Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------ANAC58                                                                         <---------ANAC58                                                                       ------->TEIL                                                                       --------->ARR11(3) --------->HSFB2a(2)                                --------->ATHB51   <---------ARR14(2) <---------HSFB2a(2)                               <---------YAB1      <---------ARR11(1) ----->TOE1(2)                                   --------->YAB1        --------->ARR14(2)           < ----ICU4                           --------->YAB1 --------->ICU4     <---------CCA1(2)             < >YAB1                  --------->CCA1(2)     ----------->GT1         <---------ARR14(1)           --   ctacgagaaaacaaatatagaattagagatgagatgtatgagaatgttttgttataattgaagtctttgttcgtatcttgcatcagaagtatgactcttg  15935000          <---------HSFB2a(2)          --------->HSFB2a(2)   <---------WRKY12   <---------WRKY45   <---------WRKY38(1)                                                                      <------MYB83  <<<<<<<<<<WRKY26                                                                          <------MYB46(1)  <<<<<<<<<<WRKY38                                                             --------->ARR11(3)  <<<<<<<<<<WRKY43                                             <---------AHL20(2)          --------->MYB59  <<<<<<<<<<WRKY11                                            <---------AHL20(1)   --------->ANAC55(2)  --------->WRKY18(1)                                         <---------AHL20(2)   <---------YAB1  <<<<<<<<<<WRKY6                                    <---------ANAC58          <---------GLK1(2) ------MYB46(1)                                      <---------ANAC58    --------->YAB1  <---------MYB52(1) ------MYB83             --------->YAB1              <---------ANAC46  --------->AtLEC2  <<<<<<<<<MYB98 ------->MYB59       <---------YAB1           --------->ICU4  --------->AHL20(2)   <---------ANAC55(2)   tttggtcaacttgcagaaaaatgactattacaatgcgaaatactagtaatgttttgcgtcttaataaaatttcattcaaaagattatgtaagttaggttt  15935100                                                          ----------->GT1                                                         ----------->GT1                                                       ---------->DOF2                                                     --------->AHL20(2)                                                  --------->ATHB51                                                  <--------HAHB4                                                  -------->HAHB4                                                  <--------ATHB1                                                  --------->YAB1                                                  <---------ICU4                                                 <---------YAB1                                   <---------GLK1(2) <---------AHL20(2)                                 <---------YAB1  --------->ICU4                                ------                                 --------->ICU4  <---------ATHB51                             -------          <------------------------ANAC81        --------->AHL20(2)                 --------->YAB1  -       <---------At4g35610------>ZmHOX2a(1)    --------->YAB1                   <---------MYB52(2)  <    <---------At5g28300   <---------CCA1(2)  <---------AHL20(2)               ----------->RAV1(1)   <   <-----------GT1    <-----------GT1        --------->AHL20(2)              <----------ID1  --------   gcattttacagttgattttgtttttctcctatctcatgattctctgttttaataattaaaagttaaaatttagaaaatagccacaaacatattcaaaaag  15935200                                                --------------->AGL15                                                <---------------AGL15                 <-----------------AGL1        ----------------->AG              ------->GAMYB                    <---------ANAC46                       --------->ARR14(2)              --------->DEAR3(1)               ======================================================             <------------AtMYB77      ------>ZmHOX2a(1)                            <------NtERF2             --------->DEAR3(2)       --------->TOE2(3)                             ----------->HVH21             --------->MYB46(3)   --------->KAN4(2)                               <---------LBD16            ------>MYB46(1)      --------->HSFB2a(1)                         ---------->DOF2 <---------AHL20(2)              <---------HSFB2a(1)                      ----------->RAV1(1)<------- ----->GT1  --------->MYB52(1)   <---------HSFC1(2)                     <-----------------AGL1 ------ -->DAG2    ------>MYB83         --------->HSFC1(2)                    --------->PCF2 ------->TEIL  - -------->ARR11(3)               --------->KAN4(1)                     <---------PCF5 <---------ARR14(2) ---------AHL20(1)               <---------KAN4(1)                <---------ARR14(2)<---------SPL7--- ---------ARR11(3)----------------->AGL1       ----------------->AGL1 <-----------TCP11(1) <---------CCA1(2) -->DOF2    -------->P          <---------KAN4(2)                 --------->GLK1(2)--------->RAP2.6(2)   tatatatttgggccaaccggcccagtaagggaagaatgttccttaagttgcctaaatgagcgactgagaaactggcccacaaaggccggacctgtatcat  15935300            --------->TOE1(3)            ---------->DOF2     --------->LBD16                <---------------AGL15    ------->GAMYB                   --------------->AGL15   <---------LBD16             --------->HSFB2a(1)                                      <---------KAN4(2)  --------->MYB52(1)          ------>MYB46(1)                                           ---------->TaMYB80 ===================================================MADS_MADS--------->ATHB51           --------->ARR14(2) --YAB1     --------->TOE2(3) ------>MYB83--------->DAG2    --------->ICU4       <---------ANAC55(2) --->WOX13(1)                --------->MYB52(1)    <----------DOF2             --------->ICU4 -------->MYB46(3)          --------->TOE2(2)   <---------ALFIN1          ----------->GT1     <------ ------>YAB1<----------DOF2--------->MYB46(3) ----------->RAV1(1)<-----------RAV1(1)    <---------ARR14(2)   tcacaaccggaaaactttaaaactaataaaccaacgttcttaaaaaagcgacactttgggccataatttgttgggaagggaataagtaagaatatgcttt  15935400                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                <---------CCA1(2)              --------->LBD16                                     <-              --------->AHL20(2)             <---------LBD16                                       <-          --------->ATHB12                   <---------ANAC58                                      --   <---------ARR14(2)                        <---------ANAC46                                     <--   --------->ARR14(2)                        <---------HSFB2a(2)                                 ----   <-----------ARR10                         <---------ANAC58                                    <---  --------->GLK1(1)                          --------->HSFB2a(2)                                 ----  <---------GLK1(1)                         <---------LBD16                    ---------->DOF2  <----  <---------CCA1(2)*TSS         <---------CCA1(2)                        <---------ALFIN1   <-------- ----DOF2<---------YAB1    <---------At4g35610--------->LBD16     <---------ALFIN1          ---------   gggcatatctgatgatttatatctgtctcatctcatctctcatcgttccgggagaagagaagagagacccatccctcacttcaaagttcaaagtctcgaa  15935500     --------->HSFB2a(2) ------>ZmHOX2a(2) ------ZmHOX2a(2) --------ARR11(3) ------->ARR14(2) --------ARR14(2) ------->ARR11(3) ----------ARR10 --------ARR14(3) ------->ARR14(3) ----ZmHOX2a(1) ----->HSFC1(2) ------HSFC1(2) ----->HSFB2a(1)                                  <---------ATHB12           <---------LBD16 <------- -----TOE1(2)                                --------->ANAC58              <-----------GT1   <------- -HSFB2a(2)                             <---------TOE2(3)         ------->TEIL               <------- >HSFB2a(2)               --------->GLK1(2)  --------->ANAC58  <---------ATHB12--------->LBD16<------   ggatcttctccaactctctctaaacaagattccaaattttcaaaggtaagcaatcgtttcttctaatgaatttcatttctccggttttgtaagttgagtg  15935600                                                              <---------ANAC46                                                              <------MYB83 <---------ANAC58                 --------->YAB1              <------MYB46(1) <---------ANAC58              <---------GLK1(1)             --------->MYB59 --ANAC58                      --------->GLK1(1)           <---------MYB52(1)               <-------- --ANAC58                    <------ZmHOX2a(1)            <---------At4g35610          ------->TEIL --ANAC46               --------->ATHB12                  <-------GAMYB            --------------->AtSPL8 ---WOX13(1)           <---------YAB1              <---------YAB1               <---------YAB1   atttcgttttgaagaaactctgaatatgataggaaatcaaaattcacagagttttcattcagttgggttttctctgaatttcatcaatgtacttctttct  15935700                                                          ----------->GT1                    --------->AHL20(2)                   <-------TEIL                    <---------AHL20(2)                  --------->ARR14(1)             <---------YAB1             >>>>>>>>>>WRKY26                          <---------GLK1(2)         <---------TOE1(2)      --------->TOE2(3)  --------->ARR11(3)            --------->ARR14(2)     <---------ANAC58      <----------DOF2   --------->CCA1(1)  <---------At4g35610                <---------ANAC55(1)   <---------AHL20(2)   --------->RVE1(1)  --------->At4g35610 ---------->DOF2<---------ANAC58 --DOF2  --------->MYB52(2)      <----------DOF2       <---------ARR14(2)     <---------ANAC46   tacatttactttagttgatcaaataaatatccagtctttgacaatagctgattttcagattcgataaaagacttcaaatttcgtgtgttttgattcttct  15935800                             <---------ANAC58                             <---------ANAC58                             <---------ANAC46                            <---------DEAR3(1)                            --------->ALFIN1                            <---------AtMYB61                           --------->ALFIN1                           <---------ABI4(1)                         --------->ALFIN1                         --------->ATERF1(1)                 <----------DOF2      --------->ARR11(3)            --------->At4g35610--------->ALFIN1            <---------At4g35610<---------ANAC46            <---------ZAT2--------->ALFIN1                                  --------->ATHB12           ------->TEIL --------->ALFIN1 --------->DAG2                    <---------YAB1       ------->TEIL    --------->ALFIN1 ---------->DOF2         <----------DOF2          ----------->GT1   cttgttatggacgtagctgatttaggggggggggtgtgaagataaagtttcgatttctattcatgtctttttggattttgatttgaatttgaagttaaac  15935900  Previous    Next  AGI:  At4g33030.1    Description:  SQD1 (sulfoquinovosyldiacylglycerol 1); UDPsulfoquinovose synthase. Identical to UDP-sulfoquinovose synthase, chloroplast precursor (SQD1) [Arabidopsis Thaliana] (GB:O48917); similar to UDP-sulfoquinovose synthase, chloroplast precursor (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1) (GB:Q84KI6); similar to hypothetical protein OsI_019116 [Oryza sativa (indica cultivar-group)] (GB:EAY97883.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43818.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 15935419    to: 15937810    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version