AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
              <-------GAMYB
           <---------MYB52(1)
       <---------YAB1
     --------->YAB1
    <---------YAB1
--------ZAT14<------MYB83<-------TEIL
------->ZAT14----------->GT1                                                       --------->YAB1
------->ZAT18<------MYB46(1)                                  ---------->DOF2     <---------YAB1
--------ZAT18<---------MYB46(3)                     ----------->GT1 <------ZmHOX2a(1)             <-
 
gtggactattatcagttggttaacaaaattcgttgaaaatagaaagacttacatgagggaaattgaaaagaggagaactagcagtatcatcaagaagtga  16211000
                                                                                    ------>ZmHOX2a(1)
                                                                                   --------->TOE2(3)
                                                                              <---------HSFB2a(1)
                                                                              --------->HSFC1(2)
                                                                              --------->HSFB2a(1)
                                                                             --------->GLK1(2)
                                                        --------->YAB1       --------->ARR14(2)
                                                      ------>MYB46(1)        <---------ARR14(2)
                                                      ------>MYB83           <-----------ARR10
                                                     ----------->RAV1(1)    <---------GLK1(2)
                   <----------DOF2                  --------->AtMYB61    --------->ANAC46
          <---------ICU4                    <---------ANAC58          <---------REM1(2)         <---
       --------->YAB1   <----------DOF2     <---------ANAC58   <-----------GT1<---------HSFC1(2)<---
------TEIL<---------GLK1(2)                 <---------ANAC46  <-----------GT1<---------ARR11(3) <---
 
gttcattttctcataatctcttcttttcttttctctcttgcattgtttcttgagaccaacaatatttatcttcttcacagaatcttcctcagaaatattc  16211100
                      <---------ICU4
                      --------->ATHB12
                     <---------ATHB12
                     --------->ICU4
                     <---------YAB1
           <---------HSFC1(2)
           --------->HSFC1(2)                                                       <---------ICU4
   <-----------RAV1(2)-------->ATHB1                                              ------->TEIL<<<<<<
------ANAC46  --------->At4g35610                 ------>ZmHOX2a(1)    --------->MYB59   <---------ANAC58
------ANAC58  <---------At4g35610           <<<<<<<<<TBF1      --------->ANAC46<---------ATHB12  <--
------ANAC58 --------->GLK1(2)           <<<<<<<<<TBF1        ------->TEIL--------->PCF2 <---------ANAC58
 
cttggaccagaagaagcatctgaaatcattgacaaatcgtcttcttcttcttcctcttcttgatgcacataattttggtcccatgaatctttgcttcttc  16211200
                                                                                           <--------
                                                                                         --------->ANAC46
                                                                                      <---------ARR14(2)
                                                                                      --------->ARR14(2)
   <-----------HVH21                                                               --------->ANAC58
--------->At4g35610                                                                --------->ANAC58
<---------At4g35610                                                           ------>ZmHOX2a(1)  <--
<<<TBF1                                                                     <---------ICU4--------->LBD16
-------At4g35610                   <------ZmHOX2a(1)                        ----------->RAV1(2) ----
 
ttctgctgtcaaacccattgctgtctctaaaacaagaaggacttggtgaagaaacagactggtctaaatacagagtccatcctgactcgcatccgctact  16211300
                                                                                             <------
                                             <---------YAB1                                 --------
                                       <---------ARR11(3)                                 <---------
                                       --------->ARR11(3)                           ---------->DOF2
                                       --------->AHL20(1)                       ---------->DOF2
   ----------->RAV1(1)              --------->CCA1(2)                          <---------AHL20(2)
-MYB52(1)                          <---------ARR11(3)                        --------->CCA1(2)
-------WRKY18(1)                   --------->ARR11(3)                       <---------ARR11(3)
------->HVH21 <----------DOF2  ---------->DOF2        <------ZmHOX2a(2)     --------->ARR11(3)------
 
tgaccccaacatttcttcttttatgttttataagaaaagatatatattcttattgagatcgaacagctatgttgagaaagatttaaagaaagactgtggg  16211400
                                                                --------->ANAC46
                                                         ------->TEIL
                                                       <-------TEIL
                                                      --------->ANAC58
                                                      --------->ANAC58                           ---
---MYB46(3)                                          ------->MYC2                                <--
->ALFIN1               <----------DOF2               <-------MYC2                 <------------CBF
--RAV1(1)      --------->TOE2(2)                     <-------MYC3               <---------AHL20(2)
----->GT1    *TSS<---------TOE1(2)     <---------ICU4------->MYC3     <----------DOF2           <---
 
