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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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              --------->ATHB12
             <-------TEIL
   <------MYB83                                                                      <---------YAB1
   <------MYB46(1)                                                      ----------->GT1
  --------->MYB59                                                     --------->At4g35610
<---------MYB52(1)                     <---------GLK1(2)            <-----------RAV1(2)
---------STY1(2)                     <---------ATHB12   <---------GLK1(2)       <---------ICU4
------->MYB.PH3(2)          ---------->DOF2   ------>ZmHOX2a(1)    ------>ZmHOX2a(1)--------->TOE2(3)
-->DOF2  <---------YAB1   --------->YAB1  <-----------GT1    <<<<<<<<<TBF1     <---------ATHB12
 
ctagttaggtttttgattcatgggctcattcaaaagcccattgattctccttacgaacagcttcttcttcctcaggtgtaaaatcattctcaatgttgaa  16480100
                    <---------ANAC58
               --------->ZAT14
             <---------LBD16                       <---------ANAC58
            ------>ZmHOX2a(1)                      <---------ANAC46
            ----------->RAV1(2)        <------NtERF2
       --------->GLK1(1)               --------->LBD16
       --------->HSFB2a(1)            --------->ANAC46                            ----------->GT1
      --------->ARR14(2)              --------->ANAC58                      <-----------RAV1(1)
      <---------ARR14(2)              --------->ANAC58    --------->At4g35610    <---------TOE1(3)
      --------->GLK1(2)            --------->ARR14(2) <-------MYC3         <---------TOE2(3)
      ------->TEIL  <---------ANAC58 <---------LBD16  ------->MYC3    <----------DOF2            ---
      <-----------ARR10         <---------ICU4     <---------ANAC58--------->ANAC58          <------
     <---------ARR14(1)      --------->YAB1   <---------MYB52(1)   --------->ANAC58          -------
     <---------GLK1(2)    <----------DOF2----------->RAV1(1)<------ZmHOX2a(2)    <---------TOE2(3)--
 
agttgaacgaatctcctctggagtcttgcctttgatcatgtccgcaacagtttggcatgtgagatcaaacaagctttttatgttgaggtaattcgcagca  16480200
                                                                                          --------->TGA1a
                                                              ------>ZmHOX2a(1)           <---------TGA1a
                                    ------->TEIL            ------>ZmHOX2a(2)             --------->O2
                              <-------TEIL                  ======================HOX2a_HOX2a
                             <------ZmHOX2a(2)             =======================HOX2a_HOX2a
                            --------->AGP1                 <------ZmHOX2a(2)              <---------O2
                            <---------ARR14(2)            <---------ARR11(3)              ==========
                            --------->ARR14(2)            --------->AGP1                  <---------ANAC46
                            <---------ARR11(3)            --------->ARR11(3)           --------->ETT(2)
                         <---------HSFB2a(2)              --------->ARR14(2)           --------->DEAR3(1)
                         --------->HSFB2a(2)              <---------ARR14(2)           ----------->HVH21
------>ICU4         <---------MYB46(3)                    <---------GLK1(2)            <---------DEAR3(1)
---ZAT2             <---------HSFB2a(1)                  <---------GLK1(1)          --------->O2
-->ZAT2             --------->KAN4(1)                   ----------->ARR10  <------ZmHOX2a(1)
------->YAB1--------->ALFIN1--------->ARR11(3) <---------ALFIN1         --------->CCA1(2) <---------bZIP60(2)
 
aggatgagttcaaagatggtggattgttcgagatccatgaacttctcgtcccacttgttgagatcctcttcagagataggattagcctcgtcgacgtggt  16480300
                                   <----------DOF2
                            --------->GLK1(2)                             --------->YAB1
                            --------->ARR11(3)                       ------->GAMYB
                         --------->ANAC58                           --------->ANAC46
              <------ZmHOX2a(2)   <---------ANAC58                  --------->ANAC58           <----
    --------------->AtSPL3 <---------GLK1(2)                        --------->ANAC58   --------->ARR14(2)
<---------ANAC58         --------->ANAC58 <-------MYC3          --------->At4g35610    <-------MYC3
<---------ANAC58  <----------DOF2 <---------ANAC58             --------->ANAC46        ------->MYC3<
=============================bZIP_DOF     ------->MYC3 --------->GLK1(1) <---------ATHB12 --------->ANAC46
 
atttcttgcagtactcgatcactttcacaagaatcttgctttccacgtttgcaagagggattccatcagcaacgcaatcgtcttcaaccatatgcgctat  16480400
                                                  <---------ZAT2                         <---------ANAC46
                                                  --------->GLK1(1)                      <---------ANAC58
                                                  <---------At4g35610                    <---------ANAC58
                                       ----------->HVH21         --------->YAB1   <---------ANAC58
          <---------WOX13(1) --------->TOE2(3)    --------->At4g35610       --------->ARR11(3)
-----AtMYB61                --------->ANAC46--------->MYB52(1)  <------ZmHOX2a(2) <---------ANAC58
---------DEAR3(1)         <---------ALFIN1--------->MYB46(3)   <---------ARR11(3) <---------ANAC46<-
 
