Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<-------
GAMYB
<---------
MYB52(1)
<---------
YAB1
--------->
YAB1
<---------
YAB1
--------
ZAT14
<------
MYB83
<-------
TEIL
------->
ZAT14
----------->
GT1
--------->
YAB1
------->
ZAT18
<------
MYB46(1)
---------->
DOF2
<---------
YAB1
--------
ZAT18
<---------
MYB46(3)
----------->
GT1
<------
ZmHOX2a(1)
<-
gtggactattatcagttggttaacaaaattcgttgaaaatagaaagacttac
atgagggaaattgaaaagaggagaactagcagtatcatcaagaagtga
16211000
------>
ZmHOX2a(1)
--------->
TOE2(3)
<---------
HSFB2a(1)
--------->
HSFC1(2)
--------->
HSFB2a(1)
--------->
GLK1(2)
--------->
YAB1
--------->
ARR14(2)
------>
MYB46(1)
<---------
ARR14(2)
------>
MYB83
<-----------
ARR10
----------->
RAV1(1)
<---------
GLK1(2)
<----------
DOF2
--------->
AtMYB61
--------->
ANAC46
<---------
ICU4
<---------
ANAC58
<---------
REM1(2)
<---
--------->
YAB1
<----------
DOF2
<---------
ANAC58
<-----------
GT1
<---------
HSFC1(2)
<---
------
TEIL
<---------
GLK1(2)
<---------
ANAC46
<-----------
GT1
<---------
ARR11(3)
<---
gttcattttctcataatctcttcttttcttttctctcttgcattgtttcttgagaccaacaatatttatcttcttcacagaatcttcctcagaaatattc
16211100
<---------
ICU4
--------->
ATHB12
<---------
ATHB12
--------->
ICU4
<---------
YAB1
<---------
HSFC1(2)
--------->
HSFC1(2)
<---------
ICU4
<-----------
RAV1(2)
-------->
ATHB1
------->
TEIL
<<<<<<
------
ANAC46
--------->
At4g35610
------>
ZmHOX2a(1)
--------->
MYB59
<---------
ANAC58
------
ANAC58
<---------
At4g35610
<<<<<<<<<
TBF1
--------->
ANAC46
<---------
ATHB12
<--
------
ANAC58
--------->
GLK1(2)
<<<<<<<<<
TBF1
------->
TEIL
--------->
PCF2
<---------
ANAC58
cttggaccagaagaagcatctgaaatcattgacaaatcgtcttcttcttcttcctcttcttgatgcacataattttggtcccatgaatctttgcttcttc
16211200
<--------
--------->
ANAC46
<---------
ARR14(2)
--------->
ARR14(2)
<-----------
HVH21
--------->
ANAC58
--------->
At4g35610
--------->
ANAC58
<---------
At4g35610
------>
ZmHOX2a(1)
<--
<<<
TBF1
<---------
ICU4
--------->
LBD16
-------
At4g35610
<------
ZmHOX2a(1)
----------->
RAV1(2)
----
ttctgctgtcaaacccattgctgtctctaaaacaagaaggacttggtgaagaaacagactggtctaaatacagagtccatcctgactcgcatccgctact
16211300
<------
<---------
YAB1
--------
<---------
ARR11(3)
<---------
--------->
ARR11(3)
---------->
DOF2
--------->
AHL20(1)
---------->
DOF2
----------->
RAV1(1)
--------->
CCA1(2)
<---------
AHL20(2)
-
MYB52(1)
<---------
ARR11(3)
--------->
CCA1(2)
-------
WRKY18(1)
--------->
ARR11(3)
<---------
ARR11(3)
------->
HVH21
<----------
DOF2
---------->
DOF2
<------
ZmHOX2a(2)
--------->
ARR11(3)
------
tgaccccaacat
ttcttcttttatgttttataagaaaagatatatattcttattgagatcgaacagctatgttgagaaagatttaaagaaagactgtggg
16211400
--------->
ANAC46
------->
TEIL
<-------
TEIL
--------->
ANAC58
--------->
ANAC58
---
---
MYB46(3)
------->
MYC2
<--
->
ALFIN1
<----------
DOF2
<-------
MYC2
<------------
CBF
--
RAV1(1)
--------->
TOE2(2)
<-------
MYC3
<---------
AHL20(2)
----->
GT1
*
TSS
<---------
TOE1(2)
<---------
ICU4
------->
MYC3
<----------
DOF2
<---
tgaaaaatcgactt
aaaacctatgttctttctctctatctaatatttatactaacacatgcatctatacccctctttctctatttcattgtttaagttat
