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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                             --------->ANAC58
                         <---------ALFIN1
                         --------->AtMYB61                                           --------->ZAT14
                   --------->ANAC46                                              <---------ICU4
                   --------->ANAC58                                              --------->ATHB12
                   --------->ANAC58                                             <---------YAB1
              --------->ZAT2 --------->ANAC58                   <---------LBD16 --------->ICU4
              <---------At4g35610                      <---------At4g35610    --------->YAB1
         <------ZmHOX2a(2) <---------ALFIN1        --------->ANAC58   <---------ANAC58
        --------->ARR11(3)<---------ZAT18          --------->ANAC58   <---------ANAC58
        <---------ARR11(3)--------->ZAT14          --------->ANAC46  <---------At4g35610           -
--->AtMYB61   --------->At4g35610   ----------->HVH21  --------->At4g35610   <-------TEIL     <-----
>ANAC46------->GAMYB   -------->P  <-----------HVH21  ------->TEIL   --------->ZAT2  <---------ZAT14
 
tcacttacaacgatctaagctcacgctaccacactcactgtgacccaagactcaacgcatctcagtctctggagcttgcattcatcattgcagagcgtct  16118500
                       <---------HSFC1(2)
                       <---------HSFB2a(1)
                       --------->HSFB2a(1)
                       --------->HSFC1(2)
                      <---------KAN4(2)
                      --------->GLK1(2)
                      --------->ARR14(2)
                      <---------ARR14(2)
                     --------->GLK1(1)
                  --------->HSFB2a(2)
                  --------->LBD16                                               <---------ANAC58
                 <---------ANAC46                                               --------->ALFIN1
                 --------->HSFB2a(2)                                            <---------ANAC58
                 <---------HSFB2a(2)                                            <---------ANAC46
                 <---------LBD16                                            <------ZmHOX2a(1)
                <---------LBD16                                        <---------STY1(2)           -
              <---------ARR14(2)                              --------->ANAC55(2)                 --
            <------MYB83      <---------MYB52(1)              <---------ANAC55(2)                <--
         <---------ANAC58    <-----------HVH21          --------->AHL20(2)  ========================
         <---------ANAC58    <-----------TGA1         --------->ANAC58 --------->STY1(2)         ---
--------->DOF2--------->ARR14(2)                      ----------->GT1  --------->ZAT2  <---------ZAT14
----DEAR3(1)<------MYB46(1) --------->ANAC55(2)       --------->ANAC58 <---------ZAT2--------->REM1(2)
 
gcgaaagagaaggcttggttccgggaatcttccgtcatctattggagtctagagaacaagaaaatacttatccgagctaggatgtgtgtgtatagaggct  16118600
                                                                                 --------->ARR11(3)
                                                                               --------->ICU4
                                            ---------->DOF2                    <---------YAB1
                                       <---------------AGL15         --------->ALFIN1
                                       --------------->AGL15         <-----------RAV1(1)
                                       ----------->GT1             <---------ANAC46
     --------->ICU4                    <---------ZAT6              <---------ANAC58
----->ZmHOX2a(2)                   --------->ZAT14  <---------AHL20(1)    <------MYB83
------->GLK1(1)                    <---------ZAT14  <---------ARR11(3)    <------MYB46(1)
-------ARR11(3)               <---------ANAC58      --------->ARR11(3)  <---------ANAC46
======HOX2a_HOX2a             <---------ANAC58      --------->AHL20(1)<-------GAMYB
------>ARR11(3)    ----------->GT1 --------->ZAT18----------->ARR10<---------ANAC58
 
gatctctacttattaagttgccaagttaaatgagcttgtgtactgttaaaagtaagatattgttgtttttgtgtgttgggttatgattttgtctgaaata  16118700
                              --------->TGA2(2)
                              ----------->HVH21
                             <-----------HVH21
                             <-----------TGA1
                            --------->ANAC58
                            --------->bZIP60(2)
                            --------->ANAC58
                    <---------CCA1(2)
                 --------->LBD16
                --------->ANAC46 --------->ANAC58                       ---------->DOF2
                <---------ANAC55(2)                               --------->YAB1          ----------
                ----------->GT1  --------->ANAC58                <---------ATHB12      <---------TOE1(3)
      <----------DOF2       --------->ANAC46             <---------AHL20(2)    ------>ZmHOX2a(1)
--------->At4g35610---------->DOF2      ----------->RAV1(1)    --------->WOX13(1)      <---------TOE2(3)
 
agtggctgactttataaacccgtaaatctctacgtcacgcttgcaacaaaaattcgatatttgattcaatcacagaaaagtcctcccattaaggtgtaaa  16118800
                                                                                           ---------
                                                                                       <-------MYC3
                                                                                       <-------MYC4
                                                                                       ------->MYC4
                                                                                       ------->PIF5
                                                                                       <-------PIF5
                                                                                       <-------MYC2
                                                                                       ------->MYC2
                                                                                       ------->MYC3
                                                                                      <---------O2
                                                                                      --------->O2
                                                                                      --------->TGA1a
                                                                                      <---------TGA1a
                   --------->YAB1                   ----------->GT1                  ------------>OsbHLH66
               ---------->DOF2           --------->DAG2              <---------YAB1 <---------ALFIN1
->GT1      <----------ID1 <---------DAG2---------->DOF2  <------------CBF        ----------------->AGL1
 
