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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                               -----
                                                  <-------MYC3                             <--------
                ------>MYB46(1)                  --------->ANAC46                          <--------
                ------>MYB83                 <------ZmHOX2a(2)                             <--------
       --------->WRKY38(1)                   --------->CCA1(2)                           --------->DEAR3(2)
       --------->WRKY45                     --------->ARR11(3)                           --------->ATERF1(1)
       --------->WRKY12 <---------ALFIN1    --------->AGP1                         --------->TOE2(3)
     <-------GAMYB  --------->ANAC58        --------->ARR14(2)                 <---------MYB111(1)
 <------NtERF2<---------MYB59               <---------ARR14(2)                 --------->MYB46(3)
<---------DEAR3(2)  --------->ANAC46       --------->At4g35610                 <---------MYB111(2)
---------DEAR3(1)   --------->ANAC58 <---------ALFIN1                          <---------MYB55(2)
-----NtERF2  --------->MYB46(3)     <---------ZAT14                           ------>MYB46(1)  <----
------->ATERF1(1)--------->MYB46(3) --------->ZAT14                           ------>MYB83--------->DEAR3(1)
-------SPL7 --------->ANAC58        <---------ZAT18       <------ZmHOX2a(2) --------->AtMYB61 <-----
---------HVH21------->GAMYB      --------->At4g35610     <---------ARR14(2)--------->MYB46(3) <-----
--->NtERF2  --------->ANAC58  <-----------HVH21<---------ALFIN1           ------>NtERF2 <---------At4g35610
----->DEAR3(1)--------->AtMYB61 <---------DEAR3(1)------->MYC3  <---------ALFIN1------->GAMYB-------
 
cgtcggagcgttgacaaccaaacacccaaactccgtcgctgcactcagatccacgttgtcgatcccaacaccagcgcgaccaacaaccttgagccgtccg  16376200
                                                                              <---------At4g35610
                                                                   =======================HOX2a_HOX2a
                                                                  ========================HOX2a_HOX2a
                                                                  ============================HOX2a_HOX2a
                                                                 --------->ARR14(3)
                         --------->TOE1(3)                       <---------ARR14(3)
                         --------->TOE2(3)                       --------->AGP1
                       -------->P                                <---------ARR11(3)
   <---------ARR14(2)  ------>MYB46(1)               ----------->HVH21        --------->At4g35610
   --------->ARR14(2)  ------>MYB83                  <------NtERF2<------ZmHOX2a(2)
---->LBD16       --------->ANAC58            <------ZmHOX2a(2)   --------->ARR11(3)
-SPL7            --------->ANAC58      ===================================HOX2a_HOX2a
---HVH21       --------->MYB52(1)      ------>ZmHOX2a(1)         --------->ARR14(2)
-RAP2.6(3)    ----------->HVH21        =============HOX2a_HOX2a  <---------ARR14(2)------>ZmHOX2a(1)
-------HVH21 --------->AtMYB61         ==================================HOX2a_HOX2a   <------ZmHOX2a(1)
----ANAC58  --------->ANAC46       <---------ALFIN1 <-----------HVH21  <---------TOE2(3)     -------
----ANAC58  --------->bZIP60(2)    --------->ANAC46<---------ANAC58------>ZmHOX2a(2)<-----------RAV1(2)
-->SPL7   <---------ALFIN1       <---------ALFIN1  <---------ANAC58===========================HOX2a_HOX2a
 
tgagacgattcgaacacctcacggccaaccttagtcccactcctcacgatcaaggcgtcacagagcgagatcttaatgttgagctcctcaggagtcatgt  16376300
                                                                                     ------>ZmHOX2a(2)
                                                                                     <-------TEIL
                                                                 --------->O2        ===============
                                                             ------>NtERF2 <---------TOE2(2)
                                                            --------->ANAC46        ================
                                                            --------->ANAC58        <------ZmHOX2a(2)
                                                            --------->ANAC58       --------->AGP1
                                                           <---------LBD16 <---------TOE1(2)
                                                      <---------GLK1(2)  ----------------------->TaNAC69(2)
                                              ----------->HVH21  <---------O2      <---------ARR14(2)
                 --------->ANAC46--------->TOE1(3)   <---------ZAT2   --------->GLK1(2)
        <---------ETT(2)         --------->TOE2(3)--------->DEAR3(1) <---------GLK1(2)             <
    --------->MYB46(3)       ---------->DOF2 <-----------TGA1--------->LBD16       --------->ARR14(2)
---->GT1--------->ETT(2) ------>ZmHOX2a(1)   <-----------HVH21  ------>NtERF2    ----------->ARR10 -
 