tgaaaaatcgacttaaaacctatgttctttctctctatctaatatttatactaacacatgcatctatacccctctttctctatttcattgtttaagttat  16211500
     <---------DAG2
   <---------------AGL15
   --------------->AGL15         ----------->GT1
   ================================MADS_MADS               --------->YAB1
  <-----------------AGL2     <---------LBD16              <---------YAB1
 ------------>CBF            --------->SPL7             --------->YAB1                      <-------
<-----------GT1              <-------TEIL              <---------YAB1                       --------
------>AHL20(2)          <---------------AtSPL8  <-----------GT1                   --------->At4g35610
-------AHL20(2)    --------------->AGL15        <-----------GT1                    <---------At4g35610
------AHL20(2)     <---------------AGL15       <---------AHL20(2)           ------>ZmHOX2a(1)<------
 
ttatttcaatttttggttttatcttcaataggtacggagtataaacttattttaacttattatcatcgactcatcgctcctacttcttctgcctattaat  16211600
                                                                                       <------ZmHOX2a(2)
                                                                                       --------->CCA1(2)
                                                                                      <---------ARR11(3)
                                                                                      <---------ARR14(2)
                    <---------AHL20(2)                                                --------->AGP1
                    <--------ATHB1                                                    --------->ARR14(2)
                    --------->ATHB51                                                  --------->ARR11(3)
                    --------->AHL20(2)                                          --------->HSFB2a(2)
                   <---------ATHB51                                    --------->AHL20(1)
                   --------->ICU4                                      <---------AHL20(1)
                 --------->YAB1                                        <---------AHL20(2)
            <------MYB46(1)                                            --------->AHL20(2)
            <------MYB83                                              --------->AHL20(2)------>ZmHOX2a(2)
       <---------TOE2(3)                                         --------->ANAC58     <-----------ARR10
    <----------DOF2<---------ATHB12       <---------MYB52(1)     --------->ANAC58     <---------AGP1
--AHL20(2) <---------AtMYB61              --------->ICU4--------->AHL20(2)      <---------HSFB2a(2)
->AHL20(2)<--------P<---------ICU4     ---------->ID1   <---------AHL20(2)    <-----------GT1
---AHL20(2)--------->MYB59   <----------DOF2           --------->AHL20(2)  <---------ICU4 --------->MYB52(1)
 
tttcaaactttaggttggtctaataatttgggcttttgttttgtcgttattagggcaaattaatatgaacgaaataaatttttacagaagatctaatgga  16211700
                  --------->ANAC58                              <---------AHL20(2)
                  --------->ANAC58                             <---------AHL20(2)
               <---------ZAT18                                 --------->AHL20(2)       ------------
   <------NtERF2<---------ALFIN1     <---------AtLEC2--------->ZAT14                  ---------->ID1
  <---------ORA47(2)             <----------DOF2     --------->ZAT18              <----------DOF2
 <---------DEAR3(1)        <---------At4g35610       <---------ZAT18        ---------->DOF2   ------
 <---------RAP2.3(3)    ---------->DOF2       ----------->RAV1(1)        --------->YAB1 <----------DOF2
 
taagtcggcgttcttaggcacactcacttaagcggtctttgcaagtctgcaacatgtgaactcgatttaaattgcataataaagtctttttcttttttgg  16211800
                               <-------GAMYB
                              <------MYB46(1)                                           ------->TEIL
                        <---------ANAC58                                                <-----------ARR10
                        <---------ANAC58                                                <---------ARR11(1)
                       ----------------->AGL1                                           --------->ARR14(2)
                    ---------->ID1                                                     <---------ARR14(1)
                  <-----------RAV1(1)                                  ----------->HVH21<---------ARR14(2)
          <---------ARR11(3)  <------MYB83                      --------->TOE2(2)      <---------CCA1(2)
--->AGL15 --------->ARR11(3)  <---------MYB46(3)                --------->TOE1(2)   <-------TEIL
----->GT1<---------CCA1(2)  <--------P                    ----------->GT1   --------->AtLEC2
 
ttaaaattccatatatctatcttgttgccttgttggttaactcttgtcttacaatgccagtttgtaacatgggaatgacatgcagcgttcgtatctaggc  16211900
<- Previous    Next ->

AGI:  At4g33800.1   
Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN66218.1)
Range:  from: 16210012    to: 16211414    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version