tttttgactcaaataccacaaagcataaaccttttgacaaaccaaaagttgtatgaagaaaattggaaaactctgaatgccatttccacacgtggacact  16118900
                                                                                       <----------DOF2
                                                                                     ------>MYB46(1)
                                                                                    <---------ALFIN1
                                                                                   --------->MYB46(3)
                                                                                   <---------MYB55(2)
                                                                                  --------->ANAC58
                                  ----------->GT1                                 --------->ANAC58
                                 <---------HSFB2a(2)                             ------>NtERF2
                               <---------ANAC46                                 --------->DEAR3(1)
                           --------->ATERF1(1)                                  <---------ALFIN1
                           <------ZmHOX2a(1)                                   --------->MYB46(3)
                          --------->ZAT2                                       --------->ATERF1(1)
                      --------->ANAC58                                        ------>NtERF2
                      --------->ANAC46                                        <---------ATERF1(1)
                      --------->ANAC58           --------->MYB52(1)       <---------ANAC55(2)
                    --------->MYB52(1)         --------->ARR11(3)         --------->ANAC55(2)
                   *TSS--------->TOE1(2)      --------->YAB1             <---------LBD16       <----
                  --------->MYB46(3)   ---------->DOF2                  --------->MYB52(1)<---------AtLEC2
>ZAT18   <---------ZAT14<-----------RAV1(2)---------->DOF2          <---------TOE2(3)------>MYB83
 
attcgtttagagaacacttaaacaaacgcaggaggcctggaaaaaagaaagataacgggactcgagagattgagattacggagccacccactttcatgga  16119000
                         --------->ANAC58
                      --------->WRKY18(1)
              <xxxxxxxxxxxxxxxxsmallRNA(fl3)
         <---------At4g35610    ------->GAMYB                <---------ICU4                     ----
         --------->ZAT2  --------->ANAC58             <---------MYB46(3)                        ----
         --------->At4g35610 ----------->RAV1(1)     --------->ALFIN1                           ----
         <---------ZAT2<---------WRKY12              <---------AtMYB61                          ----
 <---------ALFIN1    <-----------HVH21             <---------MYB46(3)                          <----
--------->ZAT14     ------->GAMYB                 <---------AtMYB61                            -----
<---------REM1(2)  --------->MYB46(3)             --------->ALFIN1       ------>ZmHOX2a(1)    <-----
<---------ZAT14    <------------AtMYB77 <---------ANAC46   ------>ZmHOX2a(1)                 -------
-----ANAC46<----------DOF2--------->ANAC46        <---------ZAT6<-----------GT1     ---------->DOF2<
 
gtctacactctcagctttctcaaccgtcaaggcaacagcgatggctcgaagtagtggtggtccttcattacctctcctcactatttctaaagcacttaac  16119100
            --------->ATERF1(1)
           ----------->RAV1(1)
          --------->RAP2.3(2)
          --------->DEAR3(1)
          --------->RAP2.3(3)
         --------->RAP2.3(1)
         --------->RRTF1(1)
         --------->ATERF1(1)
        <---------ATERF1(1)
        <---------RAP2.3(1)
       --------->ATERF1(2)
       <---------ATERF1(2)
      <---------LBD16                                                 <---------ANAC46
   <---------ZAT14                                            <---------ANAC46
   --------->ZAT14                                            --------->bZIP60(2)
  <---------DAG2                                              --------->TGA1a
  <----------DOF2                                             --------->O2
--->GAMYB--------->ERF1             <---------ZAT18           <---------O2
----->RAP2.6(2)               --------->ATHB12                <---------TGA1a
----->ANAC46<------NtERF2   <----------DOF2                ----------->HVH21
----->DEAR3(1)              ------>ZmHOX2a(1)             --------->SPL7
--------AtMYB77             ============================================bZIP_DOF
---->MYB46(3)          <---------ALFIN1                 --------->LBD16      <---------AtLEC2
----At5g28300    <---------ALFIN1  <---------ANAC58    <---------ANAC46 <------MYB83
-->MYB52(1)------>NtERF2   --------->TOE2(3)           <---------ANAC58 <------MYB46(1)
---------ALFIN1<---------ALFIN1    <---------ANAC58    <---------ANAC58<---------MYB46(3)  <--------
 