tatacgaacagtcgacattcgcgacatcctccaaaagcttaataccagcgtcaccgagcttctccgccacgagaatcgtaggcttagatccgtctccagt  16376400
                    --------->ATERF1(1)                                                         <---
    --------->ARR14(2)--------->At4g35610                                            <---------HSFB2a(2)
   <------ZmHOX2a(1)<------NtERF2                  ---------->DOF2                   --------->HSFB2a(2)
  --------->ANAC58 <---------ATERF1(1)    --------->ANAC46                          ------>ZmHOX2a(2)
  --------->ANAC58 <-----------HVH21    <---------ALFIN1           <---------ANAC46 ================
  --------->ANAC46<---------DEAR3(1)<---------ANAC46 --------->ANAC58              <------ZmHOX2a(2)
==========HOX2a_HOX2a <---------At4g35610<---------LBD16   --------->LBD16         =================
==========HOX2a_HOX2a<---------DEAR3(1)<---------WRKY12  <---------LBD16          <---------ARR14(2)
---------ZAT14    <---------ANAC58  <---------ANAC58 --------->ANAC58             --------->ARR14(2)
-------->ZAT14    <---------ANAC58  <---------ANAC58--------->GLK1(1)           ----------->ARR10
 
actgcaggaaacgagaacgaggcgtcgctgaagagtattgcgtccacgggaagggaaagccacggagatggctgatggaaggggcgatctggaagacaga  16376500
                                                     --------->At4g35610
                                                     <---------At4g35610
                                                     <------NtERF2
                                                    ------>NtERF2
                                                   --------->ALFIN1
                                                  --------->ATERF1(1)
                                                  <-------GAMYB
                                                  <------NtERF2
                                                 <---------DEAR4(2)
                                                 <---------DEAR3(2)
                                                 <---------MYB46(3)
                                                 <---------ATERF1(1)
                                                <---------AtMYB61
                                                <---------ANAC46
                                                --------->ALFIN1
                                                <---------DEAR3(1)
                                               <------NtERF2
                                               <---------ABI4(1)
                                              <---------ERF1
                                              <---------RAP2.3(1)
                                              <---------DEAR4(2)
                                              <---------RRTF1(1)
                                              <---------RAP2.6(1)
                                              ------>NtERF2
                                              <---------ATERF1(1)
                                              <---------ORA47(2)
                                             --------->DEAR3(1)
                                             <---------RRTF1(2)
                                             --------->ATERF1(2)
                                             --------->ALFIN1
                                             <---------RRTF1(3)
                                             <---------RAP2.3(3)
                                             <---------RAP2.6(2)
                                             <---------RAP2.3(2)
                                             <---------DEAR3(1)
                                             <---------ATERF1(2)
                                             <---------ANAC46
                                            <------NtERF2
                                            --------->ATERF1(1)
                                            <---------ABI4(1)
                                            --------->RAP2.3(1)
                                            --------->DEAR4(2)
                                            <---------At4g35610
                                            --------->At4g35610
                                            --------->DREB2C(1)
                                           ------>NtERF2
                                           <---------DEAR4(2)
                                           <---------ATERF1(1)
                                           <---------ERF1
                                           <---------RAP2.6(1)
                                           <---------RRTF1(1)
                                           <---------ORA47(2)
                                           <---------RAP2.3(1)
                                          <---------RRTF1(3)
                                          <---------RRTF1(2)
                                          <---------RAP2.3(3)
                                          <---------DREB2C(2)
                                          --------->ALFIN1
                                          <---------RAP2.6(2)
                                          <---------DEAR3(1)
                <------MYB46(1)           <---------RAP2.3(2)
                <------MYB83              <---------ATERF1(2)
                <---------MYB46(3)        --------->ATERF1(2)
               --------->MYB111(2)       <---------ABI4(1)
               --------->MYB55(2)        <------NtERF2<---------ANAC46
               <---------MYB46(3)        --------->ATERF1(1)
               --------->MYB111(1)      <---------ATERF1(1)
               --------->ALFIN1        --------->ALFIN1
      --------->LBD16                  <---------DEAR3(1)
      ------>ZmHOX2a(1)               --------->ATERF1(1)
      ===============================HOX2a_HOX2a<---------DREB2C(2)
     --------->TOE1(2)              --------->ALFIN1<---------MYB46(3)        <---------ZAT6
=================================MYC_MYB<---------RAP2.3(1)                   --------->ALFIN1
<---------TGA1a<---------AtMYB61<---------HSFB2a(2)<---------DEAR3(1)       <---------ANAC58
--------->ANAC55(2)   --------->MYB52(1)<---------DEAR4(2)                  <---------ANAC46
<---------ANAC55(2) <------NtERF2  <------ZmHOX2a(1)--------->MYB55(2)<---------DAG2
--------HVH21 <--------P      ===============HOX2a_HOX2a              <----------DOF2           ----
=============HOX2a_HOX2a      <------ZmHOX2a(2)--------->ATERF1(1)<-----------------AGL2   <--------
=============HOX2a_HOX2a ------->GAMYB<------ZmHOX2a(1)----------->HVH21    <---------ANAC58  ------
 
