Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <-----------------AGL1               ----------------->AG               ----------------->AGL1           <----------DOF2          ------>ZmHOX2a(2)         <---------RVE1(1)                                   <---------ATHB12         <------ZmHOX2a(2)                                  ------>MYB83              <---------YAB1        --------->AGP1                                      ------>MYB46(1)        --------->ICU4        --------->ARR11(3)                              -------->P              <<<<<<<GRF7        <---------ARR11(3)      <---------AHL20(2)     --------->WOX13(1)     ----------->HVH21       --------->GLK1(1)    --------->ATHB12          --------->MYB46(3)      ------>ZmHOX2a(1)  ---------->DOF2  --------->DAG2       ------>ZmHOX2a(2)--------->MYB46(3) ----------->RAV1(2) ->GT1 <---------GLK1(1)   --------->ICU4            <---------ATHB12<-------TEIL  <---------YAB1 ---   atgctaaagagatcttttccaaaggtggaatgatttttttgatctaaaacggcccatcaaccaatcttcggtccattatcctgacatgattatttgggct  15479100                                                                                     <---------AtMYB61                                                                                  --------->ALFIN1                                                                                  <-----------RAV1(1)                                                                                <---------ANAC46                                                                           <---------At4g35610                                                                           --------->At4g35610                                           ---------->DOF2               ------>ZmHOX2a(2)                   --------->At5g28300  --------->YAB1                  <---------At4g35610      <---            <----------DOF2        ------>MYB83                        --------->ARR14(2)      <-----  --------->AHL20(2)               ------>MYB46(1)                     <---------ARR14(2)  <---------AtMYB61  <---------AHL20(2)            --------->MYB46(3)                 --------->At4g35610<------MYB46(1) ------>REM1(1)   ----------->GT1 ----------->RAV1(1)              <---------At4g35610<------MYB83<--   acatttttttaagtcttttgcagtaaattgttgaaccaacaaaaataaagagttggagttggacctagtagctgatctgctgatgtgttggtgatggtcg  15479200                              ------>MYB83                               <---------AHL20(2)        ------>ZmHOX2a(1)     --------->ANAC58                           <---------YAB1   <---------PCF2             --------->ANAC58                          <---------AHL20(1)  <---------DEAR3(2)          --------->ANAC46                        --------->AHL20(1) <---------TOE1(2)            ------>MYB46(1)                        --------->AHL20(2) ---NtERF2         --------->TOE1(3)     <---------ICU4              --------->YAB1 ----DEAR3(1)     --------->ZAT6        <---------YAB1              <---------AHL20(2)--------->YAB1 -------ANAC46  <-----------GT1    --------->bZIP60(2)     <----------DOF2  <---------YAB1   tcgtgggttcctgtcttataaccctagaaaccaagccacttcatcattctcaaattcaatgctttactaaataatattattatcgaaatcaaaatactaa  15479300                                                                            --------->AHL20(1)                                                                            <---------ARR11(3)                                                                            --------->ARR11(3)                                                                        <---------AHL20(2)                                                                    --------->AHL20(2)                                                              <---------ZAT14                                                              <---------ZAT18                          --------->TOE2(3)                   --------->ZAT18                          --------->TOE1(3)                   --------->ZAT14                   --------->ANAC58                        <---------ANAC58 <---------AHL20(1)      <               <---------HSFB2a(2)                         <---------ANAC46--------->RVE1(1)     <---               --------->HSFB2a(2)                         <---------ANAC58--------->CCA1(1)   <-----         --------->AHL20(2)                           <----------DOF2   --------->AHL20(2)   <-------         <---------AHL20(2)       <---------AtMYB61  <---------DAG2 <---------AHL20(2)  --------->AHL20(2)      ------->TEIL --------->ANAC58              ----------->HVH21<----------DOF2    <---------ANAC55(2)   tttagacgtatataaatctagaagcaaaccttaggtgaggtcgaaacagagatgaccttttgcgtgcactttaattaatatcttattacataaaatgtca  15479400                                                                              <---------At4g35610                                                                           --------->TGA2(2)                                                                          <-----------HVH21                                                                          <<<<<<<<<<<AtbZIP1                                                                          <-----------TGA1                                                                         <---------bZIP60(1)                                                                         <---------O2                                                                         --------->O2                                                                         <---------TGA1a                                                                         ========================bZIP_DOF                                                                         --------->bZIP60(1)                                                                         <---------TGA2(1)                                                                         --------->TGA1a                                            ---------->DOF2              --------->TGA2(1)                                        --------->AHL20(2)              <-----------STF1                                       <---------AHL20(2)               ----------->STF1                                       --------->AHL20(2)              <---------TGA2(2)                                    --------->AHL20(2)                ----------->HVH21       <---------ZAT14              <---------AHL20(2)                ----------->TGA1 ----------DOF2                    --------->AHL20(2)            <-----------RAV1(2) ------ALFIN1   --------->TOE2(3)--------->YAB1                <-----------HVH21      <----------DOF2 ------GT1   <-----------GT1  --------->TOE2(3)              --------->MYB59  --------->At4g35610  <- ----HVH21 <----------DOF2    --------->YAB1=======================================bZIP_DOF   xxxxxxx   cactttgagtaaactttacattattctctcatccataataaataaataaagcatactgggttttaggtcaggctgacgtcagcagtttctttgtgtttca  15479500                                                                          <---------GLK1(2)                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                 ---------->ID1                 <------MYB46(1)                              *TSS                    <-----------RAV1(1) <---------ARR14(2)     <---                            --------->ARR14(2)      <---------MYB52(1)    --------->ARR14(2)     <---                            <---------GLK1(2)       <----------DOF2     ----------->ARR10     <------                     ------->GAMYB            ------->PIF5      <------MYB83 <-----------GT1<-------- --------AHL20(2) --------->MYB52(1)         --------->ANAC46 <---------ANAC46        --------->ANAC46 xxxxxxxxx>smallRNA(i)      <---------ARR14(2)<-------PIF5  <---------MYB46(3)    <----------DOF2<---   ttttttttttttttgtaatctaacgctccagatttgttgtcttctccacgagccctttgttgttgttggtaatggagattttcgctctaagtcattgtgg  15479600       <----------DOF2       <---------------AGL15       --------------->AGL15      <-----------------AGL3  <<<<<<<<<TBF1                                                                               <------ ------ANAC58                                                                                 ------- ------ANAC58                                                            <---------At4g35610  <------ ---RAP2.6(2)                                                 <---------ALFIN1                <------ ---RAV1(1)                            <---------MYB52(1)  --------->ZAT6--------->At4g35610  ------- ------ANAC46                      ------>ZmHOX2a(1)  <----------DOF2<-----------RAV1(1)     <-------   cttcttcttctttatttagaaaccaattcatcaactccttcgttatttctaaatctctttgccactacctcttgttgctgcaattgaattggctcaaatc  15479700          <---------WRKY12          <---------ETT(2)          <---------WRKY38(1)          <---------DEAR3(1) ---ARR14(2) -->ARR14(2) -----ARR10              <----------DOF2                                                    --------- ---ARR11(3)    ---------->DOF2         <-----------GT1                                --------->WOX13(1) -->ARR11(3) --------->ANAC46 <---------ANAC58                                       <---------ATHB12 --CCA1(2)--------->ETT(2)    <---------ANAC58        --------->LBD16           <------ZmHOX2a(2)   ttcttcacttggtcgacgtaaagacgactttgacttggtttttaacttcacttctccgtcgaaaactatcccttctcttccgatcgaatcaatcggctct  15479800                                                                  ------>NtERF2                                                          <---------ANAC58                 --------->MYB52(1)                       <---------ANAC58    --------->ANAC58                               --------->AHL20(2) --------->ICU4    --------->ANAC46               <---------MYB52(1)   <-----------GT1    --------->ANAC58              --------->LBD16  <---------AHL20(2) <---------MYB52(1)  <---------ALFIN1         ------->GAMYB        --------->YAB1<---------ANAC58                     -- <---------REM1(2)      <-----------GT1--------->ICU4   <---------AHL20(2)<---------ZAT6        <---- >At4g35610  <---------TOE2(3)  <---------LBD16<---------YAB1 <---------ANAC58   <---------GLK1(2)<--   ctctccacacaaaccaaggtaagggttaaccctctccggtgattatgctctgataaatttacttgctcggccattagtgttcagaaacttggtgatttat  15479900                                          ----------->GT1                                        >>>>>>>>>ARR1                                        >>>>>>>>>ARR1                                        >>>>>>>>>ARR2                                        >>>>>>>>>ARR2                                             <--                                       <------ZmHOX2a(1)                                    <--------                                      <---------YAB1     <----------DOF2                    <--------                             <---------LBD16            --------->TOE1(3)               <------------ ----->TEIL                <---------GLK1(1)            --------->TOE2(3)     ----------->GT1     --- -----YAB1                --------->ARR11(3)   --------->ICU4               ---------->DOF2 <-------- -------AtLEC2 ---------->DOF2     --------->ICU4     ------->TEIL       <-----------GT1<----------DOF2   gcatgtttttttttgttcaaagaccgtagatttcggaattaggattgtaaaaattgaacctttacatcagtgtttttacaaagttataagctttacttgg  15480000  Previous    Next  AGI:  At4g32010.1    Description:  HSI2-L1/HSL1 (HSI2-LIKE 1); transcription factor. similar to HSI2 (HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2), transcription factor/ transcription repressor [Arabidopsis thaliana] (TAIR:AT2G30470.1); similar to hypothetical protein OsJ_024584 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41101.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48871.1); similar to Os07g0679700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060642.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Zinc finger, CW-type; (InterPro:IPR011124) Range:  from: 15479530    to: 15485359    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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