Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->At5g28300                                                <------MYB46(1)   --------->MYB46(3)                                                <------MYB83   <---------WRKY12                                     <---------CCA1(2)     ----------->GT1                                     ---------->ID1       --------->DAG2                                 ------>ZmHOX2a(2)  <----------DOF2   ----------->GT1  <----------DOF2         ----------->GT1       <---------ARR11(3)--------->ARR11(3)   <---------DEAR3(2)       ---------->DOF2         --------->ARR11(3)<---------ARR11(3)------->GAMYB    <-----------GT1 -------->GT1        --------->At4g35610       --------->MYB59<-------TEIL         <-----------GT1   gtgtaaatagaaagtgatttatgagcttagtatgatcttgtctcttaattaggtctttaaaaggttcaacgacggtacaaaaattttaactttcttctgc  15868200                                                    --------->DAG2                                          <------ZmHOX2a(1)                                        <---------TOE1(3)                     --------->At5g28300                                        <---------TOE2(3)                     --------->LBD16                                    <----------DOF2---------->DOF2           <---------ANAC46                                  <---------------AGL15                      ----------->GT1           --------->TOE2(3)     <-----------------AG                        --------->TOE2(3)           --------->TOE1(2)     <-----------------AGL1            <---------YAB1           --------->TOE2(2)  <---------GLK1(2)<----------ID1  <---------GLK1(2)    --------->ARR11(3)  --------->ATHB12         --------->AHL20(2)---------->DOF2   <---------ARR14(2)   <---------ARR11(3)  <---------AHL20(2)  <-------TEIL--------------->AGL15        --------->ARR14(2)   <---------AHL20(1) <---------YAB1 ---------->DOF2  <-----------------AGL2       <------ZmHOX2a(1)     --------->AHL20(1)   atatttattggaacctaagaaagatgcaaaaaaattctctttaaggaaaaagaaaaagaggggaggattcttatagataccgtaaaaatatttgtttttg  15868300                           --------->CCA1(2)                          <---------ARR14(2)                                      <----------DOF2                          --------->ARR11(3)                                 <---------HSFB2a(1)                  ---------->DOF2                                            <---------HSFC1(2)               --------->ANAC58       <---------ANAC58               <---------At4g35610               --------->ANAC58       <---------ANAC58               --------->At4g35610           <---------HSFB2a(2)      --------->GLK1(2) <---------ARR14(2)     --------->HSFB2a(1)           --------->HSFB2a(2)  <------ZmHOX2a(1)     --------->ARR14(2)     --------->HSFC1(2)  <---          <---------LBD16 <---------ARR11(3)      --------->At5g28300----------->RAV1(2)         ----   atcacgctggtctctggaagcaaaggaagatataggagtttcttgctcttgctgtgaattctcacaaacccatctgagaaatttctttctctatctccaa  15868400                                 <---------LBD16                                  --------->TOE1(3)    <----------DOF2      <-----------GT1                <---------------AGL15     --------->TOE2(3) ------ARR14(2)       ----------->GT1        --------->At5g28300            <-------TEIL    <-------- ----->ARR14(2)  <---------MYB46(3)      --------->MYB52(1)                --------->CCA1(2)---------   atccctctttctctctcagtggatgagtaacttccttcggaaaaaacggtgaagcatgcttcaatgggaactacaagattcaaacctcagactctgctac  15868500                                                     --------->CCA1(2)     <---------GLK1(1)                                                     <------ZmHOX2a(2)     --------->CCA1(2)                                                    --------->AGP1        <---------GLK1(2)                                                    --------->ARR11(3)    <---------ARR11(3)        <----------DOF2                <---------CCA1(2)                  --------->ARR11(1)        <---------DAG2             <---------ANAC58 <---------ARR14(2)    --------->ARR11(3)     <---------ALFIN1     ------>ZmHOX2a(1)         --------->ARR14(2)    <---------ARR14(2)    --------->MYB46(3)    ==================================HOX2a_HOX2a   --------->ARR14(2)  <-----------GT1     ----------------------->TaNAC69(2)                ----------->ARR10       ----- -At4g35610     ------>ZmHOX2a(1)  <---------ANAC58 <---------ARR11(3)  --------->ICU4----------->GT1 >At4g35610    --------->TOE2(3)   --------->ANAC55(2)         --------->REM1(2)  <---------ARR14(2)   agttcaaccactttcttccttactcttcctctctcttacttatctctctagatagatccacaacgtgaagagtcaagatttgcgaaacttgtatataaga  15868600                                             <---------DAG2                                             <----------DOF2                                         --------->ZAT18                                      <---------ANAC58                                      <------MYB46(1)            <---------YAB1                                      <---------ANAC58         <---------------AGL15                                      <------MYB83             <---------AHL20(2)                                     --------->MYB55(2)       <---------YAB1                                     --------->MYB111(2)    <---------ICU4      <---------AHL20(2)                                     <---------DEAR3(1)    --------->ICU4      <---------ATHB12                             *TSS    <---------MYB46(3) <---------AHL20(2)     --------->AHL20(2)                       <----------DOF2<---------ANAC46  <---------YAB1 <------ZmHOX2a(1) ---->ARR11(3)    ---------->DOF2   --------->ALFIN1  --------->YAB1 <---------TOE2(3)     <---------ANAC46   tttgtagtgggatgagagagaaaagctttagtttatgggtgggtgtgctttttgttttataatttttattttaggaaactaataaatagaaatgtgtgta  15868700                             <---------DEAR3(1)                         --------->ETT(1)                         <---------ANAC58                 --------->TOE2(3)  <---------ALFIN1                         <---------ANAC58                 --------->TOE1(3)  --------->AtMYB61                      --------->ALFIN1                 --------->ZAT18    --------->AtMYB61                      <-----------RAV1(1)          <---------------AtSPL8 ------->GAMYB                    --------->ALFIN1           <-----------------------TaNAC69(2)      <----------DOF2                   ------->MYC3       ---------->DOF2  <---------ZAT18   --------->MYB46(3)                   <-------MYC3 --------->ALFIN1   --------------->AtSPL8<---------MYB55(2)        <-         ---------->DOF2 <---------ANAC46     <---------ZAT14  <-----------GT1         <---------DAG2   tgaaaaaaaaaaaaagagacatgtgtgtcgggctgtgttgaaaaggagagaagtgagtacccttaataccagacaaccaccacttctcactttttctcat  15868800                                                           <-------TEIL               <---------AHL20(2)                        <---------ARR14(2)                   -------               <---------YAB1                            --------->ARR14(2)            <---------YAB1              <---------AHL20(2)              <----------DOF2                ---------->DOF2  -------     <-----------GT1           --------->ALFIN1   <---------At5g28300    <----------DOF2--------->YAB1 ---------DOF2--------->AHL20(2)          <---------MYB52(1)     <-----------GT1    --------->ICU4   tcttttttttcttcattttaattcaattttgaagtgtttcttctgttacttttactgcaaattcgtttagccttcctttcaaagtcactatgagaaacgc  15868900     <-----------TGA1     <-----------HVH21    --------->ANAC55(2)    <---------ANAC55(2)    --------->ANAC58    --------->ANAC46    --------->ANAC55(1)    --------->ANAC58   <-------TEIL   <-----------STF1                                                                  <---------ICU4 <---------ARR14(2)                                                               --------->YAB1 --------->ARR14(2)                                         <----------DOF2      <-------TEIL -->ANAC58                                         --------->TOE2(3)       --------->At5g28300 -->ANAC58               <-----------GT1           --------->TOE1(3)      ----------->GT1  <---------AtLEC2   acaaatacgtcacatcaacatcatatataacaaaacaagtattgaattcaaaaccttaattcctttgttttcagtatggtaaattcataattttcatggc  15869000                                                                   --------->RAP2.3(3)                                                                  <------NtERF2                                                                 --------->ABI4(1)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2                                                                <---------ATERF1(1)                                                                <---------ALFIN1                                                                --------->RAP2.3(2)                                                                --------->ATERF1(2)                                                                --------->RRTF1(3)                                                                --------->RAP2.3(3)                                                                --------->RAP2.6(2)                                                                <---------ATERF1(2)                                                                --------->RRTF1(2)                                                                --------->DEAR3(1)                                                               --------->ATERF1(1)                                                               --------->RRTF1(1)                                                               --------->RAP2.6(1)                                                               --------->ORA47(2)                                                               --------->DEAR3(2)                                                               --------->RAP2.3(1)                                                               --------->DEAR4(2)                                                               --------->ERF1                                                               <------NtERF2                                                              <---------ATERF1(1)                                                              <---------ORA47(2)                                                              <---------RAP2.3(1)                                                              ------>NtERF2                                                              <---------RAP2.6(1)                                                              <---------ERF1                                                              <---------DEAR4(2)                                                              <---------RRTF1(1)                                                             <---------RAP2.3(3)                                                             <---------DEAR3(1)                                                             --------->DEAR3(1)                                                             <---------RAP2.3(2)                                                            --------->ATERF1(1)                                                            --------->RAP2.3(1)                                                           <---------ATERF1(1)                                                         =========================RAV                                                         --------->ATERF1(1)                                                         <-----------RAV1(2)                                                        --------->ZAT2               --------->ANAC46                                                        <------NtERF2    --------->ARR11(3)                                                        <---------At4g35610   <---------ICU4        -                                                        <---------ZAT2----------->RAV1(1)           -                                                        --------->At4g35610 <----------DOF2         <                        <----------DOF2          ====================RAV <---------ARR11(3)        --               --------->YAB1                    <-----------RAV1(1)  <---------ALFIN1  <---------GLK1(2)           ------>ZmHOX2a(1)                    ------->TEIL<---------ABI4(2)<---------YAB1 ---------   tattagtttgctccttattagaacttcttttgcccttctaatccaatgtgtatgtggcagcaggcgccgccccaacatctttattacacagaattggata  15869100  Previous    Next  AGI:  At4g32880.1    Description:  ATHB-8 (HOMEOBOX GENE 8); DNA binding / transcription factor. similar to ATHB-15 (INCURVATA 4) [Arabidopsis thaliana] (TAIR:AT1G52150.3); similar to ATHB-15 (INCURVATA 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G52150.1); similar to ATHB-15 (INCURVATA 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G52150.2); similar to class III HD-Zip protein 8 [Populus trichocarpa] (GB:AAX19057.1); similar to class III HD-Zip protein 7 [Populus trichocarpa] (GB:AAX19056.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61201.1); contains InterPro domain MEKHLA (InterPro:IPR013978); contains Inter Range:  from: 15863456    to: 15868629    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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