16211500
<---------
DAG2
<---------------
AGL15
--------------->
AGL15
----------->
GT1
================================
MADS_MADS
--------->
YAB1
<-----------------
AGL2
<---------
LBD16
<---------
YAB1
------------>
CBF
--------->
SPL7
--------->
YAB1
<-------
<-----------
GT1
<-------
TEIL
<---------
YAB1
--------
------>
AHL20(2)
<---------------
AtSPL8
<-----------
GT1
--------->
At4g35610
-------
AHL20(2)
--------------->
AGL15
<-----------
GT1
<---------
At4g35610
------
AHL20(2)
<---------------
AGL15
<---------
AHL20(2)
------>
ZmHOX2a(1)
<------
ttatttcaatttttggttttatcttcaataggtacggagtataaacttattttaacttattatcatcgactcatcgctcctacttcttctgcctattaat
16211600
<------
ZmHOX2a(2)
--------->
CCA1(2)
<---------
ARR11(3)
<---------
ARR14(2)
<---------
AHL20(2)
--------->
AGP1
<--------
ATHB1
--------->
ARR14(2)
--------->
ATHB51
--------->
ARR11(3)
--------->
AHL20(2)
--------->
HSFB2a(2)
<---------
ATHB51
--------->
AHL20(1)
--------->
ICU4
<---------
AHL20(1)
--------->
YAB1
<---------
AHL20(2)
<------
MYB46(1)
--------->
AHL20(2)
<------
MYB83
--------->
AHL20(2)
------>
ZmHOX2a(2)
<---------
TOE2(3)
--------->
ANAC58
<-----------
ARR10
<----------
DOF2
<---------
ATHB12
<---------
MYB52(1)
--------->
ANAC58
<---------
AGP1
--
AHL20(2)
<---------
AtMYB61
--------->
ICU4
--------->
AHL20(2)
<---------
HSFB2a(2)
->
AHL20(2)
<--------
P
<---------
ICU4
---------->
ID1
<---------
AHL20(2)
<-----------
GT1
---
AHL20(2)
--------->
MYB59
<----------
DOF2
--------->
AHL20(2)
<---------
ICU4
--------->
MYB52(1)
tttcaaactttaggttggtctaataatttgggcttttgttttgtcgttattagggcaaattaatatgaacgaaataaatttttacagaagatctaatgga
16211700
--------->
ANAC58
<---------
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
<---------
ZAT18
--------->
AHL20(2)
------------
<------
NtERF2
<---------
ALFIN1
<---------
AtLEC2
--------->
ZAT14
---------->
ID1
<---------
ORA47(2)
<----------
DOF2
--------->
ZAT18
<----------
DOF2
<---------
DEAR3(1)
<---------
At4g35610
<---------
ZAT18
---------->
DOF2
------
<---------
RAP2.3(3)
---------->
DOF2
----------->
RAV1(1)
--------->
YAB1
<----------
DOF2
taagtcggcgttcttaggcacactcacttaagcggtctttgcaagtctgcaacatgtgaactcgatttaaattgcataataaagtctttttcttttttgg
16211800
<-------
GAMYB
<------
MYB46(1)
------->
TEIL
<---------
ANAC58
<-----------
ARR10
<---------
ANAC58
<---------
ARR11(1)
----------------->
AGL1
--------->
ARR14(2)
---------->
ID1
<---------
ARR14(1)
<-----------
RAV1(1)
----------->
HVH21
<---------
ARR14(2)
<---------
ARR11(3)
<------
MYB83
--------->
TOE2(2)
<---------
CCA1(2)
--->
AGL15
--------->
ARR11(3)
<---------
MYB46(3)
--------->
TOE1(2)
<-------
TEIL
----->
GT1
<---------
CCA1(2)
<--------
P
----------->
GT1
--------->
AtLEC2
ttaaaattccatatatctatcttgttgccttgttggttaactcttgtcttacaatgccagtttgtaacatgggaatgacatgcagcgttcgtatctaggc
16211900
Previous
Next
AGI:
At4g33800.1
Description:
similar to hypothetical protein [Vitis vinifera] (GB:CAN66218.1)
Range:
from: 16210012
to: 16211414
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version