Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------ANAC58                                               <---------TOE1(1)                                               <---------ANAC58                                              ------->TEIL                                              <-------TEIL                                           <---------ANAC46                                          --------------->AtSPL3                                         <---------At5g28300                                         ------->TEIL                                        <-----------GT1                                      --------->HSFB2a(1)                                      <---------HSFB2a(1)                                     <---------KAN4(2)                                     <---------------AtSPL3                                     ---------->TaMYB80  --------->MYB52(1)                                 --------->ANAC58        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                 <------NtERF2--------->SPL7                                 --------->ANAC58--------->ALFIN1 ----------->GT1              >>>>>>>>>ARR2    <-----------RAV1(2)  <---------ANAC46                          -------             --------->ATHB12 <------NtERF2<---------ANAC58      --------->ALFIN1            --------            <---------YAB1 <------ZmHOX2a(1)<---------SPL7     --------->ALFIN1              <-------     <---------ANAC46   <-----------RAV1(2)<---------ANAC58   <---------ARR14(2)       ---------->DOF2   aattgtgaggggttttgattgtgagagcaggaggcagggaatgtaccgtacgtggtggaaaacggatgtgggaaattctcaaaatcaccgaaagagatat  15376800                        --------->DREB2C(2)               <------MYB46(1)               <------MYB83              <---------AtMYB61         <---------ANAC46        <---------LBD16--------->DEAR3(2)        <---------At4g35610  <------NtERF2 -->GLK1(1)  <---------WOX13(1)                                                                ------ ->ARR11(3) <---------ARR14(2)                   <-----------HVH21                             <----- --ARR11(3) --------->ARR14(2)              --------->ARR11(3)   <---------TOE2(3)     <---------ZAT6   cgaagattgtagcggattggtttggaccggcatcgaaagagttggagataatgtcacagaatgcattgaggctggctaaaccagaagcagtgttcaagat  15376900                      ----------->GT1                <---------ANAC58                <---------ANAC58             <-------PIF5             <-------MYC3             ------->MYC3             <-------MYC2      --------->CCA1(2)                   XXXXXXXXXXXXXXXXXXXX>MIR396A                      ---------     <---------ARR11(3)--------->LBD16    ------>ZmHOX2a(1)                      <-----------GT1 <---------AtLEC2  <---------WRKY18(1)   XXXXXXXXXXXXXXXXXXXX>MIR396B         <---------REM1(1) --->ARR11(3)------->MYC2                --------->TOE2(3)        --------->GLK1(2)--------->ZAT6 ----ARR11(3)------->PIF5    --------->AHL20(2)             <---------MYB59   ----------->GT1   agtgcatgatatgcacgagcttgtccgtaaaaaaaatagtcttcctcaactctcttgcactgcctaataatctatatatgttgtaactctattcattcaa  15377000                                                                         ---------->DOF2                                                              <---------AHL20(2)    <---------ICU4                                         --------->ANAC46    --------->AHL20(2)  <---------ICU4   <---------ATHB12                      <---------ICU4      <---------AHL20(2)  --------->YAB1 --------->WOX13(1)                      --------->YAB1      <---------AHL20(1) --------->ICU4      < >AtLEC2         <----------DOF2----------->GT1             --------->ICU4      <---------ATHB12    -   attcaatcactctaatctcctttcttagacaagagtgtaataaacatcacaatattgtagtaatttttttgccctaaatgcaataatcagggccgattac  15377100                <---------YAB1                --------->ICU4                ----------->GT1              --------->YAB1              <---------ICU4             <---------ATHB51        --------->AHL20(1)           --------->YAB1<---------ANAC55(2)          <---------AHL20(2)         <---------AHL20(2)         --------->AHL20(2)          --------->AHL20(2)      <----------DOF2    --------->ANAC55(2) <---------AHL20(2)  -------->P --------->ICU4 <---------ARR14(2)     <---------YAB1   <------------CBF  ------>MYB83-------->HAHB4--------->ARR14(2)   --------->YAB1 --------->ANAC58  ------>MYB46(1)--------->YAB1     <---------AHL20(2)      <---------MYB52(2) ---------MYB111(1)<---------YAB1   --------->AHL20(2)    ---------->DOF2 -------->AtMYB61-------->HAHB4------------>CBF <---------YAB1  --------->ANAC58                 ----   taccaactctttttaataatgataaataagtatcccaattaaattagtttattataactccaaagaacgacattgtttcatgggacttaaaaaaaaaaca  15377200                                                                      <---------TOE1(3)                                                                      <---------TOE2(3)                                                                   <----------CDC5           <----------ID1                                     <---------At4g35610    ----------->GT1                                           <------NtERF2                      <---  ---------->DOF2                                             <---------SPL7                   <----- --------->ICU4             --------->DAG2                    --------->At4g35610         <----------DOF2 <---------ATHB12*TSS      ---------->DOF2                  <---------DEAR3(1)           <---------DAG2 -------->CBF  ---------->DOF2              <-----------GT1------>NtERF2        <---------ANAC55(2)   gcaataaagaaaaaaaacaaagagacacaaaaagggttttgagtattgaccttcttctctcggccgctcgctgaggtttatcaagtgagagccttttctt  