cgccactttaccggcgccagacacctccatcctttattgctcgctcgctgttctccctccgtgcgacgtcttggtgggtttcatggcagtcgatttactt  16119200
                              <----------DOF2
                         <---------ZAT2
                         <---------At4g35610                                                  <-----
                         --------->ZAT2       <---------ETT(1)                                <-----
                  <---------ANAC58            --------->ANAC46                         <-----------RAV1(2)
                  <---------ANAC58      <---------MYB52(1)                          <----------DOF2
                 --------->HSFC1(2)    --------->LBD16                              ================
                 <---------HSFC1(2)   <---------ATERF1(2)                        ------>NtERF2------
                --------->GLK1(2)     --------->ATERF1(2)                       --------->DEAR3(1)
            <---------HSFB2a(2)      <---------LBD16   --------->REM1(2)     --------->DEAR3(1)
            --------->HSFB2a(2)      <---------ANAC46 <---------MYB52(1)  ==========================
         <----------DOF2 --------->At4g35610  ----------->HVH21           ---------->CDC5     ------
       --------->At4g35610  --------->At4g35610   ------>NtERF2        <---------At4g35610<------ZmHOX2a(1)
---GT1 <---------At4g35610  <---------At4g35610  <---------ALFIN1 --------------------->WRI1  ------
 
cgtcgaattcagctttgagaagcttgggagctgctgttttgccggtaatccgacaccgtttagagtgtttgtcgagctcatcgccgtctttcaggagtat  16119300
           --------->GLK1(2)
           --------->ARR14(2)
          <-------GAMYB
         <---------DEAR3(2)
         <---------MYB46(3)
        <---------DEAR3(1)                                <------NtERF2
       <------NtERF2                                     --------->LBD16
       --------->ATERF1(1)                              <---------ANAC58
      <---------ORA47(2)                                <---------DEAR3(1)
      <---------ATERF1(1)                               <---------ANAC46
      <---------RAP2.6(1)                              <------NtERF2
      ------>NtERF2                                    --------->ATERF1(1)
      <---------RAP2.3(1)                              <---------LBD16
      <---------DEAR4(2)                             --------->ALFIN1
      <---------ERF1                                 <---------DEAR3(1)
      <---------RRTF1(1)                            --------->ATERF1(1)
     <---------ANAC58                              <---------MYB46(3)
     <---------RRTF1(2)                           --------->ALFIN1
     <---------RRTF1(3)                           <---------DEAR3(1)
     <---------ANAC58                             <---------AtMYB61
     --------->ATERF1(2)                        <---------MYB46(3)
     <---------RAP2.6(2)                        --------->MYB55(2)
     <---------RAP2.3(2)                       --------->ALFIN1
     <---------ANAC46                          <---------AtMYB61
     <---------DREB2C(2)                       <---------DEAR3(1)
     <---------RAP2.3(3)                      <------NtERF2
     <---------DEAR3(1)                       <---------ABI4(1)
     <---------ATERF1(2)                      <-------GAMYB
    --------->ATERF1(1)                      <---------MYB46(3)
    <---------ABI4(1)                       --------->ALFIN1
  --------->ALFIN1                          <---------DEAR3(1)
<---------O2                                <---------AtMYB61
--------->TGA1a                             <---------DREB2C(2)
<---------TGA1a          ----------->GT1   <---------ABI4(1)
--------->O2           <---------ANAC46    <------NtERF2<---------ANAC58
==================MYC_MYB<---------ANAC46 <---------DEAR4(2)
----ARR14(2)         <---------LBD16      <---------RAP2.3(1)
----ARR11(3)     --------->ARR14(2)      <---------DEAR3(1)             ----------->GT1
==========bZIP_DOF  --------->ALFIN1     <---------RAP2.3(2)           --------->ALFIN1
--->ARR11(3)  --------->HSFB2a(2)       <---------At4g35610     ------>ZmHOX2a(2)
==========MYC_MYB<---------ARR14(2)     --------->At4g35610   --------->ARR14(2)
--->GLK1(2)<---------ARR14(2) --------->YAB1<---------ANAC46  <---------ARR14(2)
--->ARR14(2)  <---------HSFB2a(2)       --------->ATERF1(1)  <------ZmHOX2a(1)    --------->ANAC46
 
ctcaagtggcggcggttctggatttggggggtataatggtggaagcggcggtggtggtggcggaggatcggagagtggtgattccaagtcaaaactgggt  16119400
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AGI:  At4g33510.1   
Description:  DHS2 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE); 3-deoxy-7-phosphoheptulonate synthase. Identical to Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast precursor (DHS2) [Arabidopsis Thaliana] (GB:Q00218;GB:Q9SZC8); similar to DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1), 3-deoxy-7-phosphoheptulonate synthase [Arabidopsis thaliana] (TAIR:AT4G39980.1); similar to 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative [Arabidopsis thaliana] (TAIR:AT1G22410.1); similar to unknown [Populus trichocarpa] (GB:ABK94974.1); s
Range:  from: 16116450    to: 16118800    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At4g33520.1   
Description:  PAA1 (metal-transporting P-type ATPase 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism. similar to HMA8/PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2), ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G21930.1); similar to HMA8/PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2), ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT5G21930.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62668.1); contains InterPro domain Heavy metal transport/detoxification protein;
Range:  from: 16118920    to: 16120938    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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