---------AHL20(2)   <-----------GT1       ----------->HVH21   --------->GLK1(2) ------ANAC46  --------->ANAC58--------->ICU4  --------->YAB1 ----------->HVH21     ---------->DOF2<-   catggatccgacccggaatgcaatccgtttttaattatgtaaatgacaattatacccctggcactcgacatgtttgacagtttgagcaaagagaattttt  16832500         <---------ARR14(2)         --------->ARR11(3)                                                ----------->GT1         --------->ARR14(2)                                               <---------YAB1         <---------ARR11(3)                                             <---------ICU4              <        <------ZmHOX2a(1)                                               --------->YAB1           ----      *TSS<------ZmHOX2a(2)     <---------GLK1(1)                      <---------ATHB12         <----      <---------TOE2(3)     --------->HSFB2a(2)                   --------->ANAC58         ------>ZmHOX2a(2) --------ANAC58             <---------HSFB2a(2)   <-----------HVH21    --------->ICU4    <---------ARR14(2) --------GT1               <---------LBD16    <---------ARR14(2)  --------->ANAC58       <---------ARR11(3) ---AHL20(2)             --------->GLK1(2)    <---------GLK1(2)   --------->ANAC55(2)    --------->ARR14(2) --------ANAC58     <---------YAB1            --------->ARR14(2)  <---------ANAC55(2)    --------->ARR11(3)   ttcttgttgaggatcatcgattatcagtttctggatttcgctactacagatttgtcccgtcttgagttacgaaatcatggtaacaatgctcgatcttcga  16832600                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                -----                                                                                                <----                                             <-------TEIL                                    --------                                            <XXXXXXXXXXXXXXXXXXXXMIR3933             ------>ZmHOX2a(2)                       <---------ARR14(2)  <---------ARR14(2)                       <---------At4g35610                   <---------LBD16         --------->ARR14(2)                       <---------GLK1(1)             <---------At4g35610     <---------At4g35610                           --------->ARR11(3)        <---------YAB1 --------->ARR14(2)  <---------GLK1(2)      --------->TOE2(3)--------->ARR14(2) ---------ANAC46  <---------ANAC46   --------->At4g35610         --------->ATHB12  <---------ARR14(2) ----->GLK1(2)  ------>NtERF2        <---------GLK1(1)       <<<<<<<<<TBF1         <---------AGP1 <-- -----GLK1(2)--------->At4g35610     --------->GLK1(1)<---------YAB1              <---------CCA1(2)<-   ttctgtgtttacgaatgctgccctggatttgaatttcgcatctccgattcgttcttatgcttcttcttcattagtttgatacttggatctgctcttgatc  16832700            <-----------GT1         <---------RVE1(1)        --------->ARR11(3)        <---------ARR11(3) -------->ABI4(2) ---------MYB46(3) -------->MYB55(2)                                                                                  < ->ZmHOX2a(2)                         ----------->GT1                                               - -----DEAR3(1)               <----------DOF2                                                 <------- ->ATHB12<---------CCA1(1)<---------YAB1             <----------DOF2    <---------GLK1(2) <---------ANAC58 -------MYB52(1)       <---------ATHB51        <------MYB83  --------->YAB1               <---------ANAC46 --------AtMYB61       --------->AHL20(2)      <------MYB46(1)    <---------YAB1          <---------ANAC58   ggtggtttcagatatttctcttcaaattattctttgcagatagaaaatttggtgactttagtttgataatgctagcttctgggtttgatttttcgtagtt  16832800                <---------ZAT14                                                               -------                --------->ZAT14                                                             ---------       ------>ZmHOX2a(1)                      <-------GAMYB                     ------>ZmHOX2a(2)  <-    ------>ZmHOX2a(1)                        --------->MYB111(2)              <---------ARR11(3)   <- <------ZmHOX2a(2)                           <---------MYB46(3)        <-------GAMYB  --------->YAB1 =============HOX2a_HOX2a                    <-----------RAV1(1)       <---------At4g35610 <<<<<<<<<< ---------ARR14(2)                           --------->MYB55(2)<---------ZAT2 --------->ARR11(3)<---- -------->ARR14(2)                           --------->MYB52(2)<---------At4g35610------>ZmHOX2a(1)<- --TOE1(2) <---------ZAT14            --------->TOE2(3)<----------DOF2--------->MYB52(2)   >>>>>>>>>>   tcgatcctcctagttcagttcaatggcttcaaatttgaaacctttgtttgttggactctttcttaagctggtgagttgatgatcctaataagaaaccaat  16832900                                                           --------->DAG2                                                           <---------------AtSPL3                                                         ---------->DOF2                                                      --------->ANAC58        --------->ATHB12                           <------NtERF2 -->MYB52(1)                                      ------>NtERF2 >MYB46(3)                 <-------TEIL           --------->LBD16 --------ANAC58           --------->CCA1(2)       <---------RAP2.6(3) --------ANAC46          <---------ARR14(2)      <---------ATERF1(2)                   ============== <<<<<<<LFY   <---------ANAC58                   --------->ATERF1(2)                   ============== -----ATHB12  <---------ANAC46                   --------->RAP2.6(2)               <-----------GT1 --------ANAC58          --------->ARR14(2)     <---------LBD16           ------>MYB83 ------>ZmHOX2a(1) >>>>>>>LFY   <---------ANAC58        <----------DOF2 --------->ANAC58    ------>MYB46(1)   ggtgtgtttttgatttgtgtgttttcagatacattttgtgcttctagttagccggcaaggaaaggtaaggctcaccaaatggtattctccttatgcacag  16833000  Previous    Next  AGI:  At4g35410.1    Description:  clathrin adaptor complex small chain family protein. similar to AP19 (associated protein 19), ATP binding / protein binding / protein kinase [Arabidopsis thaliana] (TAIR:AT2G17380.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79566.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Clathrin adaptor, sigma subunit/coatomer, zeta subunit; (InterPro:IPR000804); contains InterPro domain Adaptor protein complex, sigma subunit (InterPro:IPR016635); contains InterPro domain Clathrin adaptor AP1, sigma subunit; (InterPro:IPR015604) Range:  from: 16832506    to: 16834014    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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