ggtctgcgattggattgctaccgcttcttccacctcaaacgactgaccatcggagctcatcaacacgatcatcttcgaagacattgtgtgttccttgtgg  16480500
                                     <---------TOE2(3)
                          <---------YAB1                          --------->DAG2
                    <---------ARR14(2)                            <---------TOE2(3)         <-------
               --------->ANAC58  --------->CCA1(2)           <---------ZAT6    ---------------------
        <---------At5g28300     <---------ARR11(3)       <------------CBF     ----------->GT1   <---
-----ZmHOX2a(1)--------->ANAC58 --------->ARR11(3) --------->ZAT18<---------TOE1(3)         <-------
 
aggaggtttttcactgtgaagcaaatttgatgaaagatttaagaatttagagagcgaacaaattgtgttaaggtgatgaagttgtgaaaccctatgcgtc  16480600
                                   <---------ATHB12
                                   --------->MYB46(3)
                               <------ZmHOX2a(2)
                              --------->ARR11(3)
                              <---------ARR11(3)                                             -------
                             --------->At4g35610                                             -------
                         <-----------HVH21                                                   -------
                        <------MYB83--------->AtMYB61                                        <------
    --------->YAB1      <---------DEAR3(2)                              --------->MYB52(1)  <-------
    <---------AHL20(2)  <------MYB46(1)   <---------------AGL15       ------>ZmHOX2a(1)     --------
  <-----------TBP      <---------MYB46(3) <----------DOF2            --------->TOE1(3)      <-------
--ANAC58               <---------DEAR3(1) ==========================================================
-->TaNAC69(2)          <---------DREB2C(2)--------------->AGL15      --------->TOE2(3)<---------ANAC55(2)
-------DOF2    <---------STY1(2)  -------->P                      <-----------GT1     ----------->GT1
--ANAC58       --------->STY1(2) <-----------GT1           ----------->GT1 ------->GAMYB--------->AHL20(2)
 
tttgtatttataagccctagctagagtcggtgagatcaaccattccttttttaagaaggaaatagttattttccttaaccgaagaaaataagtaaattat  16480700
                            <---------At4g35610                                    <---------At4g35610
                  ----------->GT1                                                  --------->At4g35610
       <----------DOF2      --------->At4g35610                                  <---------DEAR3(1)
--------->ETT(2) --------->DAG2                                                 <-------TEIL
-->ATHB51      ---------->DOF2                                                 --------->ARR14(2)
-->ATHB12  <---------------AGL15                                             <------MYB83
-->AHL20(2)--------------->AGL15                                             <------MYB46(1)
---AHL20(2)--------->YAB1 <-----------RAV1(2)                <---------YAB1 <---------TOE1(2)
--AHL20(2)----------------->AGL3                            <-----------GT1<--------P        ------>ZmHOX2a(1)
->AHL20(2)<-----------------AG                      <-----------HVH21    <---------REM1(1)  --------
--AHL20(1)<-----------------AGL1                  --------->LBD16     <-----------RAV1(1)--------->ARR14(2)
============================MADS_MADS           <---------LBD16   <---------AHL20(2)     <---------ARR14(2)
 
ttgtcgactccttttcataaaaggtaatttcagatgagtaaaccaaaataaaccgggtcaaattttcatttttttgttgtaggttcggctcaaatcctta  16480800
                                                                            <---------ANAC46
                                                                            ----------->GT1
                                                                         <---------DEAR3(1)
                                                                        --------->SPL7
                                                                        <-------TEIL
                                                                      <---------SPL7
                                                                      --------->ARR11(1)
                                                                    <---------------AtSPL8
                                                                    <---------------AtSPL3
                              --------->ZAT2                        <---------TOE2(3)
                              --------->At4g35610                 ---------->DOF2
                    --------->DAG2                             --------->AHL20(2)
                   ---------->DOF2                <---------YAB1 <---------YAB1
                   --------->ZAT14              <-----------GT1--------->YAB1               --------
       ----------->GT1  --------->ZAT18   --------->AHL20(2)  <---------ATHB51        <-----------GT1
->TOE2(3)          <---------ZAT14    ----------->GT1         <---------ATHB12     ----------->GT1
 
ttttcagaaaatgtaaattcagtaaagtgaaccagctaaaccggtttaaatttacaataggcccaattataaaggtacggcgtaaaatgtaacaatttaa  16480900
                                                                                               <----
                                                                                              <-----
            >>>>>>>>>EIN3                <---------ARR11(3)                                   <-----
        --------->CCA1(2)                --------->ARR11(3)                               ----------
       --------->ARR11(3)               --------->YAB1         --------->ANAC46         ---------->DOF2
       <---------ARR11(3)     <----------DOF2              --------->YAB1              --------->CCA1(2)
  --------->CCA1(2)           <---------DAG2          <-------TEIL                    <---------ARR11(3)
->AHL20(2) <-------TEIL  <------ZmHOX2a(1)          <---------GLK1(2)  ---------->DOF2--------->ARR11(3)
 
gagggatatagatatacattggaatataggaaactttatccaaagataatattcagattcatttataagaaaccaaaagaagtctagtagatatagccgt  16481000
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AGI:  At4g34470.1   
Description:  ASK12 (ARABIDOPSIS SKP1-LIKE 12); protein binding / ubiquitin-protein ligase. similar to ASK11 (ARABIDOPSIS SKP1-LIKE 11), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G34210.1); similar to kinetochore protein [Brassica juncea] (GB:BAB85607.1); contains InterPro domain SKP1 component, POZ; (InterPro:IPR016073); contains InterPro domain SKP1 component; (InterPro:IPR001232); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897); contains InterPro domain SKP1 component, dimerisation; (InterPro:IPR016072)
Range:  from: 16480026    to: 16480484    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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