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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ATHB12
<-------
TEIL
<------
MYB83
<---------
YAB1
<------
MYB46(1)
----------->
GT1
--------->
MYB59
--------->
At4g35610
<---------
MYB52(1)
<---------
GLK1(2)
<-----------
RAV1(2)
---------
STY1(2)
<---------
ATHB12
<---------
GLK1(2)
<---------
ICU4
------->
MYB.PH3(2)
---------->
DOF2
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
--------->
TOE2(3)
-->
DOF2
<---------
YAB1
--------->
YAB1
<-----------
GT1
<<<<<<<<<
TBF1
<---------
ATHB12
ctagttaggtttttgattcatgggc
tcattcaaaagcccattgattctccttacgaacagcttcttcttcctcaggtgtaaaatcattctcaatgttgaa
16480100
<---------
ANAC58
--------->
ZAT14
<---------
LBD16
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
ANAC46
----------->
RAV1(2)
<------
NtERF2
--------->
GLK1(1)
--------->
LBD16
--------->
HSFB2a(1)
--------->
ANAC46
----------->
GT1
--------->
ARR14(2)
--------->
ANAC58
<-----------
RAV1(1)
<---------
ARR14(2)
--------->
ANAC58
--------->
At4g35610
<---------
TOE1(3)
--------->
GLK1(2)
--------->
ARR14(2)
<-------
MYC3
<---------
TOE2(3)
------->
TEIL
<---------
ANAC58
<---------
LBD16
------->
MYC3
<----------
DOF2
---
<-----------
ARR10
<---------
ICU4
<---------
ANAC58
--------->
ANAC58
<------
<---------
ARR14(1)
--------->
YAB1
<---------
MYB52(1)
--------->
ANAC58
-------
<---------
GLK1(2)
<----------
DOF2
----------->
RAV1(1)
<------
ZmHOX2a(2)
<---------
TOE2(3)
--
agttgaacgaatctcctctggagtcttgcctttgatcatgtccgcaacagtttggcatgtgagatcaaacaagctttttatgttgaggtaattcgcagca
16480200
--------->
TGA1a
------>
ZmHOX2a(1)
<---------
TGA1a
------->
TEIL
------>
ZmHOX2a(2)
--------->
O2
<-------
TEIL
======================
HOX2a_HOX2a
<------
ZmHOX2a(2)
=======================
HOX2a_HOX2a
--------->
AGP1
<------
ZmHOX2a(2)
<---------
O2
<---------
ARR14(2)
<---------
ARR11(3)
==========
--------->
ARR14(2)
--------->
AGP1
<---------
ANAC46
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ETT(2)
<---------
HSFB2a(2)
--------->
ARR14(2)
--------->
DEAR3(1)
--------->
HSFB2a(2)
<---------
ARR14(2)
----------->
HVH21
------>
ICU4
<---------
MYB46(3)
<---------
GLK1(2)
<---------
DEAR3(1)
---
ZAT2
<---------
HSFB2a(1)
<---------
GLK1(1)
--------->
O2
-->
ZAT2
--------->
KAN4(1)
----------->
ARR10
<------
ZmHOX2a(1)
------->
YAB1
--------->
ALFIN1
--------->
ARR11(3)
<---------
ALFIN1
--------->
CCA1(2)
<---------
bZIP60(2)
aggatgagttcaaagatggtggattgttcgagatccatgaacttctcgtcccacttgttgagatcctcttcagagataggattagcctcgtcgacgtggt
16480300
<----------
DOF2
--------->
GLK1(2)
--------->
YAB1
--------->
ARR11(3)
------->
GAMYB
--------->
ANAC58
--------->
ANAC46
<------
ZmHOX2a(2)
<---------
ANAC58
--------->
ANAC58
<----
--------------->
AtSPL3
<---------
GLK1(2)
--------->
ANAC58
--------->
ARR14(2)
<---------
ANAC58
--------->
ANAC58
<-------
MYC3
--------->
At4g35610
<-------
MYC3
<---------
ANAC58
<----------
DOF2
<---------
ANAC58
--------->
ANAC46
------->
MYC3
<
=============================
bZIP_DOF
------->
MYC3
--------->
GLK1(1)
<---------
ATHB12
--------->
ANAC46
atttcttgcagtactcgatcactttcacaagaatcttgctttccacgtttgcaagagggattccatcagcaacgcaatcgtcttcaaccatatgcgctat
16480400
<---------
ZAT2
<---------
ANAC46
--------->
GLK1(1)
<---------
ANAC58
<---------
At4g35610
<---------
ANAC58
----------->
HVH21
--------->
YAB1
<---------
ANAC58
<---------
WOX13(1)
--------->
TOE2(3)
--------->
At4g35610
--------->
ARR11(3)
-----
AtMYB61
--------->
ANAC46
--------->
MYB52(1)
<------
ZmHOX2a(2)
<---------
ANAC58
---------
DEAR3(1)
<---------
ALFIN1
--------->
MYB46(3)
<---------
ARR11(3)
<---------
ANAC46
<-
ggtctgcgattggattgctaccgcttcttccacctcaaacgactgaccatcggagctcatcaacacgatcatcttcgaagacat
tgtgtgttccttgtgg
16480500
<---------
TOE2(3)
<---------
YAB1
--------->
DAG2
<---------
ARR14(2)
<---------
TOE2(3)
<-------
--------->
ANAC58
--------->
CCA1(2)
<---------
ZAT6
---------------------
<---------
At5g28300
<---------
ARR11(3)
