Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------HSFB2a(2)                                                                        --------->HSFB2a(2)                                                                        <XXXXXXXXXXXXXXXXXXXXMIR847                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                    <---------ANAC46                                                                   <-----------------------TaNAC69(2)                                <---------AHL20(2)           <---------TOE2(3)                      -   --------->ANAC58  <---------LBD16                         <---------TOE1(3)                    <--   --------->ANAC46 <---------ANAC58                        --------->MYB52(1)>>>>>>>>>TBF1    <-----   --------->ANAC58 <---------ANAC46                    --------->ZAT6<------NtERF2           ------- ------>GAMYB       <---------ANAC58               --------->YAB1  <------NtERF2            <-------- -----GT1--------->YAB1        --------->AHL20(2) <---------YAB1 <---------DEAR3(1)         <--------   aacacacacaaacatattcaattcgtggataaatttaaaatgagagtgcttaattataagactaacgttggcgtcgagaagaagaagactgtttccttga  15411900                                                                               ------->TEIL                                                                               <---------ARR14(2)                                                                               <---------ARR11(1)                                                                               --------->ARR14(2)                                                                              <---------CCA1(2)                                                                         --------->GLK1(1)                                                                         <---------GLK1(1)                                                                        <---------AGP1                                                                        --------->ARR14(3)                                                                        <---------ARR14(2)                                                                        --------->GLK1(2)                                                                        --------->ARR11(3)                                                                        <---------ARR11(3)                                                                        --------->ARR14(2)                                                                        <---------ARR14(3)                                                                       <------ZmHOX2a(1)                                                                    <------ZmHOX2a(1)                                                                 <------ZmHOX2a(1)   <---------ANAC58                                                         --------->CCA1(2)    <---------ARR14(1)                                                        <---------GLK1(2)<------ZmHOX2a(2)                                                 =======================HOX2a_HOX2a  <---------ANAC58                                                 ==========================HOX2a_HOX2a                                                 =============================HOX2a_HOX2a<---------ZAT6                                                 ------>ZmHOX2a(2)--------->ALFIN1<----------DOF2       --------->GLK1(1)                       --------->ARR11(3)================HOX2a_HOX2a -------->ALFIN1                               <---------ARR11(3)===============HOX2a_HOX2a ---------RAV1(1)                     <---------ANAC58  --------->ARR11(3)  --------->ANAC55(2) ----WRKY18(1)    <------NtERF2       <---------ANAC58  --------->ARR14(2)  <---------ANAC55(2) ---->HVH21      --------->LBD16   <---------GLK1(2)    <---------ARR11(3)  --------->TOE1(1) -ANAC58        <---------ANAC46   <---------ARR11(3)   <---------ARR14(2)------>ZmHOX2a(2) -ANAC58       <---------LBD16  <---------HSFB2a(2) --------->ANAC46=============HOX2a_HOX2a   ctgtgggagaaatctatggcggagataaatcggtctagatacttgtgatgatctacgagatactcgaggaggaggatctcgtatctttcgagtcttaata  15412000                                           <---------LBD16                                          <---------LBD16                                        ------>ZmHOX2a(2)                                        ====================HOX2a_HOX2a                                       =====================HOX2a_HOX2a                                       <------ZmHOX2a(2)                                      --------->ARR14(3)                                      <-----------ARR10                                      <-------                                      --------->ARR11(3)                            <---------HSFB2a(1)                                      <---------ARR11(3)                            --------->HSFB2a(1)                                      <---------ARR14(2)                     <XXXXXXXXXXXXXXXXXXXXMIR779.2                                      --------->ARR14(2)             --------->ANAC46  <-------------       --------->LBD16                <---------ARR14(3)        --------->ZAT14     --------->HSFC1(2)      <---------ANAC58              ----------->ARR10           --------->ARR14(2)  <---------HSFC1(2)      <---------ANAC58       --------->LBD16   <-----------HVH21<---------ARR14(2) <---------KAN4(2)   <-----------HVH21         --------->HSFB2a(2)     <------ZmHOX2a(1)  <-----------RAV1(2) ------>ZmHOX2a(2)  --------->ALFIN1           <---------HSFB2a(2)--------->ALFIN1<---------ZAT14<---------TOE1(2)  ---   agaggtgtccgtggctcttcacaaacttctccgagaagaagatcttcggggtcgaggaaaactgagtatacgggccagtcgaaggaattttcgatcggtt  15412100                                    <---------At4g35610                                    --------->At4g35610                                    --------->ZAT2                                    <---------ZAT2                                  <---------ZAT18                                 <---------ANAC58                                 <---------ANAC46                                 <---------ANAC58         --------->ARR14(2)                             ======================MYC_MYB<---------ARR11(3)                             <---------At4g35610          --------->ARR11(3)                             <---------ZAT2               <---------ARR14(2)                             --------->At4g35610          <---------ARR11(1)                             --------->ZAT2              <---------ARR14(1)                             <-------GAMYB<-----------HVH21                                       ---        <-----------RAV1(2) <---------MYB46(3)       --------->ANAC58                             <--      <-----------HVH21  ------------>AtMYB77   ------>ZmHOX2a(1)                                 ---  --------->MYB52(1)     ==========================MYC_MYB<-----------ARR10                       <-- --DEAR3(2)           =============================bZIP_DOF     --------->TOE2(3)    <------NtERF2--- --------WRI1         ---------->DOF2    --------->TGA1a <---------CCA1(2)         <---------ANAC46 ------->DOF2        <---------AHL20(2)  --------->O2--------->ANAC58          <-----------RAV1(2)<--   caaagaccggccagacgaaggaattaaaggcagttgcgagctcccgtctcctgttaagcaaatcttcgtcaaaatccaatatcaggcgtcgataactcac  15412200         <---------MYB46(3)        <---------AtMYB61     --------->ETT(2)                               --------->ANAC58  --------->ALFIN1                                  --------->ANAC58 ------>ZAT2                                    --------->ANAC46                               *TSS -------ZAT14                                   --------->ANAC58                            --------- ------>At4g35610                               --------->ANAC58                        --------->GLK1(1) -------ZAT2                                   --------->ATERF1(2)                     --------->ARR11(3) ------>ZAT14                                --------->ZAT2                      <----------DOF2    - -------At4g35610                         ----------->RAV1(2)         ------>ZmHOX2a(1)<---------ARR11(3)   tgctgtgtcgatggtcgatgtctctatgagtttgtatttctctaacctgcaggcaagactctcgctcgtctcctccatgtcttctttcagatatcaatct  15412300                                                                <------------CBF                                                               -------->ATHB1                                                               --------->ATHB51                                                               <---------ICU4                                                               --------->ATHB12                                                              <---------AHL20(2)          <---------YAB1                                            <------------CBF  <---------ATHB51     <------------CBF                                           --------->ATHB51   --------->AHL20(2)  <---------ICU4                                   --------->ARR11(3)         --------->ICU4--------->TOE1(3)                   ----------->TBP <---------ARR11(3)      <---------AHL20(2)     --------->ATHB51       <----------DOF2           <---------TOE1(3)         --------->AHL20(1)    <---------YAB1    --------->ARR11(3)   --------->ANAC46 <---------YAB1   <---------AHL20(1)    --------->ICU4    <---------ARR11(3) <-----------GT1 --------->ICU4      --------->AHL20(2)  --------->YAB1 >WOX13(1)         --------->AHL20(2) <----------DOF2     --------->AHL20(2)--------->TOE2(3)  <----- --------->DOF2  <----------DOF2 <---------TOE2(3)  ---------->DOF2      <-----------GT1<-----------GT1   gcaaaagttctttgtaagactttatatacactattaaggtctttattattgttttaaagaataaattattgtattttaccttcataattgtcaccattat  15412400                                       --------->ANAC46            <---------AHL20(2)                                      <---------LBD16          ----------->GT1          <---------ICU4      --------->YAB1               <---------AHL20(2)      --------->AHL20(2)      --------->AHL20(2)          <---------AHL20(1)      <---------AHL20(2)     <---------ATHB12             --------->AHL20(2)                      <--    --------->CCA1(2)      --------->WOX13(1)             <---------AHL20(2)                     <---   <---------ARR11(3)     <<<<<<<<<WRKY18           <---------At4g35610  <-----------RAV1(1)  <------ ----ARR11(3)           <-----------HVH21          <---------TOE1(3)     --------->ALFIN1     <<<<<<<ZML2   ctcaagatttaaaaattacaaagactcgtcaatgaaattactcggaacaagttaagctaatttttttgttaaaatgtgttggcaaaccaaaaactagaac  15412500          --------->ANAC46         --------->At4g35610      ---------->DOF2  --------->ANAC46                       --------->YAB1 ---------HVH21       --------->ANAC46  <---------YAB1 -------DOF2   <---------ICU4        <---------YAB1                                            ------ ---ARR11(3) ----------->RAV1(1)   <------ZmHOX2a(1)         <-----------GT1   <---------ZAT6  <-----   tttcacagaacagcgcaacattacacccgaattcaaaggattattatagacaacttgcgattttttccccctaatttgctagtattaaacaagtgcaacc  15412600                                 --------------->AGL15         ----------->HVH21                                 <---------------AGL15        --------->LBD16                               --------->AHL20(2)            <---------ANAC58                              <---------AHL20(1)             <---------ANAC55(1)                              --------->AHL20(1)             <---------ANAC55(2)                              --------->AHL20(2)             --------->ANAC55(2)                       ----------->GT1                       <---------ANAC58                   <---------ARR14(2)    --------->At5g28300 <---------ANAC46                   --------->ARR11(3)   ----------->GT1  <-------MYC3  --------->YAB1  --------->GLK1(1)<---------AHL20(2)    ------->MYC2 <---------YAB1   <---------GLK1(1)--------->AHL20(2)    <-------MYC2                               < --->MYB46(3)   --------->YAB1<---------AHL20(2)         ------->MYC3                              -- ----MYB55(2)  <---------ATHB12<---------AHL20(2)  ----------->HVH21            ---------->DOF2  <---   actataatatgtccctaatgatatctggttaatttatttaaatggtaaattgtctaacacgttccgtgatatgtctcagccctaaaccggctcttgtttc  15412700                          --------->DAG2                ------>NtERF2                ----------->RAV1(1)               ----------->HVH21              <------NtERF2              --------->RAP2.3(1)              --------->ATERF1(1)             <---------ATERF1(1)             <---------ERF1             <---------RAP2.3(1)                   --------->WRKY12            <---------DEAR4(1)                     ----------->HVH21            <---------DREB2C(2)                  <---------At4g35610            <---------DEAR3(1)                   --------->At4g35610            <---------RAP2.3(3)                <---------RAP2.6(2)            --------->ETT(1)                  --------->SPL7           <---------ORA47(1)             <---------------AtSPL3         <-----------RAV1(1)             <--------P--------->WRKY38(1)   <<<<<<<<<<<<<<<<<LFY      <-----------RAV1(1)---------->DOF2 <---------MYB52(1)              >>>>>>>>>>>>>>>>>LFY    <------NtERF2<------NtERF2----------->GT1 --------->RAP2.6(3) --------->SPL7   ------>NtERF2<---------ATERF1(1)    ----------->GT1        <---------------AtSPL3 ---------ATERF1(1)     <---------ATHB12--------->At5g28300  <--------P----------->HVH21   --------->MYB52(1) ------->ANAC46--------->ETT(2)     --------->MYB52(1)    <---------ATHB12                 <---------At5g28300 --------GT1<---------At1g77200     ------------>MYB.PH3(1)<---------MYB46(3)  <---------MYB46(3)   tacggcccctgttgtcggcgacagcaataaagtggataaaacggttagtacggctgaccaatggttagtacgactgaccagtggtttctcaattaccggt  15412800  Previous    Next  AGI:  At4g31875.1    Description:  unknown protein Range:  from: 15411707    to: 15412295    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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