Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->YAB1                                                                              <---------ANAC58                                                                           <----------DOF2                                                                          <---------DAG2                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                     <---------ALFIN1                                                                 <-----------TGA1                                                                 <-----------HVH21                                                                --------->TGA2(1)                                                                --------->TGA1a                                                                <---------O2  <---------ANAC58                           --------->ANAC58                     <---------TGA2(1)                           --------->ANAC58                     ======================bZIP_DOF                           --------->ANAC46                     --------->bZIP60(2)                        <---------ARR14(2)                      <---------bZIP60(1)                        --------->ARR14(2)                      --------->bZIP60(1)                <---------AHL20(2)                              --------->O2  --------->ANAC55(2)                --------->AHL20(2)                              <---------ANAC55(2)               <---------AHL20(2)                               <---------ANAC58               <---------AHL20(1)                               --------->ANAC58 --------->AHL20(2) <---------AHL20(2)                          --------->ANAC55(2) ---------YAB1 --------->AHL20(2)          --------->ARR14(2)   --------->ANAC46 ------DOF2<---------AHL20(2)              <---------ARR14(2)   <---------ANAC58 ->ID1     --------->AHL20(2)  ------>NtERF2                    --------->ANAC58 --GT1<-------TEIL --------->AHL20(2)  <-------TEIL          <---------MYB52(1)   ttattatatacatttaaattatttaatatacgccaactacatacatatccagtgtaatttctcgttacgtcacacccctttcgtaatcgtctaatttcag  16310400                                   <---------AHL20(2)                                  --------->AHL20(2)                               --------->YAB1                               <---------ICU4                    <---------ANAC55(2)                                          ----------->GT1              --------->AHL20(2)--------->TOE2(3)                             --------->MYB52(1)           ----------->GT1     <--------HAHB4                              <------NtERF2          ----------->GT1     <---------YAB1                               --------->At4g35610       --------->LBD16        <---------ATHB12                  --------------->AGL15   --------->ARR11(3)         --------->ICU4                   <-----------------AGL3  --------->RVE1(1) --------->ANAC55(2)                        <-----------------AGL1   --------->ZAT14  --------->CCA1(1)<-------TEIL--------->ATHB12     --------->ANAC46       <---------At4g35610   aaaaatatccagaggtttaaatacatattcccatcattaaatctagacataaacacatcatactcacaaaatttggcagcaaacagttactacagaccca  16310500                                                                              ------>NtERF2                                                                             --------->DEAR3(1)                                                                            <----------CDC5                                                                            <------NtERF2                                                                           --------->LBD16                                                                           ------>NtERF2                                                                          <---------ALFIN1                                                                          --------->DEAR3(1)                                                                    <---------WOX13(1)                                                       <------MYB83<---------ANAC58                                                       <------MYB46(1)    --------->ANAC46                                              ----------->RAV1(2)  <---------ANAC58               <-----------GT1          <---------ALFIN1          --------->ATHB12         ------>NtERF2            <---------ARR14(2)         --------->MYB46(3)        <---------AHL20(2)       --------->ANAC46            --------->ARR14(2)    --------->ANAC46    --------->MYB59    <---------LBD16  --------->ANAC58         <---------ANAC55(2)      --------->ANAC55(2) <---------AtMYB61  --------->ATERF1(1)         --------->ANAC55(2)    <-----------GT1 --------->LBD16  <---------YAB1           --------->ANAC58   taaatgaaaaaacgtattcacttgttttcaattttcacataaccacttccctgagtttggtctcaatttgattgccccgccgaggcattactacgccaag  16310600                                                                                   --------->LBD16                                                         <---------ANAC58          <---------SPL7                                                         <---------ANAC55(1)       ----------->HVH21                                                         --------->ANAC55(2)      --------->TOE1(1)                                                         <---------ANAC58        <---------LBD16                                                         <---------ANAC46       ------->GAMYB                                                         <---------ANAC55(2)  ------>MYB83                                                 ------>MYB83                 -------->P                                                 ------>MYB46(1)              ------>MYB46(1)                                                --------->ORA47(1)           --------->MYB55(1)                                               --------->MYB46(3)           --------->DEAR3(1)                                               --------->DREB2C(2)          <---------MYB111(1)                               ------>MYB46(1) ------->GAMYB                <---------MYB46(2)                               ------>MYB83   --------->MYB46(3)            --------->MYB46(3)                             --------->MYB46(3)--------->DEAR3(1)           <---------ALFIN1        <                            --------->TCP15(2)--------->DEAR3(2)            <---------MYB55(2)      -                           --------->PCF2  --------->MYB46(3)               <---------MYB111(2) <----                           <---------TCP15(1) --------->SPL7                --------->AtMYB61  <-----                     --------->MYB52(1)    --------->DEAR3(1)              --------->MYB46(3) <------        --------->PCF2     <---------TCP20<---------At4g35610            <-----------GT1 <---------MYB52(1)     <---------TOE2(3)    <---------PCF2  --------->At4g35610    <------ZmHOX2a(1)--------->LBD16 ---   tgcgattaaggtcccatacagtgtaacgggacccactataagacagcgaccgaccaattgcgtgttaggagagtttcaccaaccccggaccggtttttac  16310700                 --------->ANAC58                 --------->ANAC58         <---------ARR14(2)                                        --------->ALFIN1    <-----------GT1                                              <---------TGA1a    --------->MYB52(1)                         ----------->TBP   <---------O2 --------->CCA1(2)                             --------->AHL20(2)--------->TGA1a ---------ARR14(2)  ------->TEIL             ==============================bZIP_DOF -------->ARR14(2)  --------->MYB52(1)       <----------DOF2     --------->O2 -----LBD16 <---------------AtSPL3           <---------------AGL15------->MYC3 ----At5g28300  --------->SPL7               --------------->AGL15<-------MYC3   --------->ANAC58 -----GT1--------->ARR14(2)     --------->ARR11(3)          --------->ANAC58     --------->ANAC58 ------>LBD16 <---------MYB52(1)<---------ARR11(3)          --------->ANAC58    *TSS   cggatataacagaaccggtacgaaccggtctcattatcttccatcttctttatatagacctcatgccatgtgtgtgactcaccaagaaaaacacaatcgt  16310800                                                                 --------->ANAC46                                                              ------->GAMYB                                                           ----------->RAV1(1)                    <--                                                          --------->MYB46(3)                     <---                                                     ------>NtERF2  --------->MYB52(1)           ----             <----------ID1                        --------->ATERF1(1)                         ------      --------->ANAC58                             <------NtERF2 --------->ANAC58        <---------ATHB12      --------->ANAC58                            ------>NtERF2  --------->ANAC58      --------->MYB52(1)      --------->ANAC46           ---------->DOF2  <---------ATERF1(1)                 --------->AtMYB61   ttaatctcacccaagaagacaaaaacacagagagagaaagagagagaaatggcgacgacaacaacagaagcaacgaagacatcatcgaccaatggagaag  16310900                --------->HSFB2a(1)                <---------HSFB2a(1)                <---------HSFC1(2)                --------->HSFC1(2)               <-----------ARR10               --------->ARR14(2) --------->At4g35610                                                      --------->ARR14(2) ----ZmHOX2a(2)<---------ARR14(2)           <---------GLK1(2)        -------->P<---------MYB52(1) ------ARR11(3)--------->GLK1(2)    <-----------HVH21            ------>ZmHOX2a(2) ----->ARR11(3)<---------ARR11(3)  <------MYB83                <---------ARR11(3) ----->ARR10  <---------GLK1(2)    <------MYB46(1)             --------->ARR11(3)   atcagaagcagtctcagaatcttcgacatcaagaagttggtcacaagagtctcttacagagcgatgatctctaccaggtctgtttttttgttttactcaa  16311000                                        --------->YAB1                                        --------->AHL20(2)                                  --------->TOE2(3)                            --------->YAB1                                     <---------ARR14(2)                            >>>>>>>>>RAP2.2                                    ------->TEIL                            --------->TOE2(3)                                  --------->ARR14(2) ---      <---------DAG2     --------->WOX13(1)            ----------->GT1        <---------CCA1(2)------      <----------DOF2  <---------At4g35610  --------->AHL20(2)     <----------ARF1 ------>ZmHOX2a(1)<   aaactctgcttttcaattcaatttcagcaatctaaatctcaattaaaaaaatcaacacagtatatactggagacaagtgtgtatcctagagaaccagaat  16311100                                                             <---------REM1(1)                                                        --------->ZAT2                                                        <---------ZAT2                                                        ----------->RAV1(2)                                                        <---------At4g35610                         -          <---------LBD16                               --------->At4g35610                         -          <-----------RAV1(2)      --------->ANAC46   <-----------RAV1(2)                         <--       <---------GLK1(1)        <-------TEIL        <-----------HVH21                             --- ------>WOX13(1)       --------->At4g35610 <---------ICU4  --------->At4g35610                  ----- --->GLK1(2)           <---------------------WRI1<---------ALFIN1 <------ZmHOX2a(1)<---------ANAC58 < ---------ATHB12  ----------->HVH21--------->AtLEC2--------->bZIP60(2)             <---------ANAC58 -   caatgaaggaactcagggaagtgacagcaaaacatccatggaacataatgaccacatcagctgatgaaggacagttcttaaacatgcttatcaagctcgt  16311200                                                      --------->DEAR3(1)                                                     <------NtERF2                                                     --------->MYB46(3) -------->ANAC46              --------->ZAT6        ------>NtERF2                      <---------ATHB12 -------->ANAC58            <<<<<<<<<<<<<<<<<LFY   --------->DEAR3(1)                --------->WOX13(1) -------DOF5.7(2)    ------>ZmHOX2a(2)             <---------ALFIN1              ----------->GT1 ------->DOF2       <------ZmHOX2a(2)           --------->ANAC46               ---------->DOF2 ---->DOF5.7(2)    <---------ARR14(2)           --------->ANAC58             <------NtERF2XXXXXXXXXXX ----------ID1     --------->ARR14(2)           --------->ANAC58           <----------ID1--------->WOX13(1) -------->ANAC58  <---------GLK1(1)----------------------->TaNAC69(2)     --------->RAP2.6(3)   taacgccaagaacacaatggagatcggagtttacactggctactctcttctcgccaccgctcttgctctccctgaagacggcaaagtaaatcaatctctt  16311300  Previous    Next  AGI:  At4g34050.1    Description:  caffeoyl-CoA 3-O-methyltransferase, putative. Identical to Probable caffeoyl-CoA O-methyltransferase At4g34050 [Arabidopsis Thaliana] (GB:O49499;GB:Q8L989); similar to caffeoyl-CoA 3-O-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT4G26220.1); similar to caffeoyl-CoA 3-O-methyltransferase [Brassica rapa subsp. pekinensis] (GB:ABE41833.1); contains InterPro domain O-methyltransferase, family 3; (InterPro:IPR002935) Range:  from: 16310780    to: 16312221    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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