<------------
CBF
----------->
GT1
<---
-----
ZmHOX2a(1)
--------->
ANAC58
--------->
ARR11(3)
--------->
ZAT18
<---------
TOE1(3)
<-------
aggaggtttttcactgtgaagcaaatttgatgaaagatttaagaatttagagagcgaacaaattgtgttaaggtgatgaagttgtgaaaccctatgcgtc
16480600
<---------
ATHB12
--------->
MYB46(3)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
-------
--------->
At4g35610
-------
<-----------
HVH21
-------
<------
MYB83
--------->
AtMYB61
<------
--------->
YAB1
<---------
DEAR3(2)
--------->
MYB52(1)
<-------
<---------
AHL20(2)
<------
MYB46(1)
<---------------
AGL15
------>
ZmHOX2a(1)
--------
<-----------
TBP
<---------
MYB46(3)
<----------
DOF2
--------->
TOE1(3)
<-------
--
ANAC58
<---------
DEAR3(1)
==========================================================
-->
TaNAC69(2)
<---------
DREB2C(2)
--------------->
AGL15
--------->
TOE2(3)
<---------
ANAC55(2)
-------
DOF2
<---------
STY1(2)
-------->
P
<-----------
GT1
----------->
GT1
--
ANAC58
--------->
STY1(2)
<-----------
GT1
----------->
GT1
------->
GAMYB
--------->
AHL20(2)
tttgtatttataagccctagctagagtcggtgagatcaaccattccttttttaagaaggaaatagttattttccttaaccgaagaaaataagtaaattat
16480700
<---------
At4g35610
<---------
At4g35610
----------->
GT1
--------->
At4g35610
<----------
DOF2
--------->
At4g35610
<---------
DEAR3(1)
--------->
ETT(2)
--------->
DAG2
<-------
TEIL
-->
ATHB51
---------->
DOF2
--------->
ARR14(2)
-->
ATHB12
<---------------
AGL15
<------
MYB83
-->
AHL20(2)
--------------->
AGL15
<------
MYB46(1)
---
AHL20(2)
--------->
YAB1
<-----------
RAV1(2)
<---------
YAB1
<---------
TOE1(2)
--
AHL20(2)
----------------->
AGL3
<-----------
GT1
<--------
P
------>
ZmHOX2a(1)
->
AHL20(2)
<-----------------
AG
<-----------
HVH21
<---------
REM1(1)
--------
--
AHL20(1)
<-----------------
AGL1
--------->
LBD16
<-----------
RAV1(1)
--------->
ARR14(2)
============================
MADS_MADS
<---------
LBD16
<---------
AHL20(2)
<---------
ARR14(2)
ttgtcgactccttttcataaaaggtaatttcagatgagtaaaccaaaataaaccgggtcaaattttcatttttttgttgtaggttcggctcaaatcctta
16480800
<---------
ANAC46
----------->
GT1
<---------
DEAR3(1)
--------->
SPL7
<-------
TEIL
<---------
SPL7
--------->
ARR11(1)
<---------------
AtSPL8
<---------------
AtSPL3
--------->
ZAT2
<---------
TOE2(3)
--------->
At4g35610
---------->
DOF2
--------->
DAG2
--------->
AHL20(2)
---------->
DOF2
<---------
YAB1
<---------
YAB1
--------->
ZAT14
<-----------
GT1
--------->
YAB1
--------
----------->
GT1
--------->
ZAT18
--------->
AHL20(2)
<---------
ATHB51
<-----------
GT1
->
TOE2(3)
<---------
ZAT14
----------->
GT1
<---------
ATHB12
----------->
GT1
ttttcagaaaatgtaaattcagtaaagtgaaccagctaaaccggtttaaatttacaataggcccaattataaaggtacggcgtaaaatgtaacaatttaa
16480900
<----
<-----
>>>>>>>>>
EIN3
<---------
ARR11(3)
<-----
--------->
CCA1(2)
--------->
ARR11(3)
----------
--------->
ARR11(3)
--------->
YAB1
--------->
ANAC46
---------->
DOF2
<---------
ARR11(3)
<----------
DOF2
--------->
YAB1
--------->
CCA1(2)
--------->
CCA1(2)
<---------
DAG2
<-------
TEIL
<---------
ARR11(3)
->
AHL20(2)
<-------
TEIL
<------
ZmHOX2a(1)
<---------
GLK1(2)
---------->
DOF2
--------->
ARR11(3)
gagggatatagatatacattggaatataggaaactttatccaaagataatattcagattcatttataagaaaccaaaagaagtctagtagatatagccgt
16481000
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AGI:
At4g34470.1
Description:
ASK12 (ARABIDOPSIS SKP1-LIKE 12); protein binding / ubiquitin-protein ligase. similar to ASK11 (ARABIDOPSIS SKP1-LIKE 11), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G34210.1); similar to kinetochore protein [Brassica juncea] (GB:BAB85607.1); contains InterPro domain SKP1 component, POZ; (InterPro:IPR016073); contains InterPro domain SKP1 component; (InterPro:IPR001232); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897); contains InterPro domain SKP1 component, dimerisation; (InterPro:IPR016072)
Range:
from: 16480026
to: 16480484
Orientation: Reverse
Links:
TAIR
MIPS
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