Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ICU4                                                  <---------YAB1         <---------MYB46(3)   ----------->GT1                              --------->YAB1           ----------->GT1 ------>AHL20(2)                          <----------DOF2     <---------ARR11(3)                 <--- -------AHL20(2)                         <---------ANAC58     <---------GLK1(2)                <----- ----DOF2                                <---------ANAC58     --------->ARR14(2)              ------- ---DAG2                               <---------YAB1         <---------ARR14(2)         --------->ANAC46 --GT1    --------->ANAC46       <---------YAB1<---------YAB1<------ZmHOX2a(1)      <---------GLK1(1)   ttaaatcgataaacacaacaagttttcttcttgctctaattgtgcttgtatgattatggaacaggatactctcggtggataaatcgatttcccaccatta  15500700             --------->ZAT18           <-----------RAV1(2) ------YAB1  <---------ZAT18      <------MYB83                 ----------->GT1 ----ICU4<---------MYB52(1)       <------MYB46(1) <---------LBD16        ----------->GT1           <- -->ICU4<-------GAMYB            --------->MYB59 <---------ANAC46     ---------->DOF2          ------   tgaaacatcccgttgtgcaatagaaactattagatttggtctcaggctgtttcgagggagagaaatagtcaaaaaaggaaattttgttcagtttattagc  15500800                                                                              --------->ARR14(1)                                                                              --------->CCA1(2)                                                                             --------->ARR14(2)                                                               <---------ALFIN1                                                               --------->ANAC46<-------TEIL                                                              --------->MYB46(3)           <---------CCA1(1)            --------->AHL20(2)                           <---------ANAC58    <---------ARR14(2)  ------->MYC3                                           <---------ANAC58  ----------->ARR10  <-------MYC3                                         <---------YAB1  --------->CCA1(2)   <---------RVE1(1) --------->ANAC46             <---------YAB1         --------->YAB1 --------->ANAC58      <---------ARR11(3) --------ALFIN1              <---------AHL20(2)     <---------YAB1  --------->ANAC58      --------->ARR11(3) --->At4g35610              --------->YAB1        --------->YAB1------>NtERF2--------->ARR11(1)   tccacgttgttgtattatatacacttgagattataattcatggtttctctatttatgatgcttccccaccaagaaatgagatacgatatatagatattta  15500900                                                                                    <---------ANAC46                                                                                   <------NtERF2                                                <---------ARR14(2)                ------>NtERF2                                                --------->ARR14(2)               --------->ANAC46                                             <---------TOE2(3)                   <---------DEAR3(1)                                             --------->DAG2          --------->ARR11(3)                                             <---------TOE1(3)       <---------ARR11(1)                                           --------->CCA1(2)  <------ZmHOX2a(1)  --------->DEAR3(1)                 ----------->GT1      ---------->DOF2       <---------TOE2(3) --------->ANAC46               <---------ANAC58  <---------ARR14(2)      <---------YAB1     <-----------GT1        --               <---------ANAC58  --------->GLK1(2) <---------YAB1   <---------CCA1(2)    <-----------GT1   tgcaagtctaaaatttgacttgttatatagaggcaaatctaaaagataaggttccgattatgaaggattcaaatctttaaacgacgccgtgtttccatat  15501000                                 <------MYB46(1)                                 <------MYB83                                 ----------->GT1                               <--------P                              <---------ANAC58                              <-------GAMYB                                  <-------GAMYB                             <------MYB46(1)                                --------->MYB52(2)                             <------MYB83                                   <---------MYB46(3)                             <---------DEAR3(2)                             --------->MYB111(1)                             --------->MYB55(2)                           <--------P                             --------->MYB52(2)                         <---------HSFB2a(1)                             <---------MYB46(3)                         ----------->GT1                            <---------AtMYB61                           <------MYB46(1)                            <---------TOE1(2)                 --------->TOE1(3)                            <---------TOE2(2)        --------->AHL20(2) <------MYB83       --------->TOE1(2)            --------->MYB46(3)<---------ANAC46   --------->AHL20(2)  <------ZmHOX2a(1)     --------->TOE2(2)            <---------MYB52(2)<---------ANAC58   ----------->TBP   <---------TOE2(3)     --------->ARR14(2)   <---------ZAT14         <---------MYB52(1)    <---------YAB1    <---------TOE1(3)     <---------ARR14(2)   --------->ZAT14        <-------GAMYB       ------>ZmHOX2a(1)<----------DOF2           --------->GLK1(2) ------->ZAT6        <----------DOF2       ------>ZmHOX2a(1)  --------->TOE2(3)     *TSS<---------GLK1(2)   aacagtaaacagaaacaaacgcgtttttcgttggttggataaatcctccttataaataaacaaacctttaaggaaggttagttgtcaaaagaatctgcga  15501100                                                                                            ---------                                                                                           <---------ICU4                                                                                           --------->HSFB2a(1)                                                                                          <---------ATHB12                                                                                          <------ZmHOX2a(2)                                                                                          ===========                                                                                      -------->ZAP1                                                                                    <---------WRKY18(1)                                                                                   --------->WRKY38(1)                                                                                   --------->WRKY12                                                                                   ----------->HVH21                                                                                   --------->WRKY45                                          ------>NtERF2                           <---------MYB52(1)                                         --------->ANAC46                        <---------At4g35610                                         --------->ANAC58                        <-------GAMYB                                         --------->ANAC58                        --------->At4g35610                                   <---------ICU4                               --------->MYB52(2)                                --------->YAB1         --------->ZAT14          <---------MYB46(3)                           <------ZmHOX2a(2)  <---------CCA1(2)                --------->SPL7                          <---------ARR11(3)<----------DOF2                   <---------MYB52(1)                          --------->ARR11(3)<---------DAG2  <------ZmHOX2a(2)<-----------HVH21                         <------ZmHOX2a(1)<------NtERF2<---------ZAT14       <---------SPL7<---------KAN4(1)   aaaataagagagagagagagagaaacaggatcattcattatgcccgccttatctcactacagatcagtatcatctctaccgtccgttgaccgatcattcc  15501200                                                                                   <-------TEIL                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 <---------ARR14(2)                                                                                 <---------ARR11(3)                                                                                 --------->ARR14(2)                                                                                 --------->AGP1                           <---------ZAT2                                       --------->GLK1(1)                           --------->At4g35610                                  <---------GLK1(1)                      --------->ANAC58                                          --------->At4g35610                      --------->ANAC58                                          <---------At4g35610                      --------->bZIP60(2)                                      ----------->ARR10                     <---------LBD16                                          <------NtERF2  --------                    <---------ALFIN1                                         ------>NtERF2   <-------                   ------>ZmHOX2a(2)                   ==================================HOX2a_HOX2a                  <------ZmHOX2a(2)                    ===================================HOX2a_HOX2a                 <---------ARR11(3)                    ------>ZmHOX2a(1)    --------->DEAR3(1)                 --------->ARR14(2)           ------->TEIL                 --------->RAP2.3(1) ------                 <---------ARR14(2)           <---------ARR14(2)          ------>NtERF2      <-------                <------ZmHOX2a(1)             <-----------ARR10           --------->LBD16  <---------        --------->MYB46(3) <---------At4g35610--------->ARR14(2)          <---------ATERF1(1)--------      --------->MYB52(1)   <------NtERF2     <---------GLK1(2)           <---------DEAR3(1)<---------    --------->MYB46(3)--------->ANAC46       <---------CCA1(2)           --------->ANAC46 <---------- >KAN4(2)    <-----------RAV1(2)          --------->LBD16               <---------LBD16   <---------ANAC46 ======================HOX2a_HOX2a       ----------->RAV1(2)<---------ANAC46<---------ANAC46---------   ttctcatccaacgactcaggatccacggcagctcttcttccttccctgaatcttctccttctgcgtctattctctccggcgcagatccgttgaagtgtac  15501300                                                   <---------DAG2                                                   <----------DOF2                                                 --------->LBD16                                                 ------>NtERF2           ------>ZmHOX2a(2)                   ------>ZmHOX2a(2)          --------->GLK1(1)                    =================================HOX2a_HOX2a          <---------GLK1(1)             <---------ZAT2         --------->ARR14(2)             --------->ZAT2   <-----------RAV1(1)                  --------->At4g35610 ->ZAT14 <---------ARR14(2)             ----------->RAV1(2) --SPL7<---------MYB46(3)               <---------At4g35610 --->SPL7<---------ARR11(3)        --------->GLK1(1) --ZAT14 --------->ARR11(3)        <---------GLK1(1)      <---------GLK1(1) ------AtSPL3                  --------->LBD16 --------->ATERF1(1)                  <---------YAB1 ->ZAT18 <---------AGP1       <---------LBD16 <------ZmHOX2a(2)                   <---------At4g35610 ------AtSPL8                <---------LBD16  ==================================HOX2a_HOX2a --------SPL14            <------ZmHOX2a(2)  <---------ARR14(2)               --------->ARR14(2) >ALFIN1<---------CCA1(2)<-----------HVH21   --------->ARR14(2)          ------>ZmHOX2a(1)   ggtctctggtggatctcttgctaaatggatcaccgggatttcagctggatccgccttagggtttctctattggtcctctggttcttctgattccatctct  15501400                  --------->AHL20(1)                  <---------AHL20(1)                  <---------AHL20(2)      <---------ANAC46      <---------ANAC58      <------MYB46(1)                                                                   ------>ZmHOX2a(2)      <---------ANAC58                                              <---------DREB2C(2) ----------->GT1      <------MYB83--------->AHL20(2)                                <---------DEAR3(1) <------ZmHOX2a(2)     <---------MYB46(3)                                        ---------->DOF2        <---------ARR11(3)     --------->MYB55(2)                                    ----------->GT1--------->At4g35610     <---------AtMYB61                     --------->ANAC46<---------ANAC46------>ZmHOX2a(2)     --------->MYB111(1)                <---------WRKY12   <---------ZAT6 <------ZmHOX2a(2)     --------->MYB111(2)        ----------->HVH21        <---------ANAC46<---------ARR14(2)       ---     --------->MYB46(2)       <---------At4g35610   <---------MYB52(1)<------NtERF2   --------->ARR11(3) --------->MYB52(2)        ------>ZmHOX2a(1)     <-----------------AGL2  --------->ARR14(2)  --------   ggtttgtttggtgggagtaatttattgtccttcgctgatagttcaacgccttctgtttgtggtgtaaaagtcggcgatctgaaaccgagatcgtttattc  15501500                                                  --------->ARR11(3)                                                  <---------ARR11(3)                                              <------MYB83                                              <------MYB46(1)                                             --------->MYB46(2)                                             --------->MYB52(2)                                             <---------MYB46(3)                                             <---------DEAR3(1)                                            <-------TEIL                                           <---------ARR14(2)                                         <---------MYB46(3)                    <---------GLK1(2)                                         <---------HSFB2a(1)                <---------WOX13(1)           <---------ANAC46              --------->HSFB2a(1)              --------->ATHB12           <---------ANAC58              --------->HSFC1(2)         <---------AHL20(2)           <---------AtLEC2         <---------LBD16 ------>ZmHOX2a(2)    <---------AHL20(2)       <-------GAMYB --------->At4g35610 <---------HSFC1(2)         --------->AHL20(2)      <---------MYB46(3)<---------LBD16 <---------TOE2(2)         <----------DOF2 ------>LBD16        <---------At4g35610<---------TOE1(2)      <---------MYB52(1)    <---------MYB52(1) ->KAN4(2) <---------ANAC58   <-------TEIL<---------SPL7 <<<<<<<<<TBF1   <---------YAB1   cgaaattgtcgttgcctggttacagctctggattcatcttcggaggttcggtgatcttcttcttcgttctttaatttcattgattctgttttttctctca  15501600  Previous    Next  AGI:  At4g32050.1    Description:  neurochondrin family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO44301.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Neurochondrin (InterPro:IPR008709) Range:  from: 15496543    to: 15500853    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g32060.1    Description:  calcium-binding EF hand family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO44313.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 15501084    to: 15503599    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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