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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                 --------->At5g28300
                                                                ----------->GT1
                                                             --------->MYB52(1)
                                                          --------->ANAC58             --------->At5g28300
                               ------>ZmHOX2a(1)          --------->ANAC58             --------->LBD16
                            <------ZmHOX2a(2)             --------->ANAC46      <---------ZAT2
                           --------->ARR14(2)         --------->ANAC46          --------->At4g35610
        --------->ANAC58   <---------ARR11(3)       ----------->RAV1(1)         <---------At4g35610
        --------->ANAC46   <---------ARR14(2)       <---------ALFIN1          <---------ALFIN1
        --------->ANAC58   --------->ARR11(3)   --------->At4g35610         ----------->RAV1(1)    <
     --------->At4g35610  <------ZmHOX2a(1)<---------GLK1(2) ----------->RAV1(1)--------->ZAT2     -
--->CCA1(2)--------->WOX13(1)------>ZmHOX2a(2)  <---------At4g35610       --------->At4g35610 ------
 
agaacatcagcaagcaatctggtccctgaggatccttcaacctctagcttctgctccacagaagcaacagtaacatcagcaccagctcgccgtaaaacat  16300500
      --------->MYB52(1)        <---------ARR14(2)
     --------->ANAC46           --------->ARR14(2)
   --------->ZAT6              <---------CCA1(2)     ------>MYB83                          ---------
 --------->MYB52(1)        --------->SPL7            ------>MYB46(1)                      --------->ZAT14
------->GAMYB            <-----------HVH21    --------->ANAC46                            <---------ZAT14
---------MYB52(2)       --------->DEAR3(1)    --------->ANAC58                --------->YAB1
-------->MYB46(3)     ------>ZmHOX2a(1)       --------->ANAC58                --------->TOE2(3)
--->TOE2(3)<---------GLK1(2)   --------->GLK1(1) ------->TEIL      <---------MYB52(1)     <---------REM1(2)
 
caactaacacaacagcttctatttcctccgtcccatatccaattggaacaagcacctacatagtttctcagttatctccaatctcaatctctctacacaa  16300600
                                                                         ----------->RAV1(1)
                                                                     --------->ANAC58
                                                                     --------->ANAC58
                                                                     --------->DEAR3(1)
                                                                     --------->ANAC46
                                                                    --------->SPL7
                                                                   <---------ATERF1(1)
                                                                  --------->ANAC46
                                                                  ----------->HVH21
                                                                 --------->MYB46(3)
                                                                 --------->DEAR3(2)
                                                               --------->ARR14(2)
                                   <----------ID1          --------->At4g35610
                                   ----------->GT1       --------->HSFB2a(2)                    ----
                                 --------->DAG2          <---------HSFB2a(2)                  <-----
                                ---------->DOF2     --------->MYB111(1)  ------>NtERF2  <---------ANAC58
--------->ZAT2             --------->ANAC58         <---------MYB46(3)------>NtERF2     <---------ANAC58
<---------ZAT2             ----------->GT1  <----------DOF2<---------At4g35610    --------->GLK1(2)
>ANAC46                    --------->ANAC58--------->TOE2(3)   <---------ARR14(2)<---------GLK1(2)
 
acaagctggacaattttagttatagataacaagaaaaaaggagaaacctttttagtagttgcagaagacccgacgccaacatcggaatctagcgttgtta  16300700
                             <---------TOE2(3)
                 --------->AGP1
                 <---------ARR14(2)
                 --------->ARR14(2)
                 <-----------ARR10
                 --------->ARR11(3)
    --------->LBD16         ---------->DOF2
   --------->ANAC46      <----------DOF2
  <---------LBD16<---------ARR11(3)  --------->PCF2                                                -
<---------ARR14(2) ------>ZmHOX2a(2)<-----------HVH21                 <---------ZAT14             --
--------->ARR14(2)--------->CCA1(2)<------MYB46(1)                    --------->ZAT14       <------ZmHOX2a(1)
------------->AGL1<------ZmHOX2a(2)<------MYB83               >>>>>>>>>TBF1             --------->TOE1(2)
------GT1        <---------AGP1   --------->MYB59          <-----------------------TaNAC69(2)   ----
 
