Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                               ------             ------>ZmHOX2a(2)                                                               ------->TEIL            <------ZmHOX2a(2)                                                            ------------           <---------AGP1                                                              <---------ICU4           <---------ARR14(3)                                                          --------->YAB1           --------->ARR14(3)                                                          --------->ATHB12           <---------ARR11(3)               --------->ATHB12                          <---------ATHB12           --------->ARR11(3)               -------->ATHB1                         <---------AHL20(2)           --------->AGP1                   <---------ICU4                         --------->AHL20(2)           <---------ARR14(2)              <---------ATHB12           --------->TOE2(3)-------->ATHB1           --------->ARR14(2) <-----------HVH21             <---------GLK1(2)     <---------ATHB12   aatatgcattcaagatcttgaagatgggattgggtcactctctaaatcattgatcaaatacagagtctctattcttaacatctaataaatcattgtaccc  16752200                                    --------->MYB52(1)                                  <---------MYB52(2)                       --------->TOE2(3)      <---------------AtSPL8 --------->TOE2(3)   --------->AHL20(2) --------->ANAC55(1)   <---------AHL20(2) --------->ANAC58   --------->AHL20(1) --------->ANAC55(2) ---->ANAC46          <---------ANAC55(2) --->MYB46(3)         --------->ANAC58  --------->ANAC46                                 <----------DOF2 --->AtSPL8           --------->ANAC46--------->ZAT6                         <-----------GT1 <-------   acaaattttttgtacatatagaatacgtaaatgttaactaacacaaaactaatacaacattctttgaaacatttaagttctaccatttcttctttctttc  16752300                                                                                <---------YAB1                                                                              --------->YAB1                                                                         --------->AHL20(1)                                                                         <---------AHL20(1)                                                                         <---------AHL20(2)                                                                    --------->AHL20(2)                                                              <---------ANAC55(2)--------->ATHB12                                                            <-----------GT1  ----------->GT1     <---                                                         <---------ICU4 --------->YAB1        <------                                                <---------MYB46(3)  <---------AHL20(1)     <---------ICU4                                               <---------YAB1 --------->ANAC55(2)<---------ICU4  <---                                    <-----------GT1     --------->ICU4 <---------YAB1----------->GT1                      --------->ANAC46         <---------TOE2(3)    --------->AHL20(1)    --------->ICU4                      --------->ANAC58         <---------TOE1(3)    <---------AHL20(2)    <---------AHL20(2) ---DOF2              --------->ANAC58    <----------DOF2----------->GT1--------->AHL20(2)--------->AHL20(2)   tcaacataagaactcaaaaattccaaggaacaagaattttacaacttttatggttgcaattgttacatattttattatattgataattggaaaaaattac  16752400                                                                 <-----------HVH21                                                               <-------MYC3                                                               <-------MYC2                                                               ------->MYC2                                                               ------->MYC3           <----------DOF2                                                            <---------ANAC46         <---------ANAC58                                                            <---------ANAC58         <---------ANAC58                                                            <---------AtLEC2       <-----------GT1                                                            <---------ANAC58    ----------->GT1 <---------TOE2(3)  <---------ANAC46                    <---------ANAC58   <---------ZAT14 ------DAG2         <---------ANAC58                    <---------ANAC58   --------->ZAT18      ----- -----GT1  --------->GLK1(2)                            <---------ANAC46   <---------ZAT18      ----- -------DOF2        <---------ANAC58                <----------DOF2        --------->ZAT14      -----   tttatggtatgaaattctagtatcgtatgcttcaatgagacaatgggtttgctactttgcttgcatgtgtcaactagtggacttgttactttcgcaccaa  16752500                                                                            *TSS                                             --------->AHL20(2)        ----------------->AGL2                                             <---------AHL20(1)        <-----------------AGL1                              --------->ARR14(2)                       ------->GAMYB                            <---------YAB1   <---------AHL20(2)      -------->P                         ----------->TGA1 --------->YAB1           --------->MYB46(3)                         --------->ICU4   <--------HAHB4         <-----------GT1 ---->ANAC58      <------------CBF       <---------ATHB12      <---------AHL20(2) ---->ANAC58    <---------YAB1<---------ARR14(2)               --------->AHL20(2) ---->ANAC46    <---------AHL20(2)       <---------YAB1    --------->AHL20(2)  ----------->GT1      -   gaaacgatttgctctgttttaattgtcatgacgatttgggcctataattaattcaggcccataaattaaacaaccccaaaatggtcaaaatcaattcatc  16752600                                 ------>MYB83                                 --------->MYB52(1)                       --------->MYB46(3)                      ------>MYB46(1)                      ------>MYB83                    <---------MYB46(2)                    --------->DEAR3(1)                    <---------MYB55(2)                    --------->MYB46(3)                    <---------MYB111(1)                    <---------MYB111(2)                <---------YAB1                    --------->AtMYB61       <---------ARR14(2)                 <-----------GT1 <<<<<<<<<<<<<<<<<LFY<---------ICU4                --------->MYB46(3)        <---------MYB46(3)              ------>ZmHOX2a(1)         -           ------>ZmHOX2a(2)   <---------MYB59      <---------MYB52(1)--------->ANAC46              -           --------->YAB1   <---------ZAT18 <---------MYB52(1)      <---------ALFIN1               --       <---------YAB1 -------->P ------>MYB46(1)------>ZmHOX2a(1)   --------->ZAT6                 --       --------->ICU4--------->MYB55(1)  --------------->AtSPL3  ------>ZmHOX2a(1)                <-- -------------------->WRI1 ----------->HVH21--------->ARR14(2)------>ZmHOX2a(1)              <-------   ttcttcgtgatgatcgtaatcaccaaccagtgacctaacaatggccgttcctccattattcttcctcctcacactcctctctctcccttctcttcttatc  16752700       <---------ANAC58       <---------ANAC58      <---------MYB46(3)      --------->HSFC1(2)      --------->ABI4(2)    <---------MYB52(1)    <-------PIF5    ------->PIF5   <---------DEAR3(2)   --------->LBD16                 --------->ARR14(2)  <---------ATERF1(2)              <---------ARR14(2)  <---------DEAR3(1)             --------->LBD16  --------->DEAR3(1)            --------->LBD16                                                 -----  --------->ATERF1(2)           --------->HSFB2a(2)                                           <------ <---------------------WRI1     <---------HSFB2a(2)                                    --------->REM1(2) -------->LBD16                 --------->ANAC46 <---------LBD16                       --------->ZAT14 ----->NtERF2                  <---------HSFB2a(2)   <---------TOE2(2)                <---------MYB52(1) ------->DEAR3(1)              <---------LBD16 --------->ETT(2)                       ----------->HVH21 ------->ANAC46        ------>ZmHOX2a(1)       <---------ETT(2)                      --------->LBD16 -------LBD16      --------->ARR14(2)       ------>ZmHOX2a(1)       ------->TEIL     <-----------HVH21 --CCA1(2)         <---------ARR14(2)--------->MYB46(3)    <-----------GT1          <---------ANAC46   tccgccggtgcttccaatgcctatccttctattcccggaaccgctcctatcgacggaggtttcaccgatgaacttaaacccattcgccgtgaagtctacg  16752800                                                                                         --------->ZAT2                                                --------->O2                             <---------ZAT2                                                <---------TGA1a                          --------->At4g35610                                                <---------ANAC46                 ====================                                                --------->TGA1a                  ------>ZmHOX2a(1)                                                <---------O2                 --------->ARR14(2)                                        --------->GLK1(1)                    <---------ARR14(2)                        <---------At5g28300   <---------RAP2.6(3)          <---------MYB46(3)                       <---------WRKY38(1)    ------>NtERF2                <---------DEAR3(2)                     <-----------HVH21  <---------GLK1(1)                  <---------HSFB2a(1)                <---------bZIP60(1)     --------->At4g35610                --------->HSFC1(2)                --------->bZIP60(1)     <---------At4g35610                --------->HSFB2a(1)                --------->TGA2(1)    --------->LBD16                       <---------HSFC1(2)        --------->GLK1(2)          <---------LBD16   <---------PCF2       <---------DEAR3(1)        --------->ARR11(3)     --------->ZAT6<---------ANAC46            --------->SPL7  <---------At4g35610        <---------ARR11(3)  <---------MYB52(1)<-----------HVH21        <---------SPL7 <---------MYB52(1)  ----------->GT1   --------->WOX13(1) --------->ARR14(2)  --------->At4g35610   ==================== ---->LBD16     <---------TGA2(1)--------->ANAC46 --------->ALFIN1     ----------->HVH21--------->MYB52(2) ---LBD16    ----------->HVH21 <---------ALFIN1<------NtERF2         <---------------AtSPL3  <-------   ggaatggcaaaatctatgacatcagtcaccgttacactccggagatgccgtcgtgggactcatcggaaggaatcggacggttcctatggttagctgcgag  16752900                                                                                         --------->ANAC55(2)                                                                                     --------->YAB1                                                                              --------->TGA1a           ------>ZmHOX2a(2)                                                  <---------TGA1a          <---------GLK1(1)                                                   <---------ANAC46          --------->GLK1(1)                                                   --------->ANAC58          <------ZmHOX2a(2)                     <---------ALFIN1              <---------O2         <---------AGP1                     --------->ANAC58                  --------->ANAC58  <----         --------->ARR14(2)                 --------->ANAC46                  =======================         ------->TEIL                       --------->ANAC58                  <---------ANAC55(2)   -         --------->ARR11(3)               <---------ALFIN1                <-----------HVH21   <------         <---------ARR11(3)          <---------ARR14(2)               <---------At4g35610--------->ANAC58    --------->MYB52(1)               --------->ARR14(2)               ----------->RAV1(2)--------->ANAC58 ================HOX2a_HOX2a         --------->KAN4(2)              <-----------GT1 ----------->HVH21 =================HOX2a_HOX2a        <---------GLK1(2)           ----------------------->TaNAC69(2) < --ANAC46<---------ARR14(2)        <---------YAB1              <---------YAB1 --------->O2 <---------ICU4   tatgaagaacggatctcttgctaataactctgaaatgaagattcccacgcacactggtactcatgttgattcacctggtcacgtctatgacaagtattac  16753000      <----------DOF2     <---------ANAC46     <---------ANAC58     <---------ANAC58   ------>NtERF2 <---------ANAC58 <---------ANAC58          =================HOX2a_HOX2a        <---------AHL20(2) -----YAB1               <---------ARR11(3)       ------>ZmHOX2a(2)                                 < ================bZIP_DOF--------->ARR11(3)     --------->ARR11(3)                                <-- -------->ZAT2        <----------DOF2====================HOX2a_HOX2a                              <-- -----GT1 <---------TOE2(3)------>ZmHOX2a(2)    <---------ARR11(3)      <-----------GT1    <--------- ---------ZAT2--------->WRKY38(1)    ------>ZmHOX2a(1)      <------------------------ANAC81----------   gatgctggctttgatgttgactcgcttgatcttcaagtcctcaatggtatgatctacaaatccatttttttttttttcatttttgtattatctctcaatt  16753100  Previous    Next  AGI:  At4g35210.1    Description:  carrier. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35200.1); similar to CM0216.210.nc [Lotus japonicus] (GB:BAF98210.1); contains InterPro domain Protein of unknown function DUF241, plant (InterPro:IPR004320) Range:  from: 16751229    to: 16752244    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g35220.1    Description:  cyclase family protein. similar to cyclase family protein [Arabidopsis thaliana] (TAIR:AT4G34180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47855.1); contains InterPro domain Putative cyclase (InterPro:IPR007325) Range:  from: 16752576    to: 16754310    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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