Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ---------->DOF2                            <---------YAB1                           <---------AHL20(1)                           <---------AHL20(2)                                    <---------AHL20(2)                         <---------YAB1                        <---------YAB1    --------->AHL20(2)                       --------->YAB1                      <---------DAG2   <---------TOE2(3)                       <--------HAHB4                     --------->TOE2(3)<---------AHL20(2)       -                       <---------ICU4            --------->ARR11(3)        --------->YAB1       -----                       --------->ATHB51          --------->AHL20(1)      <---------YAB1         <----        ---------->DOF2-------->ATHB1            <---------ARR11(3)   <---------YAB1       <---------AHL20(2)     --------->TOE2(3)--------->ICU4             <---------AHL20(1)  --------->TOE2(3)     --------->AHL20(2) ------->bZIP60(1)    <---------YAB1         <---------ZAT6<----------DOF2 --------->AHL20(2)  ------ --------bZIP60(1)    <---------ATHB51   <---------YAB1<-----------GT1--------->ICU4 --------->YAB1 -   gtcatcacattaaagtcaaaaacaattattatttttaaagaatattagtgatatattttacctttatgaaacattattaatatttaaacataaaaaatta  16378600          <---------ANAC46                                                                         <-       ----------->HVH21                                                                        <----     <---------YAB1                                                                             -----   --------->YAB1                                                                           <-------- --------->ARR11(3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                --------- <---------ARR11(3)                    --------->ATHB12   <---------ANAC46              --------->AHL20(2) -------->CCA1(1)        --------->MYB52(1)           <---------HSFB2a(2)              <---------AHL20(2) ---->AHL20(2)           <---------ARR14(2)      <-------TEIL        ----------->GT1   <---------AHL20(1) -----AHL20(2)           --------->ARR14(2) <------ZmHOX2a(1)       <---------WOX13(1) --------->AHL20(1) --->AHL20(2)     ---------->DOF2    <---------WOX13(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  ----- -------->RVE1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->HSFB2a(2)        ----------->GT1<----   aaatatcatgagacgggaagtatagcagaacgggtttggattgataggaaatacatcgagacgggtttggattgatataacacaggtaaaatatttattt  16378700                                                                                                    <                                                                                                    -                                                                                                  ---                                                                                                <----                                                                                              -------                                                                                             <-------                                                                                           <---------YAB1        <---------ICU4                                                                   -------->ATHB1        --------->YAB1                                                                   <---------ICU4       <---------YAB1                                                                    --------->YAB1      <-----------GT1                                                                   --------->ICU4    <---------AHL20(2) --------->AHL20(2)                 <---------YAB1           <---------AHL20(2) <---------AHL20(2)    <---------AHL20(2)             <----------DOF2             --------->AHL20(2)- --------YAB1      <---------AHL20(2)         <---------AHL20(2)              <---------AHL20(2)----- -----AHL20(2)     --------->AHL20(2)         --------->AHL20(2)             --------->AHL20(2) ----- ---->AHL20(1)    --------->AHL20(2)      <---------AHL20(2)              --------->YAB1--------->AHL20(2) -AHL20(2) --------->ZAT6                --------->AHL20(2)<-----------GT1--------->AHL20(2)--------- >AHL20(2)<---------YAB1   <-----------GT1--------->AHL20(2)          <---------AHL20(2)--------->AHL20(1) ---->AHL20(2)    <---------AHL20(2) <---------YAB1<-----------GT1    --------->AHL20(2)<---------AHL20(2) -----AHL20(1)    <---------AHL20(1)--------->AHL20(2)<---------DAG2 --------->AHL20(2) <---------YAB1   tattattttatcatcactaatttttttaattacaagattaatataaaattatataactttattactaaatataaaattataaaatttaaaattattatat  16378800        <---------AHL20(1)        --------->AHL20(1)        <---------AHL20(2)     --------->AHL20(2)        <<<<<<<<CAMTA3     <---------AHL20(2)       <-------MYC3     --------->AHL20(1)       ------->MYC3 ---------AHL20(2)           --------->ANAC58               ------>MYB83 ---------->TBP              --------->ANAC58               ------>MYB46(1) -------->TBP                --------->ANAC46 <-----------RAV1(1) --------->STY1(2) -----AHL20(2)             <---------ALFIN1  --------->ARR11(3)   <---------STY1(2)      --------->ANAC58 ---->TBP              --------->ZAT14    --------->YAB1 --------->DEAR3(2)              --------->ANAC58 --AHL20(2)            <---------ZAT14   <---------YAB1<-----------GT1                  <------------ -------->AHL20(2)     <---------ZAT18  <---------AHL20(2)--------->MYB46(3)        ---------->DOF2 ------>TBP            --------->ZAT18  --------->AHL20(2)--------->DEAR3(1) ----------->TBP ---->AHL20(2)        <---------ZAT6    --------->AHL20(1)--------->DREB2C(2)<---------YAB1 >AHL20(2)         <---------MYB52(1)  --------->YAB1<-----------HVH21       --------->AHL20(2)   atataaataaaatatttgtccgtagtgtaccacgcgttgaattataatatgttgttgtcaccgactctagctagggcttataaatacaaagacgcatagg  16378900                                                                                                    -                                                                                                   --                     ------------>CBF                             <---------ANAC58                 --               --------->TOE2(3)                       --------->YAB1                              --               <---------DAG2                    --------->ARR11(3)                         ---------               --------->TOE1(3)                 <---------ARR11(3)      --------->At5g28300--------- <-----------GT1    --------->ZAT6          --------->TOE2(3)--------->ARR14(2)             --------- -----------TaNAC69(2)        <---------ZAT18   <---------CCA1(2) <---------ANAC58    ------>ZmHOX2a(1)   gtttcacaacttcatcaccttaacacaatttgttcgctctctaaattcttaaatctttcatcaaatttgcttcacagtgaaaaacctcctccacaaggaa  16379000     <---------ARR11(3) ----------->CBF                        <-----------HVH21 ------->ANAC46                <---------At4g35610                                              ----- ------->ANAC58                --------->At4g35610                                              <---- ------->ANAC58                --------->ZAT2        <---------ANAC46                         <------ >ANAC58            ------>ZmHOX2a(2)  <---------MYB46(3)                             --------->AtMYB61 >ANAC46          --------->ARR11(3) <---------MYB52(1)--------->ALFIN1           --------->DEAR3(1) >ANAC58        <---------YAB1 <---------GLK1(1)    <---------TOE2(3)  --------->WOX13(1)  <---------ANAC46   cacacaatgtcttcgaagatgatcgtgttgatgagctccgatggtcagtcgtttgaggtggaagaagcggtagcaatccaatcgcagaccatagcgcata  16379100                                                                                              -------                                                                                              <------                                                                                            <--------                                                                                           --------->bZIP60(2)                                                                                           <---------TGA1a                                                                                           --------->O2                                                              =======================================bZIP_DOF                  <---------ANAC46                      <---------ANAC58                   <---------O2                 <---------At4g35610                    <---------ANAC58                   --------->TGA1a              <-------GAMYB                           --------->GLK1(2)                    --------->ANAC46             <---------ANAC58                  --------->ANAC58                  --------->ANAC58       <---------YAB1                          --------->ANAC58                  --------->ANAC46 -->MYC3     <---------ANAC58            ------->MYC3<---------GLK1(2)------>ZmHOX2a(2)  <---------ALFIN1 ---MYC3--------->ATHB12  <---------GLK1(1)  ---------->DOF2  ---------->DOF2    --------->ANAC58<--- ---ARR14(2) <---------ANAC46            <-------MYC3<---------ARR11(3)<---------------AtSPL3 <------   tggttgaagacgattgcgttgctgatggaatccctcttgcaaacgtggaaagcaagattcttgtgaaagtgatcgagtactgcaagaaacaccacgtcga  16379200                         ------>ZmHOX2a(2)                        --------->GLK1(1)                        <------ZmHOX2a(2)                       <---------AGP1                        <---------KAN4(1)                       --------->ARR14(2)                    --------->HSFB2a(1)                       --------->GLK1(2)                --------->HSFB2a(2)                       <---------ARR14(2)               <---------HSFB2a(2)                       <-----------ARR10               ------>ZmHOX2a(2)         <---------CCA1(2)      ----------->RAV1(2)  --------->ARR14(2)         ======================HOX2a_HOX2a           <---------AGP1 -->DEAR3(1)           --------->ARR11(3)            <---------ARR14(2)                             - ---DEAR3(1)           <---------ARR11(3)            ------->TEIL    <---------ALFIN1   --------->ZAT2 ---HVH21------>ZmHOX2a(1)    --------->MYB46(3)     <---------ARR11(3)                 <---------ZAT2 ------O2=======================HOX2a_HOX2a          --------->ARR11(3)             <---------ICU4  - ---ETT(2)            <------ZmHOX2a(1)        <-------TEIL  --------->MYB46(3)    <---------YAB1<---   cgaggctaatcctatctctgaagaggatctcaacaactgggacgagaagttcatggatctcgaacaatccaccatctttgaactcatccttgctgcgaat  16379300                                                                            --------->GLK1(2)                                                                            --------->ARR14(1)                              --------->ANAC58                             --------->ARR14(2)                             <-------MYC3           <---------YAB1         <---------ARR14(2)                        ------>ZmHOX2a(2)    ------>NtERF2                 <---------GLK1(2)                   <---------WOX13(1)       --------->LBD16               <---------GLK1(1)                  <---------ANAC46         <---------ANAC58               <---------HSFB2a(1)              <---------ANAC58--------->ANAC46   --------->ICU4          ----------->ARR10          ---------->DOF2    ------->MYC3  <---------ANAC46         --------->LBD16      --------->TOE2(3)<---------At4g35610 <---------ANAC58        <-----------RAV1(2)   ----------->RAV1(1)<---------ARR11(3)  <---------LBD16    --------->ANAC58 -------->TOE1(3) <---------ANAC58    <-----------RAV1(1)    --------->ANAC58<-------TEIL -------->TOE2(3) <---------ANAC58 --------->MYB52(1) ---------->DOF2   <------ZmHOX2a(1)        <--- --------GT1  <---------ANAC58--------->ANAC58<---------ARR14(2)  <---------ZAT14               -----   tacctcaacataaaaagcttgcttgatctcacatgccaaactgttgcggacatgatcaaaggcaagactccagaggagattcgttcaactttcaacattg  16379400                                                                                            <--------           ----------->RAV1(2)                                                             <---------       <-----------GT1                                                        --------->TOE2(3)   <--  --------->ATHB12       --------->GLK1(2)  --------->ATHB12                  --------->TOE1(3) ----- --------->ICU4      >>>>>>>>>TBF1        --------->GLK1(2)             --------->YAB1  <----------DOF2 ------TOE2(3)   <------ZmHOX2a(1)    <------ZmHOX2a(1)<---------YAB1 ------->TEIL--------->STY1(2) ---->YAB1 <---------At4g35610       ----------->GT1<----------DOF2<---------ATHB12<------------MYB.PH3(2)   agaatgattttacacctgaggaagaagaagctgttcgtaaggagaatcaatgggcttttgaatgagcccatgaatcaaaaccctaactagctttcttttt  16379500  Previous    Next  AGI:  At4g34210.1    Description:  ASK11 (ARABIDOPSIS SKP1-LIKE 11); ubiquitin-protein ligase. similar to ASK12 (ARABIDOPSIS SKP1-LIKE 12), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G34470.1); similar to kinetochore protein [Brassica juncea] (GB:BAB85607.1); contains InterPro domain SKP1 component, POZ; (InterPro:IPR016073); contains InterPro domain SKP1 component; (InterPro:IPR001232); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897); contains InterPro domain SKP1 component, dimerisation; (InterPro:IPR016072) Range:  from: 16379007    to: 16379465    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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