15377300                                                                                         <---------MYB52(1)                                                                                        <-----------HVH21                                                                                ------>ZmHOX2a(2)                                                                                =====================                                                                               ======================                                             <----------DOF2                   --------->CCA1(2)                                    ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                                   <------ZmHOX2a(2)                          <---------AGP1                                  <---------ARR11(3)                          --------->ARR11(3)                                  <---------ARR14(2)                          <---------ARR11(3)                                  --------->ARR11(3)                         <---------CCA1(2)                      ----------->GT1<----------DOF2                      =============HOX2a_HOX2a           ------->GAMYB          --------->ARR14(2)                      ------>ZmHOX2a(1)      ----          --------->ANAC46   --------->GLK1(2)                           --------->TOE1(3)  ---------          --------->ANAC58   <---------ARR14(2)                          --------->TOE2(3)  <-------- ------LBD16        <-----------RAV1(2) <---------AtMYB61             <-----------GT1 <-------TEIL  - -----DOF2--------->ANAC58   --------->ARR14(2)                 ---------->ID1--------->AGP1<--------   tcggagttttcaacgcaattcttcaggtaaaaatccgatcttttggtctttcaagtctatggatttgtcgattttccttagatctaagttcgtcagcttg  15377400         <---------YAB1 <---------WOX13(1) ======HOX2a_HOX2a     <---------ANAC58                                                   <---------- ======HOX2a_HOX2a     <---------ANAC58                                 --------->At4g35610 ------>ID1         <---------WOX13(1)                               ---------->DOF2      ----------- >At4g35610       --------->ATHB12                         <-----------RAV1(1)      --------------->AtSPL8 -ZAT2 <---------At4g35610--------->ATHB12                 <---------MYB46(3)       <---------------AtSPL8 ----->ZmHOX2a(1)<---------YAB1            <---------TOE2(3)   <-----------HVH21 --------->ARR11(3) -At4g35610 <---------WOX13(1)             <---------TOE1(3)<-------GAMYB  --------->At4g35610   <---   tccttgttcttctgattgtctgattgagtgattagttcatgttttaaggttttgtttttgtctgttgtcagagaagcagaagagatgttgtacattatag  15377500         <------ZmHOX2a(1)  --------->TOE2(3)                                             <----------DOF2  <------MYB46(1)           --------->TOE1(3)                                     --------->ZAT6  <------MYB83           <-----------GT1                                     --------->HSFB2a(1) <---------AtMYB61    --------->CCA1(2)                                      --------->At4g35610    < --------->MYB59     --------->ARR11(3)            <---------TOE2(3)         <---------HSFC1(2)   --- -----AGL15          <---------ARR11(3)        <-------GAMYB  ---------->DOF2--------->HSFC1(2)------ ---->AGL15      ---------->DOF2              <---------MYB46(3)             <---------HSFB2a(1)  <-- ------ZAT6--------->At4g35610      <------ZmHOX2a(1) <---------GLK1(1)      <---------At4g35610  ---   ggttaggtttaggagatgaaaaagatataaccttgagaggactcgaggctgttaagaaatcacagaaagtatacatggaagcttacacttctcttttgtc  15377600          <---------ZAT2                                                       --------->ANAC46          <---------At4g35610                                           <----------DOF2 ---------AtMYB61   <----------DOF2                                    <---------ANAC58           <-- --->ZmHOX2a(1)   ------->TEIL                                         <---------ANAC58           --- ---->ID1 --------->At4g35610                                     <---------ICU4               <----- --------DOF2  <---------WOX13(1)         ---------->DOF2        <-------TEIL<---------ALFIN1 ------- ------------------>WRI1   <---------ATHB12                <XXXXXXXXXXXXXXXXXXXXMIR417   <---------YAB1   ctttggtctctctgctgatggactttccaatcttgtaagactctcaaagcctcgttgatttagtagattcattactttcccacccagttttctgattaaa  15377700  Previous    Next  AGI:  At4g31780.1    Description:  MGD1 (MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE A); 1,2-diacylglycerol 3-beta-galactosyltransferase/ transferase, transferring glycosyl groups. similar to MGD2 (monogalactosyldiacylglycerol synthase 2), 1,2-diacylglycerol 3-beta-galactosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G20410.1); similar to monogalactosyldiacylglycerol synthase [Cucumis sativus] (GB:AAC49624.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44370.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN84152.1); contains InterPro domain Monogalactosyldiacylglycerol syn Range:  from: 15374005    to: 15377140    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g31790.1    Description:  diphthine synthase, putative (DPH5). Identical to Probable diphthine synthase [Arabidopsis Thaliana] (GB:O81769); similar to unnamed protein product [Vitis vinifera] (GB:CAO61003.1); contains InterPro domain Diphthine synthase; (InterPro:IPR004551); contains InterPro domain Tetrapyrrole methylase, subdomain 2; (InterPro:IPR014776); contains InterPro domain Tetrapyrrole methylase; (InterPro:IPR000878); contains InterPro domain Tetrapyrrole methylase, subdomain 1; (InterPro:IPR014777) Range:  from: 15377217    to: 15379031    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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