gtcacgttcctgagagagttggtggcaacggcgatcgaggaggaggcggcggcggtggctgacattgctaccgcttttggagtgtgagtgaattgagtag  16376600
                  ----------->GT1
                 <------NtERF2
                --------->LBD16                                        <------MYB46(1)
               <---------ANAC58                                        <------MYB83
               <---------ANAC46                                        <---------ANAC46
               <---------ANAC58                                        <---------ANAC58
              --------->ATERF1(1)                <-----------TBP       <---------ANAC58
              <---------LBD16                 ----------->GT1         <---------MYB46(3)
              <------NtERF2                ---------->DOF2            --------->MYB111(1)
          <------MYB46(1)              <------ZmHOX2a(2)              <---------AtMYB61
          <------MYB83                 --------->CCA1(2)              --------->MYB46(2)
          <---------MYB46(3)          >>>>>>>>>GATA-1         ---------->CDC5
      <-----------RAV1(1)             --------->ARR11(3)      <-----------RAV1(2)
     <---------YAB1                   <---------ARR11(3)   <---------At4g35610
  <---------AHL20(1)                  >>>>>>>>>GATA-2      --------->At4g35610
  --------->AHL20(1)                  >>>>>>>>>GATA-4      <------NtERF2        <---------YAB1
  --------->ARR11(3)     *TSS         --------->AGP1      <---------DEAR3(2)  <---------bZIP60(1)
------->GT1 <---------DEAR3(1)        >>>>>>>>>GATA-3    <---------ZAT18 <---------ANAC46    <------
-ANAC46   --------->MYB52(2)         --------->GLK1(1)   <---------RAP2.3(3)  --------->bZIP60(1)
----->GT1<---------AtMYB61--------->ZAT6------>ZmHOX2a(2)<---------DEAR3(1)   <---------ANAC46
 
agaaaaatattgttggtggcggagttataacacgagggagagatctaaaaggttttatagtcggctcaggggtttggtgtgatgtgatagtattttgacg  16376700
                               <-------MYC3
                              <---------ANAC46
                              <---------ANAC58          ------>ZmHOX2a(2)
                              <---------TGA1a          <---------At4g35610
                            <---------ANAC46           --------->At4g35610
                        <---------ANAC58              <---------ARR11(3)
               --------->ANAC58<-------MYC2           --------->ARR11(3)
               --------->ANAC58------->MYC2  <------MYB83                                      <----
               --------->ANAC46------->MYC3 --------->MYB59                                    -----
             --------->ANAC58 <---------ANAC58       <---------ZAT14                          <-----
      <---------GLK1(1) <---------ANAC58  <---------MYB52(1)                   <---------GLK1(2)----
---TOE2(3)   --------->ANAC58 --------->TGA1a<------MYB46(1)         <---------ANAC46<---------AtLEC2
 
