Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      ------>ZmHOX2a(1)                                                                                   --------->TOE2(2)                                                                                <---------ARR14(2)                                                                            --------->HSFB2a(2)                                                  ----------->GT1          ================HOX2a_HOX2a                                               --------->ATHB12            ------>ZmHOX2a(2)        -                                               -------->ATHB1             --------->GLK1(1)        --                                               <---------ICU4             =================HOX2a_HOX2a                                               --------->YAB1             <------ZmHOX2a(2)       ---                                              <---------YAB1             <---------ARR11(3)      ----                                              <---------ATHB12           --------->ARR11(3)     -----    --------->AHL20(2)                      --------->WOX13(1)           <---------ARR14(2)  -------- ----------->GT1                         --------->GLK1(2)               --------->ARR14(2)  <------- >ZmHOX2a(1)                    <---------At4g35610                ---------->DOF2 --------->TOE1(2)- -->TOE2(3)         <<<<<<<ZML2 --------->At4g35610         ----------->RAV1(2) --------->ARR14(2)<--   aagagattaaaaacaaaccctagaactatccctcatcagagaaaatccatcattgttaaaacccctgataaaagggatctcgaatccttcgattaagcta  16090400    --------->ANAC58    --------->ANAC58                                                         --------->WRKY45    --------->ANAC46                                                         --------->WRKY12  ----------->RAV1(1)                                                        --------->WRKY38(1)  <---------ALFIN1                                                          <---------MYB52(1) <---------MYB55(2)                                                      --------->MYB46(3) --------->MYB46(3)                                                   <---------ALFIN1 ----->MYB46(1)                                                      --------->MYB46(3) ------->ANAC46                                                    <---------ARR11(1) ------>AtMYB61                                                    <-----------ARR10 ----->MYB46(3)                                                    --------->ARR14(2) --->P   ----------->GT1                         ---------->DOF2   <---------ARR14(2) ->At4g35610                                <----------ID1        --------->GLK1(1) --At4g35610                             <---------ARR14(2)       <---------CCA1(2) ----->MYB83                             --------->ARR14(2)     --------->ANAC55(2)                -- -------ALFIN1                      --------->At4g35610         <---------ANAC55(2)         ---------   ccacccacacaaggtaataccaagatgatgaaattagaagcagaatacgagaaaagccctctcaacgcgtatccacccgttgacttaatttgaagagaaa  16090500                                                                                                -----                                    ----------->GT1                                            ------                                    --------->ANAC58                                           ------                                    --------->ANAC58                                           ------                                   --------->DAG2                                            <-------                                  ---------->DOF2                                            --------                            ------------------------>ANAC81                                 ------>ZmHOX2a(2)                          <---------ARR14(2)                                               <------ZmHOX2a(2)                        --------->LBD16                                                   <---------ARR11(3)                       <---------ANAC46                                                ------>NtERF2 ------->YAB1         <---------LBD16         ---------->DOF2                      --------->ANAC58 -->GT1----------------->AG------------------------>ANAC81       <----------DOF2   --------->ANAC58 <   atcaaaatacccaaatcgattaatcgcggaaaccaaaaaagcaaaaaaaaaagaaactgaagctagacttttccgattagaaggaacgccgagatcgctg  16090600  --------->WRKY45                                                    ------>ZmHOX2a(1)  --------->WRKY12                                                    <---------HSFB2a(2)  --------->WRKY38(1)                                                 --------->LBD16 <---------MYB52(1)                                                   --------->HSFB2a(2) --------->DOF5.7(2)                                                 <---------LBD16 ->NtERF2                                                           <---------ANAC46 ----->HVH21                                                   <---------CCA1(1)      --------->DAG2 --->WRKY12                                                   --------->ARR11(3)     ---------->DOF2 --->WRKY38(1)                                  ---------->DOF2<---------RVE1(1) --------------->AGL15 --At4g35610                                  --------->ANAC58<---------ARR14(2) <---------------AGL15 ->At4g35610                                  --------->ANAC58<---------ARR11(3)<-----------------AGL3 -------GAMYB          ----------->GT1----------->GT1  <------ZmHOX2a(1)     --------->AHL20(1)   ---   accgttgactacttaatgctgagaagagagaaaactgagatagagaaaacgaaaggaggaagaagatatttcctggaaatatactaaaaaagggtcgaaa  16090700                                                                          *TSS                                                                          <----------DOF2                                                                       <-----------GT1                                                                   <---------ICU4                                                                   --------->AHL20(2)                                                                   --------->ATHB51                                                                   <---------AHL20(2)                                                                  --------->ICU4                                                               <---------AHL20(2)                                                               --------->AHL20(2)                                                               <---------YAB1 <---------ANAC58                                             --------->ANAC58 --------->AHL20(2)                                             --------->ANAC58 <---------AHL20(2) ---------->DOF2     --------->CCA1(2)                ------>NtERF2          --------->YAB1   <---------ANAC58      < ------->DOF2    <------ZmHOX2a(1)   --------->DEAR3(1)    ------->TEIL<---------AHL20(2)     <------   caaagagagatgagagagaggagagaaaccaagttatcgccgagagcaaggaaggaagacgaattttaattattttctttgcttaaagaagggattttac  16090800                                                                            <---------ANAC58                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            =========================                                                                            <---------TGA1a                                                                            <---------O2                                                                            --------->O2                                                                            <---------bZIP60(2)                                                                            =========================                                                                           ----------->bZIP911(1)                                              <---------TOE2(3)            ----------->STF1                                              <---------TOE1(3)           <---------TGA2(2)                                              <---------YAB1  ---------->DOF2 --------->ALFIN1               <---------ZAT6    <---------AHL20(2)           ========================bZIP_DOF       <---------MYB46(3)     <---------AHL20(2)  ----------->GT1      ----------->bZIP910(2) -------GAMYB  ----------->GT1--------->AHL20(2)<------------CBF    <------ZmHOX2a(1)             <-- -----GT1<---------------AtSPL8  --------->AHL20(2)       <----------ID1 ----------->TGA1    --------   tgggttgagttgttgtactgtgaaaactatattaaaaaaatgacatttaagattgagaaaacgacaaagaggatgatgacgtggacgagcattttcaaag  16090900                                                                          <---------YAB1                                                                   <---------DAG2                         --------->ANAC58                          --------->TOE2(3)                         --------->ANAC58          <---------MYB46(3)   --------->YAB1                        --------------->AtSPL3   --------------------->WRI1    --------->WOX13(1) ===bZIP_DOF        ---------->DOF2         <---------ATHB12    <---------ALFIN1 ========================bZIP_DOF        --------->LBD16<---------YAB1 <---------YAB1 ----------->HVH21 --------DOF2 ---------->DOF2--------->ANAC58  <---------YAB1  --------->DEAR3(1)   --------->At4g35610 -->DOF2     <---------WRKY45--------->ANAC58--------->YAB1    --------->MYB46(3) --------->YAB1-----   cttttttagagctagtcaaagtcaaagacgcacgacttcattccgaatcatgtttgttatgttcgcccaccttatcatcatccatcatatgacattagat  16091000                                                                           --------->At4g35610                                                                           <---------ZAT2                                                                  <---------At5g28300                                                              <---------ICU4--------->AGP1                                                             ------>ZmHOX2a(1)         <---------LBD16                                                             <---------YAB1--------->ZAT2                                                     --------->YAB1        <---------At4g35610<------                                                     <---------ICU4 <---------ATERF1(2)<---------ANAC58                       --------->YAB1             --------->YAB1 <-----------GT1       <---------ANAC58     <---------YAB1   <---------YAB1              <---------ICU4 <<<<<<<<<GT-2     <---------AHL20(2)     --------->ICU4 --------->YAB1          <-----------GT1--------->YAB1<---------ALFIN1   <-------- ---->CCA1(2)    ------->TEIL        ----------->GT1<---------YAB1--------->MYB52(1) <-----------GT1   ataaaccatgatggtcatgaactcatgatagttgatagtgagttatataccatcatcataatcctaattaccggcccagctctattttttcgggctttta  16091100            <------MYB46(1)            <------MYB83          --------->KAN4(2)                               --------->ICU4  --------->ATHB12             <---------MYB52(1)                   <---------AHL20(2)            <-- ---YAB1 <---------ANAC58   <-------TEIL          ---------->DOF2<---------AHL20(2)  <---------YAB1<- --DOF2  <---------ANAC58   <---------------------WRI1 <----------DOF2    <----------DOF2         ---   ttgtttattgggcttggtcttaatagcaagttcgtttattccaaagatgagcaaaagcttttttgatttttttattcttttttaaagattatagctctaa  16091200        --------->AHL20(2)                                                                         <-    <---------YAB1                      ----------->RAV1(2)                       --------->YAB1   <-  <-----------GT1          --------->At4g35610         --------->AHL20(2) --------->ATHB51       <--- -------AHL20(2)           <---------ZAT2              <---------AHL20(2)--------->ICU4 <---------AHL20(2) --------ICU4  ----------->GT1   <---------KAN4(1) --------->AHL20(2)    <---------YAB1 --------->AHL20(2) ------>AHL20(2)           <---------At4g35610    <---------ATHB12      --------->TOE2(3)    <-------   aaaattacaattcaatattgaaaaatgtaagctgaataatccatctggtccaatgaattaaacaaaacaaaaaacattattgtatcatatataatttact  16091300  Previous    Next  AGI:  At4g33430.1    Description:  BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase. Identical to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor (BAK1) [Arabidopsis Thaliana] (GB:Q94F62;GB:Q9SZC0); similar to SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1), kinase [Arabidopsis thaliana] (TAIR:AT1G71830.1); similar to SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT1G34210.1); similar to ATSERK4 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4), protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT2G13790.1); similar to hypothetical protein [Viti Range:  from: 16086405    to: 16090774    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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