ccatacccggagacatggaagatctaagctttaaagttcggtccctccttgttgtccctagtgaagaagaaactacagagactgaagaaaaactaggagc  16300800
                                                                                  --------->ARR14(2)
                                                                                  <---------ARR14(2)
                                                                                 --------->KAN4(1)
                                                                                 <---------KAN4(1)
                                                                    --------->YAB1<---------ARR11(3)
                                                                    --------->ATHB12   ---------->DOF2
                                                                    -------->ATHB1--------->ARR11(3)
                                    <---------WRKY18(1)            <---------ATHB12   ------>ZmHOX2a(1)
                            --------->CCA1(2)<XXXXXXXXXXXXXXXXXXXXMIR397A        --------->GLK1(1)
              --------->ANAC58--------->ANAC58            <---------------------WRI1 --------->TOE2(3)
------>GAMYB  --------->ANAC58--------->ANAC58            <---------At4g35610   <---------KAN4(2)
------->MYB46(3)          --------->CCA1(2)  ---------->DOF2       <---------YAB1<---------GLK1(1) >
------->RAV1(1) --------->MYB46(3) --------->WRKY38(1)    --------->At4g35610   ---------->TaMYB80--
 
aacagtcatcgagacacaacccatcgaagagataagccttgactccatcaaagttggactcagcgaagctatcattgaaatcgaatatcctaaagacccc  16300900
                                 --------->DEAR3(1)
                                 --------->RAP2.3(2)
                                <------NtERF2
                                --------->RAP2.3(1)   <---------ANAC58
                               --------->LBD16        --------->ANAC55(2)
                               ------>NtERF2          <---------ANAC58
                              --------->ANAC46        <---------ANAC46
                      --------->YAB1                  <---------ANAC55(1)
 <---------YAB1--------->At4g35610                --------->At4g35610                   ----------->GT1
<---------TOE2(3)    <---------YAB1       *TSS    <---------At4g35610          --------->HSFB2a(2)
>>>>>>>>WRKY18 --------->ZAT2<---------LBD16      <-------GAMYB                <---------HSFB2a(2) <
------->WRKY12 <---------At4g35610------>NtERF2  --------->MYB52(2)   --------->ZAT14---------->DOF2
 
attgacgatagctaatgcagcagtctgataatcccgccgctagacggagagtgagttgcgtcttatctactagtatacacttcttgaagaaagctaaaaa  16301000
                         <---------WOX13(1)
                        <------------CBF
                       --------->ATHB12
                     <---------WOX13(1)
                    <---------ANAC46                                                <----------DOF2
         <---------MYB52(1)    ---------->DOF2                                     <---------ANAC58
    <---------CCA1(2)<----------DOF2         <-----------GT1                     <-----------GT1
   <---------SPL7   <---------ANAC58      --------->AHL20(2)                <---------AHL20(2)
 <------NtERF2  <------------CBF--------->DAG2   ------>ZmHOX2a(1) ----------->GT1 <---------ANAC58
---------DEAR3(1)   <---------ANAC58 ------------>CBF <---------DAG2  <-----------GT1            <--
 
cgtcgtcgtatcgttgtcttattgcttgattggataaagcttcaattttttcctccaatttttgtcgaaaatgtaacattttttttgctttccactgtga  16301100
           --------->GLK1(2)
          <---------GLK1(2)                                                          ------>ZmHOX2a(1)
          --------->ARR14(2)                                                       *TSS
        --------->ANAC58                                    <---------YAB1     <-----------ARR10
        --------->ANAC58                           <---------AHL20(2)         <---------CCA1(2)
      --------->ANAC46                             --------->AHL20(2)      <---------At4g35610
    <---------ALFIN1      <----------ID1          --------->YAB1      <---------ANAC58        <-----
<-----------HVH21     --------->CCA1(2)          ----------->TBP      --------------------->WRI1  <<
----------CBF    ---------->DOF2------->TEIL     <---------------AGL15<---------ANAC58 <----------DOF2
 
