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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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            <---------ZAT14                                             ----------->GT1
           <---------ZAT6                                              ----------->GT1        ------
         <---------ANAC58                                       ----------->HVH21             <-----
         <---------ANAC46         <----------ID1              --------->LBD16                <------ZmHOX2a(1)
->GT1    <---------ANAC58         ----------->GT1           <---------LBD16      ---------->DOF2   -
 
aacctagtaattgagtgttcagacacttcaaaaattagggaaaaaactaaaattcaaaacttctccggtgaaggaagataaaacaaaagaagaagaggaa  16116000
                                                        --------->ALFIN1
                                                      --------->LBD16
                                               --------->ARR14(2)                <----------DOF2
                      --------->ANAC58         --------->GLK1(1)        <---------At4g35610
         <---------YAB1    <------ZmHOX2a(2)   <---------GLK1(1)        --------->ZAT2
--->ARR14(2)          --------->ANAC58    <---------At4g35610           <---------ZAT2
----ARR14(2) --------->ALFIN1        <---------LBD16<---------LBD16     --------->At4g35610
-------->ANAC46       --------->ANAC46    --------->At4g35610        <------ZmHOX2a(1) ----------->GT1
 
acacgaagacttacgagtgctggacacgagatcgaacttctctggagcagaattctccggtggagaagaagaggaagctgaagactttgaaggtgaaatg  16116100
                                             --------->ARR11(3)
                                             --------->ARR14(2)
                                             <---------ARR14(2)
                                             --------->GLK1(2)
                                             <---------ARR11(3)
                                       --------->ANAC58
                    <------ZmHOX2a(1)  --------->ANAC58
            --------->At4g35610      --------->MYB52(1)       <---------GLK1(1)
            --------->ZAT2          <------ZmHOX2a(1)         --------->GLK1(1)    <----------ID1
            <---------At4g35610  <---------LBD16          --------->LBD16   --------->At5g28300
            <---------ZAT2    --------->GLK1(1)          <---------LBD16    <---------------------WRI1
       <------------AtMYB77   <---------GLK1(1)         <---------LBD16  ------->TEIL         ------
     --------->MYB52(1)   --------->YAB1  <---------GLK1(2)--------->LBD16 ----------->GT1    <-----
 
gaattagccaactgtagctgagaggacaatcggaactcaggaacggaatatctgattccaccgggaaatctccatgaacggtgaagagaacaagggaaga  16116200
        ==================================HOX2a_HOX2a
        <------ZmHOX2a(1)
      --------->ALFIN1
 ---------->DOF2                --------->ATHB12                         <-----------HVH21
--->At4g35610                  <---------ATHB12                   ---------->DOF2
----At4g35610       ---------->DOF2------>ZmHOX2a(2)        ----------->GT1
 
tgagaaaaggaggagcttgaagagaaagaatcaaatgatcggccataacttaaacattgaagtctgtaacaaagagtgtcacagaaatggtttagagtag  16116300
                    <---------O2
                    ===========================MYC_MYB
                    <---------ANAC58
                    --------->O2
                    --------->bZIP60(1)
                    <---------bZIP60(2)
                    <---------bZIP60(1)
                    <---------ANAC58
                    <---------ANAC55(2)
                    --------->ANAC55(2)
                    ----------->GT1
                   ----------->STF1
                 ----------->TGA1
                 ----------->HVH21
               <---------ANAC58
               <---------ANAC58                                          <---------CCA1(1)
          <---------ICU4                                                --------->ARR11(3)
          --------->ATHB12                                              <---------ARR11(3)
         <---------YAB1          <---------MYB46(3)              <----------DOF2
         --------->ICU4        <---------MYB52(1)                <-----------HVH21       <---------MYB52(1)
       --------->YAB1      --------->MYB52(1)     *TSS    --------->ALFIN1    <-----------RAV1(1)
      <---------YAB1<---------TGA1a    ------->GAMYB  --------->At4g35610<---------RVE1(1)        --
 
acgaagaagatgataattgggtgacgttacaaccggtggtaaccctctgtttctatcagatgtgttcgcttcacagatattttgtggctaccgttttttt  16116400
             <---------AHL20(2)
           ----------->TBP
  <------------CBF      <----------DOF2
 --------->ATHB12    <---------ARR11(1)                                                --------->ARR11(3)
 --------->ATHB51    <---------ARR11(3)                                            ---------->DOF2
 <---------ICU4      --------->ARR11(3)                                   --------->YAB1<------ZmHOX2a(2)
<---------YAB1      <---------CCA1(2)                               <-----------HVH21  <---------ARR11(3)
--------->ICU4    --------->YAB1                        --------->At4g35610  <---------GLK1(1)  <---
------->YAB1--------->YAB1   <-----------GT1     *TSS   ------>NtERF2  --------->WOX13(1)      <----
 
