Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->CCA1(2)     <----------ID1 ---------->DOF2                              --------->ANAC46 --->ZmHOX2a(2)                          ------>ZmHOX2a(2) ---ZmHOX2a(2)                          --------->CCA1(2) ---->ARR14(2)                          <------ZmHOX2a(2) -->TEIL                               --------->ARR14(2) -----ARR14(2)                         <---------ARR14(2) --TOE2(3)                             --------->ARR11(3)       <----------ID1              --------- ---AGL2                               --------->AGP1           ----------->GT1        <----------ID1 -->AGL2                               <---------ARR11(3)       --------->ANAC58      ----------->GT1 ---AGL3                             ----------->ARR10  ----------->GT1    --------->YAB1  ---------- -->AGL3                   --------->GLK1(1)<---------ALFIN1    --------->ANAC58 --------->AHL20(2)--   tccaaaagagacgagatttagaaacagagaaatctagatgagatctacacatcaaaaattgtaagaacgaaaaacaataacaaaaaaatgggaaaaaggg  15646300                                                                            <---------RAP2.6(3)                                                                            ------>NtERF2                                                                           --------->ATERF1(2)                                                                           --------->RAP2.6(2)                                                                           --------->ANAC46                                                                           <---------ATERF1(2)                                                                          --------->RAP2.6(3)                                                                        ------>MYB46(1)             -                                                                        --------->ANAC46            -                                                                        ------>MYB83                -                                                                    --------->ANAC58                -                                                                    -------->P                      <                                                                  <---------MYB111(2)               -                                                                 <---------At4g35610                -                                                                --------->ANAC58                    -                                                                --------->ANAC58                   <-                                                              ------>ZmHOX2a(2)                    --                                                             <------ZmHOX2a(2)                     --                                          <---------ZAT2    --------->ARR11(3)                    ---                                  ================================HOX2a_HOX2a                     ---                                  --------------->AtSPL3    <---------ARR14(2)                   ----                                  ------>ZmHOX2a(2)         --------->ARR14(2)<---------ALFIN1  <----             ------>NtERF2       <------ZmHOX2a(2)         <------ZmHOX2a(1)--------->LBD16     -----             --------->LBD16     =================================HOX2a_HOX2a<------NtERF2      -----            --------->ANAC58    --------->ARR14(2)        <------MYB46(1)--------->ZAT2         <----            --------->ANAC58    <---------ARR14(2)        <------MYB83------->GAMYB            <-----            --------->ANAC46  <---------DEAR3(2)       <---------MYB52(1)<---------ZAT2        <-----     --------->DEAR3(2)<-------TEIL       --------->ZAT2<--------P--------->MYB46(3)           ------ >DAG2     <---------LBD16 <-----------HVH21          --------->LBD16--------->MYB46(3)        ------ >DOF2    <---------ATERF1(1)--------->ETT(1)  <---------CCA1(2)--------->ANAC46              ------- ------->At4g35610   <---------GLK1(2)--------->SPL7<---------LBD16 --------->ANAC58          -------   aagatgaacagaccccgccatcagattcatgtcggatccgaacgagctcgtttctccggtaggatccagcaaccaagccggcactggcctccatcgcagc  15646400   <---------ALFIN1 ----------->RAV1(1) -------->At1g77200 -------->DEAR4(1) -------->DEAR3(1) -------->ANAC46 ---------ETT(1) ------>GAMYB -------->DREB2C(2) ---------->HVH21 -----NtERF2 ------->MYB46(3) ------->DEAR3(2) ------>MYB52(1) --->NtERF2 ----->DEAR3(1) -----ABI4(2) ---->ATERF1(1)                                                                           <---------- ---->MYB46(3)                                  <-------TEIL                              ----------- -----MYB55(2)                               <---------HSFB2a(1)        --------->HSFB2a(2)       <-- ----At4g35610                               <---------GLK1(1)          <---------HSFB2a(2)   ------- ----ATERF1(1)                     --------------->AGL15         --------->ANAC58   --------->ARR14(2) >NtERF2                           <---------------AGL15         --------->ANAC46   <---------ARR14(2) --->At4g35610                     ================================================================== -->ANAC46              <-------TEIL         --------->GLK1(1)   --------->ANAC58   <---------ARR11(1) -->DEAR3(1)---------->DOF2       ----------------->AGL1        --------->RAP2.6(3)<---------CCA1(2)   caccgacacacagagaaagagagagattcacaaaattcaaaattgggaaattcgtagccgattcaatacggcatctcgaaaacccaaatctactaaaaaa  15646500        <---------ALFIN1 -----AGL15                                    <---------At4g35610 ---->AGL15   ------>ZmHOX2a(1)                <---------ZAT2                   <---------AHL20(2) ----ZmHOX2a(1)                         <---------ARR11(3)     <---------ARR14(2)             <------ --->DOF2 --------->ANAC46              --------->ARR11(3)     --------->ARR14(2)             <------ =====MADS_MADS  <-----------HVH21     <---------GLK1(1)<<<<<<<<<TBF1<----------DOF2        <--------   ggatgttcacacactcctctgtcactctctctctctatttgatatctcaagctgcttcttcttcaaatctgcttttgcctattttatcgcagagtgatgt  15646600                                                                                         <---------ZAT2                                    <---------LBD16                                      --------->ZAT2                                   <---------At5g28300                                   --------->At4g35610                         <-------TEIL                                               <---------At4g35610                      --------->ANAC58                                              --------->At4g35610    --------->TOE2(3) --------->ANAC58--------->LBD16                     <---------ALFIN1  <-----------GT1    <---------------AtSPL8                              <---------MYB55(2) ---ANAC46           --------------->AtSPL8   ----------->HVH21          --------->MYB46(3) <-------- ---bZIP60(2)<---------AHL20(2)   <-----------GT1                      *TSS    ---------------------- -ZAT14      --------->AHL20(2)<---------YAB1 ----------->TGA1       ------>ZmHOX2a(1)   <---------At4g35610   gttttttcttaatttttaaatgacaagtacattattttaccggagatggtgacggtagtagtagcctcttcctctcccaccgttttagctcagctcggct  15646700                                                                                               ------                                                                                             <-------                                                                                    <---------ANAC55(2)                                                                                    --------->TGA1a                                                                                    <---------bZIP60(1)                                                                                    --------->O2                                                                                    <---------TGA1a                                                                                    <---------ANAC55(1)                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                                    <---------bZIP60(2)                                                                     <---------GLK1(2)       <-------                                                                    <---------At4g35610      --------                                                                    --------->ZAT2  <---------O2<----                                                                    --------->At4g35610      --------                                                                    <---------ZAT2  --------->bZIP60(1)                                          --------->ARR14(2)       ------>NtERF2    --------->ANAC55(2)                          --------------->AGL15       <---------ALFIN1              >>>>>>>>>>HY5                          <----------DOF2 <---------MYB52(1)      <-----------RAV1(2)  ----------->GT1                 --------->At4g35610      <---------ARR14(2)   --------->ANAC58     =================    --------->At4g35610   <---------------AGL15 <---------ANAC58 <------NtERF2      <---------ANAC58    <---------At4g35610   <---------DAG2 <---------RAP2.6(3)   --------->ANAC58    ----------->STF1 -DEAR3(1)     --------->YAB1         <---------At4g35610      --------->ANAC46  ----------->HVH21 ->TaNAC69(2) <---------YAB1   ---------->DOF2  <---------ANAC58------>NtERF2    ----------->TGA1   ctattcggctcaagttatcatctctctactttttaaagtgagccgttctggcttccccactagacgcgccagcttcttagtatgtgacgtggcaaaatct  15646800      ---------->DOF2                 <---------AHL20(2)    --------->ANAC58                  <---------AHL20(1)               <-----------RAV1(1)    --------->ANAC58       >>>>>>>>>ARR2                          <-------MYC3 --->TOE2(3)               >>>>>>>>>ARR1   <---------AHL20(2)     ------->MYC3 --ARR11(3)               --------->ATHB12 --------->AHL20(2)    --------->O2 ----ARR10      <------ZmHOX2a(1)     --------->AHL20(2)         <---------O2 ->ARR11(3)    <----------ID1         --------->AHL20(1)    --------->ANAC58 -----YAB1   --------->CCA1(2)       --------->AHL20(2)     --------->ANAC58            ------>MYB83< ->GLK1(2) --------->CCA1(2)<---------WOX13(1)      ---------->DOF2    <---------MYB46(3)       <---- ================bZIP_DOF<---------YAB1<---------YAB1       --------->ANAC46            ------>MYB46(1)   tattgcaagaaagagataggacaaagtatgattgtttgattatattaaaaaaaaaaaagaagaagccacgttgttgttggctctggtaccagcctgttct  15646900                      --------->ZAT14                      <---------ZAT14                      --------->ABI4(2)                      <---------ZAT18                    <-------GAMYB                   <---------MYB46(3)                  <---------DEAR4(1)                  <---------DEAR3(1)                                       <---------ANAC55(2)                  <---------MYB46(3)                                       <---------ANAC58       <--                  <---------DREB2C(2)                                      <---------ANAC46       ---                <-----------HVH21                                          <---------ANAC58   -------               ----------->HVH21                <------MYB83             --------->MYB52(1) ---------               <-----------RAV1(1)              <------MYB46(1)          --------->CCA1(2) <---------ATHB12             ----------->RAV1(2)               --------->MYB59          <---------ARR14(2) --------->AHL20(2)             <---------ANAC55(2)           --------->ATHB12   --------->At4g35610          <---------AHL20(2) <---------AHL20(2)<---------DEAR3(2)     --------->ICU4      <---------At4g35610 <---------ARR14(2) ---------AHL20(2)<---------At1g77200     <---------YAB1   <---------MYB52(1)     --------->ARR14(2) ------DOF2  --------->At4g35610       <---------ZAT6<---------YAB1     --------->ARR14(2) <---------ATHB51   tttttatttgctatcacctgtcggtggactcaaaataactagtgttgattaggttctaattgttagcttaagaagttacgggcgaattcgcaaataattt  15647000                                                                     --------->GLK1(1)                                                                     <---------GLK1(1)                                                                    <---------GLK1(2)                                                              --------->ARR14(2) -------AHL20(2)                                              --------->ZAT14 ------>AHL20(2)                            <-----------GT1   <---------ARR14(2) -->ICU4                                <---------YAB1        <---------ZAT14       <---------AHL20(2) >AHL20(2)     <----------DOF2    ---------->ID1     <---------AHL20(2)         <---------AHL20(2)   ttaaatggatgccacttctttttttaatcccattttgttgttatatttacaagttttaattcagtatacagatttctgagttttaattcattttttgtgt  15647100                                         <---------TOE2(3)              <---------DEAR3(1)                                        <-----------GT1              ----------->TGA1                                       <-----------GT1             --------->YAB1       <---------YAB1                                      --------->AHL20(2)           <---------ICU4     --------->CCA1(2)                                 --------->ICU4                   --------->ICU4   <---------ZAT6                                 <---------ATHB12              <---------ZAT6    ----------->GT1                --------->AHL20(2)<---------ICU4         <---------ZAT6 <---------DREB2C(2)         <-----------GT1    <---------TOE2(3) --------->AHL20(2)--------->YAB1 <---------ZAT14   caataaacttttaacaaaaaaaattccattaagaaatcattttaacatttttatatttagtgatagtgataatgacggtggtatagtgatatgatatata  15647200  Previous    Next  AGI:  At4g32410.1    Description:  CESA1 (CELLULOSE SYNTHASE 1); transferase, transferring glycosyl groups. Identical to Cellulose synthase A catalytic subunit 1 [UDP-forming] (CESA1) [Arabidopsis Thaliana] (GB:O48946); similar to CESA10 (CELLULOSE SYNTHASE 10), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G25540.1); similar to IRX3 (IRREGULAR XYLEM 3, MURUS 10), cellulose synthase [Arabidopsis thaliana] (TAIR:AT5G17420.1); similar to CESA3 (CELLULOSE SYNTHASE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05170.1); similar to cellulose synthase [Populus tremuloides] (GB:AAO25536.1); similar to c Range:  from: 15640626    to: 15646671    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version