gattgtcacacacgattctctaaagaaatgagacgaattttgaaaacgatttataaaaatagtatttttgtttccttgagcttatctcctcttttctctt  16301200
                      <---------ATHB12
                     --------->ANAC58
      --------->CCA1(2)
     <---------ARR11(3)            --------->YAB1--------->AHL20(2)                          -------
     --------->ARR11(3)         --------->WOX13(1)                                           -------
-----DOF2            --------->ANAC58  --------->ZAT14                         <---------HSFB2a(2)
<<<<<<<<MYB80       --------->WOX13(1) <---------ZAT14     <----------DOF2     --------->HSFB2a(2)
 
tggtttgagatatgaattacagacaatcaagtagtcagtcacaacagtgtgtataaatatgtcttttaagtgaaatcggtttcgagagacagtgagacga  16301300
                                                                              --------->ARR14(2)
                                                                             =======================
                                                                      ----------->HVH21
                                                                      <---------ETT(1)
                                                                     --------->DEAR3(2)
                                                                     ===============HOX2a_HOX2a
                                                                     ===============================
                                                                     ------>ZmHOX2a(2)
                                                                    <------ZmHOX2a(2)
                                                                    ================HOX2a_HOX2a
                                                                   --------->ARR14(2)
                                                                   <---------ARR14(2)
                                                                   <-----------ARR10
                                                                  <------NtERF2                    <
                                          --------->At4g35610     --------->ATERF1(1)              -
                                         --------->ARR11(3)      <---------MYB46(3) --------->GLK1(2)
       --------->ARR11(3)                <---------ARR11(3)     <---------ANAC58   --------->ARR14(2)
      <------ZmHOX2a(1)              ---------->DOF2            <---------ANAC46   <---------GLK1(2)
    <---------TOE2(3)          <---------ZAT2                   <---------ANAC58   <---------ARR14(2)
    <---------TOE1(3)          --------->At4g35610             <---------LBD16<---------ARR14(2)<---
-->ANAC58                      <---------At4g35610             <XXXXXXXXXXXXXXXXXXXXMIR842     -----
-->ANAC58   <---------LBD16    --------->ZAT2           <<<<<<<<<<<<<<<<<LFY <------ZmHOX2a(1) <----
 
aaatgttaaggattttggggagaagagttgtttcagcttcgaaagagcttactagtattcaacaatggcggatccgaccaggaaccgattctcgtcccga  16301400
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AGI:  At4g34020.1   
Description:  DJ-1 family protein. similar to DJ-1 family protein [Arabidopsis thaliana] (TAIR:AT1G53280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47821.1); contains InterPro domain DJ-1 (InterPro:IPR006287); contains InterPro domain ThiJ/PfpI (InterPro:IPR002818)
Range:  from: 16298267    to: 16300943    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g34030.1   
Description:  MCCB (3-METHYLCROTONYL-COA CARBOXYLASE); biotin carboxylase. Identical to Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor (MCCB) [Arabidopsis Thaliana] (GB:Q9LDD8;GB:O49501;GB:Q94F35); similar to putative methylcrotonyl-CoA carboxylase beta chain, mitochondrial precursor [Oryza sativa (japonica cultivar-group)] (GB:BAC99804.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64992.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47822.1); contains InterPro domain Acetyl-coenzyme A carboxyltransferase, C-terminal; (InterPro:IPR011763); contains InterPro domain Acetyl-coenzyme A carboxyltransferase, N-
Range:  from: 16301184    to: 16304104    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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