Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 ------->TEIL        <<<<<<<ZML2                                         ---------->ID1                         --     <---------HSFB2a(2)                               <---------GLK1(2)                    ---------     --------->HSFB2a(2)                             <---------YAB1                     <------ZmHOX2a(1) --------->WOX13(1)                                  --------->ICU4           <----------DOF2 -------   gagcaatctagaacatgaacgtttttagtgaatgtattgtttttgtttgtttagaatgattcttcgttttcgaattgtgtctttcgattaggagataaaa  15384900                                                          --------->TOE1(2)                                                        --------------->AtSPL3                                                        <---------------AtSPL8            --------->YAB1                              --------------->AtSPL8           <---------YAB1                               <---------------AtSPL3          --------->AHL20(2)                         --------->AHL20(2)        --------->ICU4                             --------->TOE2(3)                   <---------ANAC58     <---------AHL20(2)                            <----------DOF2                     <---------ANAC58     --------->AHL20(2)                            --------->TOE1(3)                   <---------ANAC46  ------->TEIL      --------->At4g35610     --------->HSFB2a(2)                   --------->At4g35610 --------->GT1<---------YAB1                <---------HSFC1(1)                    <---------At4g35610 >CCA1(2) --------->AHL20(1)                <---------HSFB2a(2)                <---------MYB52(1) --->DOF2<---------ICU4                <XXXXXXXXXXXXXXXXXXXXMIR781       <-----------GT1 --------->At4g35610   gatgtatataaatattataagtagatgaagaaatcgtataagtattcgagaaactttaaatgtacgaattctatataaccagttagatgtcgtctgaata  15385000                                                                                       >>>>>>>>>SARD1                                                                              --------->ATHB12                                   ---------->DOF2                            <---------AHL20(2)                             <-------GAMYB                                   <---------AHL20(2)                            <---------MYB46(3)                               --------->AHL20(2)                            ----------->GT1                                <---------------AGL15                         <---------ANAC46                              <----------DOF2 >>>>>>>>>CBP60g                         <---------bZIP60(2)                 <---------YAB1--------------->AGL15                   <---------AHL20(2)                      --------->YAB1 <-----------------AGL1                  <---------AHL20(2)    <-----------HVH21 <---------ATHB12<-----------------AGL3                  --------->AHL20(2)--------->DAG2      --------->WOX13(1)<-----------------AG ------   ctgtatatgaaaattttgaaataaatgatgtggttaaaaaagggtcaccataaatattcaatcacaatagtctctttcatttattggaaatttggagtca  15385100                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                             --------                                                                            <---------ANAC55(2)  ----                                                   --------->YAB1  ----------->GT1     <------MYB46(1)                                                <----------DOF2    --------->ANAC58    ----------->GT1     ----------->GT1                     --------->ANAC55(2)       --------->ANAC58   --------->MYB59   ---------->DOF2                 <---------ARR11(3) --------->YAB1        --------->ANAC55(2)  <--- --->ATHB12--------->YAB1          --------->ARR11(3) <---------ICU4 --------->AHL20(2)<------MYB83   tttgagaaagaaataagaattggacatcactaaatagtatcttaagtattctttaataatgtgttacacaagtaaattatgtattaagttggtaatacaa  15385200                                                                                      *TSS                                                                                     <---------AHL20(2)      ---------->DOF2                                                           <---------YAB1 ------>ZmHOX2a(2)                                                          <---------GLK1(2) ------>ATHB12                                                          <---------ANAC55(2)       <-- ------>YAB1                                                            <---------ANAC46 <-----------GT1 ------ATHB12                                                           --------->O2 --------->AHL20(2) ---->CBF---------->DOF2                       --------->ANAC46         <---------O2--------->AHL20(2) ----->ICU4                                <-----------GT1              --------->ANAC55(2) ------>ZmHOX2a(1) ------YAB1  ----------->GT1          ---------->DOF2                 <-------------DYT1<-----------GT1   tgatcggaaaaagaagcgcaaaaattcaaatgagaaaaatcaaagtttccctccataaactcactctgcaagtctcgtgattctcatttatttcctctcc  15385300                                                                      --------->ANAC46                                                             --------->PCF5                                                             --------->PCF2                                                        ===================HOX2a_HOX2a                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                       ====================HOX2a_HOX2a                                        <---------YAB1--------->ARR14(2)                                <---------ALFIN1      --------->ARR11(3)                              --------->SPL7     --------->ARR14(2) ------>ZmHOX2a(1)           <----                            <-----------HVH21    <---------ARR14(2)--------->TOE1(2)   --------->AHL20(2) -------ALFIN1    <---------MYB52(1) --------->ICU4   <---------ARR14(2)            <----------DOF2   ccatctgttcatagctctctgttacgactccgtcccaccattatcaatgtctatccgatcttggtccctcctacgaagccttcttccttttaaatctcgt  15385400                                                                             --------->ALFIN1                                                                            <------ZmHOX2a(1)                                                                          --------->ALFIN1                                                                         <------NtERF2              -                                                                         --------->ATERF1(1)        -                                                                       <---------DEAR3(1)           <                                                                       --------->ALFIN1          <---                                                                       <---------ANAC46          <---                                                                      <------NtERF2              <---                                                                      <---------LBD16     --------->ZAT18                                                                      ------>NtERF2       <---------ZAT18                           --------->KAN4(2)                          --------->ATERF1(1) <---------ZAT14                         <---------YAB1                             <---------DEAR3(1)    <-------TEIL                       --------->YAB1                         <---------HSFC1(2)          --------->ZAT14                       <---------ICU4                         --------->HSFC1(2)       <---------ANAC58                      <---------YAB1                          --------->HSFB2a(1)      <---------ANAC58                      --------->ICU4                          <---------HSFB2a(1)      <---------ANAC46 -----CCA1(2)         <---------ATHB12            <<<<<<<<<MYB2    <---------LBD16    <---------MYB46(3)   ctcttgttccaaacccaaaaacccatgattattcgttttctgtcttctcttggttttcaatggaaggctcgcggcggaggaggggagatgggtgcactat  15385500                                 <---------MYB52(1)                                 --------->ATERF1(1)                                <---------DEAR3(2)                               <---------MYB46(3)                               --------->MYB55(2)                             --------->PCF5                             <---------PCF2                            <---------SPL7                        <---------ANAC46                        <---------ANAC58                        <---------ANAC58                       <-------TEIL                      --------->GLK1(2)       <--------P                     <---------GLK1(2)<----------DOF2    <---------ZAT6   --------->ARR14(2)      <-------GAMYB    ----------->GT1  <---------ARR14(2)  <---------ANAC46  <---------ANAC46  <---------HSFB2a(1)  <---------LBD16 -------->ZAT18     <---------GLK1(1)<---------ANAC58 -------->ZAT14   <------ZmHOX2a(1)  <---------ANAC58                             <------ZmHOX2a(1) ---------ZAT14--------->HSFB2a(2)  <------NtERF2                         <-----------RAV1(2) ------ANAC58  ------>ZmHOX2a(1)<---------ATERF1(1)                      <-------TEIL ------ANAC58  <---------HSFB2a(2) ------>NtERF2                      --------->At4g35610       <---- ------ANAC46 --------->TOE1(2)<---------DEAR3(1)                     --------->CCA1(2)    --------->At4g35610   cgtgcagtgttatactcctaggagattcgtgggccggtggctttcggggttgagaagttccaaggggaagagagatgcaggggaggaacaagaagatgac  15385600                                                                               ------>NtERF2                                                                              <---------ATERF1(2)                                                                              --------->ATERF1(2)                                                                              --------->RAP2.3(2)                                                                              --------->DEAR3(1)                                               <---------ZAT2           --------->ARR14(2)                                               --------->At4g35610      <---------ARR14(2)                           --------->ALFIN1    <---------At4g35610  --------->At4g35610      --------          --------->WOX13(1)        ----------->GT1               --------->YAB1----------->RAV1(2)    ----------->GT1     <---------TOE2(3)      --------->ZAT2    ---------->DOF2<------NtERF2<------- -----bZIP60(1)         --------->DAG2  --------->AHL20(2)  <------ZmHOX2a(1)--------->RAP2.3(1)   <-   accagaaggtatcaattagcgcctataaggtgttcgacgagtttaaatcagctggtaatgcaggacaataagcagaactgccgcctgaataagagtaaag  15385700                                                                               --------->ATHB12                                                                               <---------ICU4                                                                              <---------YAB1                                      <----------DOF2                        --------->ARR11(3)                        --------->ARR14(2)                                   <---------ARR11(3)    <-                        --------->GLK1(2)                                   --------->YAB1   <-------                        <---------ARR14(2)                   <---------HSFB2a(2)        --------->At5g28300  <------NtERF2         --------->ARR11(3)                   --------->HSFB2a(2)       ----------->GT1 --------->LBD16        <-----------ARR10                   <---------LBD16 <---------ICU4   >>>>>>>> -->DOF2               <---------GLK1(2)             --------->AHL20(2)     -------->HAHB4   >>>>>>>> --ZAT14         <------MYB83       ---------->ID1   <---------AHL20(2)    --------->ICU4  <---------YAB1 --------LBD16   <------MYB46(1)   <-----------GT1<----------DOF2          <---------ATHB12----------   agccggagactaatacatttggtgagaatcttgtgtttttctttttcatacacttttaattctctggaaatagcctaatgatcattgaacggtaagattg  15385800  Previous    Next  AGI:  At4g31800.1    Description:  WRKY18 (WRKY DNA-binding protein 18); transcription factor. Identical to WRKY transcription factor 18 (WRKY18) [Arabidopsis Thaliana] (GB:Q9C5T4;GB:O81768;GB:Q944H8); similar to WRKY60 (WRKY DNA-BINDING PROTEIN 60), transcription factor [Arabidopsis thaliana] (TAIR:AT2G25000.1); similar to WRKY1 [Brassica rapa subsp. chinensis] (GB:AAS13378.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 15383207    to: 15385035    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g31805.1    Description:  WRKY family transcription factor. similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT5G10890.1); similar to Os02g0795200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048383.1); similar to hypothetical protein OsI_009083 [Oryza sativa (indica cultivar-group)] (GB:EAY87850.1) Range:  from: 15385286    to: 15386988    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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