Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------At4g35610                                                                                --------->At4g35610                                                                                --------->ATERF1(1)                                                                                <------NtERF2                                                                               <---------ATERF1(1)                                                                               ------>NtERF2                                                    ------>NtERF2              <---------DEAR3(2)                                                    <---------ATERF1(1)       <---------DEAR3(1)                                                   --------->RAP2.3(2)        <---------ATERF1(2)                                                   --------->DEAR3(1)       <-----------HVH21                                                   --------->DREB2C(2)    --------->DEAR3(2)                                                   --------->RAP2.3(3)    <------------AtMYB77                                                  <------NtERF2           --------->MYB46(3)                                  ----------->GT1 --------->ATERF1(1)   --------->MYB52(1)   <-------                                 <---------TOE1(3)--------->ORA47(2)    <---------ARR14(2) --------->LBD16                                 <---------TOE2(3)--------->RAP2.3(1)   --------->ARR14(2)------->GAMYB                            ------->GAMYB        <---------ATERF1(1) <---------ANAC58    --------->DEAR3(2)                          ------>MYB83         <---------ABI4(2)<------ZmHOX2a(2)        --------->MYB46(3)                          ------>MYB46(1)      --------->MYB46(3)    <---------ANAC58  --------->MYB52(1)                         --------->MYB52(1)   --------->ANAC58  --------->CCA1(2)      --------->ARR14(2)                        --------->AtMYB61     --------->ANAC58 <---------ARR11(3)      <---------ARR14(2)                        --------->MYB46(3)    <---------ATERF1(1)------>ZmHOX2a(2) --------->At4g35610                        --------->DEAR3(1) ------->GAMYB       --------->AGP1 --------->ATERF1(2)   <---------ANAC46    --------->MYB46(3) --------->ANAC58     <---------ARR14(2)  <------NtERF2 ------>ZmHOX2a(2)  <---------ZAT18       --------->ANAC46     --------->ARR11(3)  <---------At4g35610 ------ZmHOX2a(2)   --------->ZAT18       --------->ANAC58 --------->ANAC46------->GAMYB <----------- -->RAV1(1)   <----------CDC5--------->At5g28300------->GAMYB  --------->ARR14(2)<---------DEAR3(1)<-   cgatcgcgtttaaaacgctgagtccaccaacggtgaaggtaacaacgcaagcgccgactccacgagatctagcgtaaccgtcggcagcgtaaccggcgtt  15954400                               --------->LBD16                              <---------RAP2.6(2)                                                   <                             <---------LBD16                                                    -----                             <-------TEIL                                  --------->LBD16     ------                            --------->ALFIN1                  ----------->GT1                  <-----                           <---------SPL7                    <---------TOE2(3)   ----------->GT1-----       --------->REM1(1) <---------------AtSPL3        ---------->DOF2     --------->HSFB2a(2)<------  ----------->GT1   <------MYB83                    --------->ANAC58       <---------HSFB2a(2)------- --ANAC46           <------MYB46(1)                 --------->ANAC58      <---------LBD16    <------- -AtMYB77          <---------TOE2(3)                --------->AtLEC2<---------GLK1(1)        -------- --------At4g35610 --------->MYB59                 --------->WOX13(1)    <---------LBD16     --------   tagctcgttacaacatccgattaggttgaggtccggctcagccatgaggtgatcaagcaaagtgaggttgaaatctccgggaacagagaaaacatccgta  15954500    <---------ANAC46   <---------ZAT2   <------NtERF2   --------->ZAT2  <---------DEAR3(2)  ------>NtERF2                            <---------ANAC58 <---------DEAR3(1)                        <---------TGA1a <---------ATERF1(2)                       --------->TGA1a --------->DEAR3(1)                        <---------ANAC58 --------->ATERF1(2)                       --------->O2 ---------LBD16                            <---------O2 ----->DOF2                        <------NtERF2 ----->HVH21                   ------>NtERF2 ----MYB52(1)                  <---------SPL7<------NtERF2 ---->SPL7                    --------->ATERF1(2) -----HVH21                   <---------RAP2.6(2)                  <---------ANAC46 -->LBD16                     <---------ATERF1(2)                 --------->At4g35610               < --ANAC55(2)                 --------->RAP2.6(3)                  <---------At4g35610            ---- ->ANAC55(2)                --------->MYB52(1)      <---------MYB46(3)  <------ZmHOX2a(1)   <-------- ->ANAC46                  ----------->HVH21<-----------HVH21<---------YAB1            <---------ANAC46   acgccggcttggacgagacgacgagctaagtgacggccgagagtcgcgtcgcagtagttgatggtgatagcggaggaaggaacagagttgtggattgttg  15954600                                      ------>NtERF2                                 --------->SPL7           <-------GAMYB   --------->DEAR3(1)           =======================MYC_MYB          <-----------RAV1(1)   <---------MYB52(1)          --------->MYB52(2)   <---------SPL7          --------->MYB55(2) <------NtERF2        <---------MYB52(1) <---------DEAR3(1)      <---------ANAC58    --------->ATERF1(1)      <---------ANAC58   <-----------HVH21      --------->YAB1      <---------ANAC46   <---------ATERF1(1)   <---------ATHB12     <------NtERF2      <---------O2  <---------DEAR3(2)                                        <----    --------->ABI4(2)   --------->ANAC46<---------ANAC58                                        -----    ------>NtERF2       --------->TGA1a <---------ANAC58   <-----------------AGL2      <------MYB83  --------->ATERF1(1)   <---------TGA1a<------NtERF2       ------>ZmHOX2a(2)           --------->HSFB2a(1) <---------ATERF1(1)    --------->O2 <---------DEAR3(1)   <------ZmHOX2a(2)            <------MYB46(1) <---------DEAR3(2)<---------ZAT14<---------MYB46(3)     --------->ARR14(2)            <---------HSFB2a(1) ---------DEAR3(1) --------->ZAT14--------->MYB52(2)     <---------ARR14(2)           <---------AtMYB61 ------->HVH21 <xxxxxxxxxxxxxxxxsmallRNA(le3)  --------->ICU4              --------->AtLEC2     <---- -MYB46(3)<---------MYB46(3)------>NtERF2    --------->WOX13(1)          <---------AtLEC2       -----   cgacggtgccgtttgttggactacagacgtcgccgttcgtcggcttgcaatcatcgatcgatccgattttggtgtccatggaaatgggaaggtttgagtt  15954700                                                             <---------YAB1                                                           <---------AHL20(2)                                                          <-----------------AGL2 --------->MYB52(1)                                    <----------DOF2 -----ZAT18                                       <-----------GT1 ---->ZAT18          <-----------HVH21          --------->CCA1(2) -----ZAT14 <---------AHL20(2)                 <---------ARR11(3)         *TSS     --------->YAB1  <- ---->ZAT14 --------->AHL20(2)    ------->TEIL --------->ARR11(3)       ----------->GT1        ------   cactaacagagaaattaaaaaactgtcaagtttgtgtatgtgtgtgagagatatactctttttatttttgggatgagtaacaaaatgagaatgggagagg  15954800                                                                                                  ---                                                                                                  ---                                                                                                -----                                                                                                -----                                          <------MYB83                                 --------->ANAC58                                          ----------->GT1                              --------->ANAC58         <---------MYB46(3)               <------MYB46(1)                              ----------->GT1 <-----------TBP                          <---------MYB46(3)                          --------->DAG2 --------->AHL20(2)                      <---------AtMYB61                           ---------->DOF2- ----------TBP                <------ZmHOX2a(1)                             <---------ANAC58   ------ ----->GT1                 <------ZmHOX2a(1)               <----------DOF2  <---------ANAC58 --------   tttttatatagttgttggattagagactaggaggaatacatgggtggttttttgactagtggtttttggtttctgttttcttgtgcaaaaagcaaaaaaa  15954900        <----------DOF2                               <---------DREB2C(2)   <---------MYB59                                   --------->DDF1 --------->ARR11(3)                       <---------ICU4 <-----------ARR10                        -------->ATHB1 <---------ARR11(3)                       --------->ATHB12 ------>AHL20(2)                          --------->ATHB51 ------>YAB1                              -------->HAHB4 ---->AHL20(2)                            <---------AHL20(2)           <---------At5g28300 ---->AHL20(1)           <---------ATHB12<---------ATHB51          ------->TEIL -------->CCA1(1)----------->HVH21       --------->ICU4          <-------TEIL       --------->YAB1 --->YAB1      --------->CCA1(2)         <---------YAB1<---------DEAR3(2)          <---------YAB1 ->AHL20(2) <---------TOE2(3)   <<<<<<<<<TBF1      <-----------RAV1(1)<-----------GT1              --   taatatctaactttgagatttgacccaaacattcttcttcttaattattgtttatgtcggtctaaaatgcatttactgttttagtatcatactactccca  15955000                                --------->YAB1                              <---------ARR11(3)                    --------->ATHB12     ----------------->AG                   <---------YAB1        ----------------->AGL1                            --------->YAB1                 <-----------GT1--------->TOE2(3)                                          -------->HAHB4            <---------GLK1(2) --------->AHL20(1)                                           <---------ICU4      ----------->HVH21       --------->ARR11(3)                     <---------YAB1       --------->ICU4     --------->At5g28300     --------->RVE1(1)                    <---------MYB52(1)------>ZmHOX2a(1) -------->DOF2<---------ICU4 --------->CCA1(1)       --------->TOE2(3)     <---------YAB1 <---------ATHB51   gtaaggctgtaacagattattaccattggaaatatcttaattttccaaaattgaacatcaatacatcagttatttttgtgattctcctcttaattatgaa  15955100                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                               <---------ICU4                                                                               <--------ATHB1                              --------->ARR14(2)                               --------->ATHB51                              <---------ARR11(3)                              <---------ATHB12                              --------->ARR11(3)                       <------NtERF2                              <---------ARR14(2)                      ----------->GT1                     ----------->GT1                                  --------->LBD16                   ---------->DOF2 <---------ALFIN1                 <---------LBD16   --------->ZAT14           --------->TOE1(2)  <-----------GT1             <---------TOE1(3)   --------->ICU4        -          <---------ANAC58 --------->YAB1                 <---------TOE2(3)   <---------ATHB51      <          <---------ANAC58<---------YAB1           <---------AHL20(2)--------->RAP2.6(2)         <---   ctaatttgttatacgtgggaacaaagttataatatccccattccaaatttgagttaatttcaggtttttagccggaaacaataatttgtatactcatcag  15955200                                                                                  <---------bZIP60(1)                                                                                  --------->bZIP60(1)                                                                               ----------->HVH21                                                                             <---------ANAC55(2)                                                                             --------->ANAC55(2)                                                                             --------->O2                                                                             <---------O2                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                             <---------TGA1a                                                                   --------->ANAC58                                                                   --------->ANAC58      ----------->GT1                                              --------->ANAC46 --------->ATHB12              <---------TOE1(3)                 --------->MYB52(1) --------->ATHB51              <---------TOE2(3)             <-----------HVH21 --------->ALFIN1 -------->ICU4            <----------DOF2               <---------ANAC58     --------->TGA1a ---------YAB1        <-------TEIL      <---------ATHB12<---------ANAC58--------->ANAC58        <---- ------MYB52(1)<----------DOF2---------->DOF2        <---------WOX13(1) --------->ANAC58        <----   ttattattgagttaattctttgggttcacttttaaagtttcaatgaagaagtgtaattgctagcgtcaaacggcaagagacgtgatgccatttgcatttg  15955300  Previous    Next  AGI:  At4g33070.1    Description:  pyruvate decarboxylase, putative. similar to PDC3 (PYRUVATE DECARBOXYLASE-3), pyruvate decarboxylase [Arabidopsis thaliana] (TAIR:AT5G01330.1); similar to PDC2 (PYRUVATE DECARBOXYLASE-2), pyruvate decarboxylase [Arabidopsis thaliana] (TAIR:AT5G54960.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT5G01320.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAL37492.1); similar to pyruvate decarboxylase [Dianthus caryophyllus] (GB:AAP96920.1); similar to pyruvate decarboxylase 1 [Lotus corniculatus] (GB:AAO72533.1); contains InterPro domain Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Range:  from: 15952292    to: 15954774    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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