aaggtgatgaaatctcacgcgcatttggctcgcgcgtgtgattcagtttggtttagtgatctgcaaaatgtttcggcgaatagaatttgcatagtttacc  16376800
                                                                       <---------ARR11(3)
                                                                       --------->ARR11(3)
                                                                      <---------CCA1(2)
                                                  ----------->GT1   --------->ANAC55(2)
                                                 --------->DAG2     <---------ANAC55(2)
                       --------->AHL20(2)       ---------->DOF2   <-----------GT1
                      --------->AHL20(2)    <---------TOE2(3)  <---------ICU4 ----------->HVH21
-----HSFB2a(2)------>MYB83  --------->AHL20(2)<------ZmHOX2a(1)<---------AHL20(2)
---->HSFB2a(2)------>MYB46(1)  --------------->AtSPL8         --------->AHL20(2)
----LBD16    ----------->RAV1(1)        <----------DOF2       <---------AHL20(2)          ----------
----->LBD16--------->MYB46(3)  <---------------AtSPL8    <----------DOF2      --------->WRKY12
 
ggaaaaattgccaaaccaacaaaaaataaaaaaaaatgtacaactttgaggaaaagtaaactttatttattacatatctctctgaccgagaacaaaagat  16376900
                                                =====================================HOX2a_HOX2a
                                                ------>ZmHOX2a(2)
                                               <------ZmHOX2a(2)
                                              --------->ARR11(3)
                        --------->ARR11(3)    <---------ARR14(2)
                        <---------GLK1(2)     --------->ARR14(3)
                 <----------DOF2              <---------ARR11(3)
            <---------At5g28300               --------->ARR14(2)              ======================
           <-----------GT1                    --------->AGP1            <---------ANAC58
       <---------AHL20(2)                     <---------ARR14(3)        <---------ANAC58
       --------->AHL20(2)          --------->AtLEC2        --------->TOE2(3)  <------ZmHOX2a(1)   <-
>DOF2 <---------AHL20(2)<---------ARR11(3)   <---------GLK1(1)    <---------YAB1              <-----
 
tactcgaaaattatttacagctttgaagatttttgacaatgcaaatagagatcttgaagaagccttattttgatggcatgaggagtctcacgatgtctgt  16377000
         --------->ATHB12
        <------ZmHOX2a(2)
        <---------YAB1                     <-----------GT1
       --------->ARR11(3)                 <-----------GT1
       <---------ARR11(3)             <---------ARR11(3)                                           -
    --------->YAB1                ---------->DOF2                                         <---------TOE2(3)
===============HOX2a_HOX2a <---------ARR11(3) --------->TOE2(3)                         <---------AHL20(2)
--------At4g35610          --------->GLK1(2)<---------TOE2(3)                          <---------AHL20(2)
------HVH21      --------->AHL20(2)   --------->ARR11(3)       ---------->DOF2--------->ICU4      <-
 
cagataatcagatcattgacttaaatacagtatctataaaagattttaacatttatgtcccaaatgaaaagaagacttgtaatgtttttttttaatgtag  16377100
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AGI:  At4g34200.1   
Description:  EDA9 (embryo sac development arrest 9); NAD binding / amino acid binding / binding / catalytic/ cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor / phosphoglycerate dehydrogenase. similar to PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE), phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G17745.1); similar to D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative [Arabidopsis thaliana] (TAIR:AT3G19480.1); similar to H0212B02.14 [Oryza sativa (indica cultivar-group)] (GB:CAH68268.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47860.1); similar to unknown [Populus tric
Range:  from: 16373823    to: 16376626    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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