ttcataattgggctataaaaatcatatctttttgactcttctcttctctatccattctctgccgaactagtcgtcaatcgaaatcccaaagatcagcgat  16116500
                                                                ------>NtERF2
                                                                --------->ORA47(1)
                                                                <---------SPL7
                                                     --------->ANAC58
                                                     --------->ANAC58
                                                  <---------MYB52(1)
                                                 <-----------TGA1
                                                 <---------RAP2.6(3)
                                                 <-----------HVH21
                                              ------>MYB46(1)   <-----------HVH21
                                              -------->P    --------->ANAC46
     <---------REM1(2)   --------->ANAC58     ------>MYB83 ------>ZmHOX2a(1)                   <----
------MYB46(3)           --------->ANAC58    <---------ALFIN1  --------->DEAR3(1)----------->RAV1(2)
-----AtMYB61        ------>ZmHOX2a(1)   ------>ZmHOX2a(1) <---------ALFIN1<----------DOF2     <-----
 
ggtgactctaaacgcttcttctcctctcacgaccaagtcgttcctcccctaccgtcacgctcctcgccgtccaatctctttctcccctgtcttcgccgtt  16116600
                           --------->YAB1
                          <---------ATHB12
                        --------->WOX13(1)
                    -------->P
               --------->GLK1(1)                  xxxxxxxxxxxxxxxxx>smallRNA(se3)
            --------->ANAC58       --------->At4g35610                                       <------
    ----------->HVH21 --------->MYB46(3) <-------GAMYB                                     ---------
  ----------->RAV1(2)--------->ANAC46   ----------->GT1                                 --------->MYB52(1)
---TEIL     --------->ANAC46       <---------At4g35610                         <----------DOF2
----MYB52(1)--------->ANAC58 --------->At4g35610  <---------ANAC46        ---------->DOF2<---------LBD16
 
cattcgactgaccccaagaaatctacccaatcagcctccgcttcggttaaatggagtctagagagttggaagtcgaagaaagctttgcaattgccggatt  16116700
                                                                                                 ---
                                                                                                ----
                       --------->ARR14(2)                                                      <----
               <---------YAB1                                                                 <-----
  xxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                    <---------ARR14(2)
------>ZmHOX2a(1)      <---------ARR14(2)       ------>ZmHOX2a(1)                     --------->ARR14(2)
---GLK1(2) --------->ARR11(3)             <----------DOF2                            <------ZmHOX2a(1)
>LBD16    <------ZmHOX2a(1)        <----------DOF2 ------>ZmHOX2a(1)       <------ZmHOX2a(1)  <-----
 
atcctgatcagaaggatgttgattcggttctacagacgctttcttcttttcctcctatagttttcgctggtgaggctaggaaactagaggataagcttgg  16116800
                                                                 --------->ZAT6
    <---------ARR14(2)<---------YAB1                            <---------TOE2(3)
------->DOF2  --------->ANAC58            --------->At4g35610   <---------TOE1(3)          <--------
----->WRKY18(1)   <----------DOF2         <---------At4g35610  <-----------GT1             <--------
-------HVH21  --------->ANAC58      <---------MYB46(3) --------->ANAC58                <----------DOF2
-MYB46(1)  --------->WRKY18(1)     <---------YAB1      --------->ANAC46            <---------ALFIN1
-MYB83    <-----------HVH21     --------->ALFIN1       --------->ANAC58    --------->TOE2(3)      <<
 
tcaagcggctatgggtcaagcctttatgcttcaaggtggtgattgtgctgagagtttcaaggaatttaacgctaataacattagagacacctttagggtt  16116900
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AGI:  At4g33500.1   
Description:  protein phosphatase 2C-related / PP2C-related. similar to catalytic [Arabidopsis thaliana] (TAIR:AT4G16580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16183.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045)
Range:  from: 16112661    to: 16116351    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g33510.1   
Description:  DHS2 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE); 3-deoxy-7-phosphoheptulonate synthase. Identical to Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast precursor (DHS2) [Arabidopsis Thaliana] (GB:Q00218;GB:Q9SZC8); similar to DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1), 3-deoxy-7-phosphoheptulonate synthase [Arabidopsis thaliana] (TAIR:AT4G39980.1); similar to 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative [Arabidopsis thaliana] (TAIR:AT1G22410.1); similar to unknown [Populus trichocarpa] (GB:ABK94974.1); s
Range:  from: 16116450    to: 16118800    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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