Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->TOE2(3)                        --------->ANAC46          --------->AHL20(2)          <---------ICU4                                 --------->ANAC46                 <---------AHL20(2)      --------->AHL20(2)                             --------->YAB1       <---------ANAC55(2) <------      <---------AHL20(2)       <----------DOF2      <---------YAB1 <---------GLK1(2)   <----------DOF2    <----------DOF2 <-----------GT1                 <---------ATHB12      --------->ANAC55(2) -------   tctggcctttaattttgacaaattacctttgaacttttgaatttggagattgtaatcatacatcacacagaatatcacatatttgaatacttttaatttt  15487600                                                                           ---------->DOF2           <------ZmHOX2a(1)              --------->YAB1              ---------->DOF2         ------- ---AHL20(2)             ---------->DOF2<---------WOX13(1)         --------->AHL20(2) <---------GLK1(2) -->AHL20(2)   ----------->GT1   <---------YAB1               XXXXXXXXXXXXXXXXXXXX>MIR854A-E---------   ttgaaatggtataggaaatgaaaaatgtaaagcttcttattgaatgataacacacatatgtgatgagaataaaaaagaaaagaatacagaatttatgtga  15487700                                                             --------->DAG2                                                            ---------->DOF2                                                         --------->AHL20(2)                                                         --------->YAB1                                                   --------->ANAC58                                                   ----------->GT1                                                   --------->ANAC58  <----------ID1                                              --------->ANAC58       ----------->GT1                --------->TOE2(3)             --------->ANAC58----------->GT1  --------->ARR11(3)                  <---------TOE2(3) --------->ICU4  <---------ARR11(3)                 <-----------GT1    <---------YAB1 <---------CCA1(2)          ------>ZmHOX2a(2) <---------TOE2(3)     <---------TOE2(3)    --------->DAG2 ---->HVH21     --------->YAB1     <---------WOX13(1)--------->AHL20(2)------------------------>ANAC81 >ANAC55(2)    --------->MYB46(3)--------->ATHB12---------->DOF2  ---------->DOF2       ---------->DOF2   catatatcttattcacaaccatagtattgatccattgattaacatatcaaggaaagtaattataaagttaaaggaaaaaaaaaaaaaaaaaaaagctaaa  15487800                                     <---------ZAT18                                     --------->ZAT18                                <---------ZAT14                                --------->REM1(2)                               --------->ALFIN1                              ------->MYC2                              <-------MYC2                              <-------MYC3                              ------->MYC3                    <---------MYB52(1)                             <---------ANAC58                <-------GAMYB                         --                             <---------ANAC46               <---------DEAR3(2)                   ----                             <---------ANAC58               <------MYB83                       <-----                        ---------->CDC5                     <---------MYB46(3)               --------                      <---------MYB52(2)                    <------MYB46(1)                  --------        ---------->DOF2---------->DOF2                      ----------->GT1    <---------At4g35610 --   caaaaaacaaaaaaggaagagacaactaagcgcgtgtagttcacaaaccagaagccgagagtcggttaagaaaccgtcttaagctgttcttggacacgct  15487900       <---------AHL20(2)      <---------AHL20(2)                          <-------TEIL                      <---------ANAC58      --------->AHL20(2)                      <---------AHL20(2)                    <---------ANAC58 ------->ANAC58                               <---------AHL20(1)                 --------->ARR14(2) ------>DOF2                                  --------->AHL20(1)                 <---------ARR14(2) -----CDC5                               <---------YAB1                   <----------DOF2 ->ANAC58    ----------->GT1------>ZmHOX2a(1)--------->AHL20(2)        <-----------GT1           ---- ->ANAC58    <---------ANAC46     <---------ALFIN1*TSS                <-----------GT1      <---------MYB52(1) ------->ANAC58     <-----------GT1  <---------DAG2<---------ICU4    <---------AHL20(2)  <---------MYB46(3)   gaagcaaatttaatcgtgtataaaactatccttcttccaccttctcattatattcatttccatctttctaatttatctttccatttccgagccgttgaga  15488000                                                         --------->ARR14(2)                                                         --------->GLK1(2)                                                         <---------ARR14(2)                      ----                                                         <-----------ARR10            <---------DEAR3(1)                                <<<<<<<<<TBF1           ------>MYB83                 --------->ATERF1(1)                             <<<<<<<<<TBF1              ------>MYB46(1)              <------NtERF2                           <------------------------ANAC81      <----------DOF2     <---------ATERF1(1)                  <-----------GT1                     --------->AtMYB61            <---------ANAC58                <---------AHL20(2)                    <---------MYB111(1)          <---------DEAR3(1) ----->GLK1(2)  --------->AHL20(2) <<<<<<<<<TBF1  --------->MYB46(3)               <---------ANAC58   attttttctgagagataatttaacaaatttcttcttcttcttctgtttctgaaccaccaaatctgcctttctcaattagctatgggcgtcgctgttctaa  15488100                    <-------TEIL                                                                   <-                   <------ZmHOX2a(2)                                                              <--              ---------->DOF2                                                                     ---          <---------ANAC46                                                                        ---          <---------ANAC58                                                                        <--          <---------ANAC58                                                                        ---     =====================HOX2a_HOX2a                                                          ------     <------ZmHOX2a(1)                                                                        -------   --------->LBD16<---------ARR11(3)                                                       <---------MYB111(2)  <---------LBD16 --------->ARR11(3)                                                       --------->MYB46(3)  <-----------RAV1(2)                                                    --------->At4g35610------->GAMYB --------->LBD16  --------->AGP1                                    ------->GAMYB          <---------MYB55(2) <---------LBD16  <---------ARR14(2)                             ----------->RAV1(1)       <---------MYB52(2) ----->ARR14(2)   --------->ARR14(2)                ------>ZmHOX2a(1)    <---------At4g35610---------   atccccaggattgcttgaaagatccattctctcacatgaaacaacatcgtaatcctagcgcatgtcccaacaggcagaagaagacggtctccaacaaccg  15488200                                                            <---------ATERF1(1)                                                            --------->At4g35610                                                            <---------At4g35610                                                            ------>NtERF2                                                           --------->RAP2.3(2)                                                           --------->DEAR3(1)                                                          --------->ATERF1(1)                                                          --------->DEAR4(2)                                                          <------NtERF2                                                          --------->RAP2.3(1)                                                         ------>NtERF2                                                         <---------ATERF1(1)                                   =================HOX2a_HOX2a                                   ====================HOX2a_HOX2a                                   ------>ZmHOX2a(2)     --------->ABI4(1)                                  =====================HOX2a_HOX2a                                  <------ZmHOX2a(2)      <---------RAP2.3(1)                                  ==================HOX2a_HOX2a                                 --------->AGP1         <---------ATERF1(2)                                 <---------ARR14(3)     --------->ATERF1(2)                                 <---------GLK1(2)      --------->RAP2.3(3)                                 <---------ARR11(3)     <---------DEAR3(1)                                 --------->ARR14(2)     --------->DEAR3(1)                                 <---------AGP1         --------->RRTF1(2)            ------>ZmHOX2a(1)    <---------ARR14(2)     --------->RAP2.3(2)      <------NtERF2              --------->ARR11(3)     --------->RRTF1(3)     --------->LBD16             <-----------ARR10      <---------ALFIN1   <---------LBD16            --------->HSFB2a(2)      --------->ATERF1(1) --------->ANAC58           ==============HOX2a_HOX2a  --------->RAP2.6(1) --------->ANAC58           =============HOX2a_HOX2a   --------->RRTF1(1)      <---------At4g35610 --------->ANAC46           ------>ZmHOX2a(1)          --------->ERF1          --------->At4g35610 --------ALFIN1===========================HOX2a_HOX2a  --------->ORA47(2)    <---------DEAR3(1) -------ARR14(2)        --------->ARR14(2)      ------>ZmHOX2a(1)       ------>ZmHOX2a(1) ------>ARR14(2)        <---------ARR14(2)    ----------->RAV1(2)    ------>ZmHOX2a(1) ------>SPL7=============================HOX2a_HOX2a   --------->RAP2.3(1)   <---------RAP2.6(2) -------REM1(2)==========================HOX2a_HOX2a   <------NtERF2<---------ALFIN1 ------>ZAT14  ------>ZmHOX2a(1)<---------CCA1(2)      --------->DEAR4(2)   --------->SPL7         -- ->GAMYB    ==============================HOX2a_HOX2a <---------ATERF1(1) ------->PIF5       <------- -------->AtSPL3       --------->WOX13(1)    ------>ZmHOX2a(1)    ------>ZmHOX2a(1)          <------- --------->SPL14--------->TOE1(1)--------->ARR14(3)   <---------RAP2.3(1) <-------PIF5    <----------DOF2   tacacgccggagtcctcctcgtagtcaatcctccagatcttcttctcctcctgtagcgccgccgcttcctcctcctcgtgcggctgtctctgctttcgtt  15488300                                                         --------->TOE2(3)                                                         --------->TOE1(3)                                                      <---------ARR14(2)                                               <---------ZAT2                                               --------->ZAT2                                               --------->O2                                               <---------O2                                               --------->TGA1a                                               =======================bZIP_DOF                                               <---------TGA1a                                               <---------At4g35610  <---------ANAC46            -----                                             <-----------RAV1(2)   <------NtERF2               ------                                        <---------MYB52(1)         ------>NtERF2               <-----                                        --------->DOF5.7(2)---------->DOF2                    <------                                       ==================MYC_MYB <---------DEAR3(1)           <------                                       <---------RAP2.6(3)------>ZmHOX2a(1)                   -------                                       <-------GAMYB  --------->GLK1(2)   <---------GLK1(1)   ------- -------->DOF2                    <---------MYB52(1)  --------->ARR14(2)  --------->GLK1(1)   ------- --ANAC58                        ========================MYC_MYB<---------LBD16               <------ --ANAC58                        <-------GAMYB --------->At4g35610<---------ATERF1(1)        <-------   ccaaagggaacccttaagaagagtcttagcaataccgttgccgttagccaggtgagaatccttaagcgcggcgaagaaatccccaaggagacttcagatc  15488400                        ------>ZmHOX2a(2)                       <------ZmHOX2a(2)                     --------->LBD16                      <---------ARR11(3)        <---------ANAC46         <---------MYB52(1)                      <-----------ARR10        ------>ZmHOX2a(2)      <-------TEIL                 ------>ZmHOX2a(2)            <------ZmHOX2a(2)       ------>ZmHOX2a(2)   <---------ANAC46   <---------ARR14(2)      --------->CCA1(2)      <------ZmHOX2a(2)   <---------HSFB2a(2)--------->ARR14(2)      --------->ARR14(1)    <---------GLK1(2) <---------MYB46(3)   --------->ARR11(3)     <---------ARR11(3)     --------->ARR14(2) ->ZmHOX2a(2)   <------ZmHOX2a(2)            --------->ARR11(3)     --------->AGP1 --->CCA1(2)    --------->CCA1(2)            <---------ARR14(2)     <---------ARR14(2) -ZmHOX2a(2)   --------->ARR14(2)            <---------GLK1(2)     <---------At4g35610 ---ARR14(2)   <---------ARR11(3)            --------->AGP1 <---------ANAC58        <------NtERF2 ---AGP1       --------->ARR11(3)            --------->ARR14(2)    --------->At4g35610            <-- -->ARR14(2)   <---------AGP1              ----------->ARR10<---------ANAC46        --------->LBD16 -->AGP1       <---------ARR14(2)  --------->ARR14(2)       <---------ANAC58       --------->RAP2.6(2) -->ARR11(3)   --------->AGP1      <---------ARR14(2)      <---------LBD16 <---------CCA1(2)      --- ---ARR11(3)  <---------CCA1(2) <---------TOE1(2)--------->LBD16  ----------->ARR10--------->ANAC58 --CCA1(2)<-----------HVH21   <-----------HVH21<---------LBD16 <-----------HVH21   --------->ANAC58<-   tggttgtggaaatgtcagatctgggatctactcgtcggattggaccagatccgggtttgattccgggtcagatccgtttatctggccgcaaatcgaaatc  15488500  Previous    Next  AGI:  At4g32020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25250.1); similar to unknown [Populus trichocarpa] (GB:ABK93361.1) Range:  from: 15487950    to: 15489456    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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