Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------TOE1(3)                                 <---------TOE2(3)                                 <---------YAB1                              <---------AHL20(2)                           ------->TEIL                            <---------ARR14(2)              <-                        --------->ANAC55(2)                        <---------GLK1(2)               --                        <---------ANAC55(2) --------->ATHB12    --------->YAB1      <---------At4g35610                    <-----------TGA1       <---------YAB1   --------->MYB46(3)      --------->At4g35610                    <-----------HVH21<-------TEIL <---------GLK1(1)--------->ARR14(2)          ------                    <---------RAP2.6(3)    <-------TEIL--------->LBD16--------->TOE2(3)     ---------   cttctcttgttagataagaagtcgtcatgtattttatggttcatgttcattgaaatccccaaaccatcatattctcaataaccaagagctgaaacaaaga  15102800                                                             <---------ANAC46                     <--                                                             <---------O2                         --- --------->At4g35610                                  ---------->DOF2                          ------ <---------At4g35610               ---------->DOF2  --------->ANAC58                         <------- --------ZAT18                 <---------ZAT14      --------->ANAC58                         -------- ------->ZAT18         <---------ARR14(2)        <------ZmHOX2a(2)                  <---------ANAC58 --->DAG2              --------->ARR14(2)       --------->ARR11(3)                  <---------ANAC58 ->DOF2               <---------GLK1(1)        <------ZmHOX2a(1)                <----------DOF2------   gtgagcttaatatcccatctaaacaaatccgagttcagaaagcacaagaggatcaagaaagtcacttggactctgttttcttctttgcttaaaaacctaa  15102900                                                                                                -----                                                                                            <--------                                                                                          --------->YAB1                                                                                          -------->HAHB4 -------ICU4                                                 ---------->DOF2              <---------ICU4 ------->DOF2                                           ----------->GT1      <---------TOE2(3)------- >MYB46(1)                 <------ZmHOX2a(1)           --------->DAG2        <---------TOE2(2)<------ --MYB59                <-----------RAV1(2)           ---------->DOF2    ------->TEIL    --------->ICU4 ->TOE2(3)         --------->ANAC58             <----------ID1        --------->ANAC58 <---------ICU4 >MYB83            --------->ANAC58            <------ZmHOX2a(1)      --------->ANAC58--------->ICU4   taaagactgttttcagacatcaagaaacaggagagtttgtgaacagagaggagacaaaaagtagaaagtcaaacgcacttaggttgacataattatgatc  15103000                                                                        <---------YAB1                                                                     <---------AHL20(1)                                                                <---------AHL20(1) --------->ANAC58          --------->ANAC46                                      <---------AHL20(2) --------->ANAC58       ----------->HVH21                                    <---------AHL20(2)    <-------TEIL <-----------RAV1(2)                                       <---------YAB1     <---------TOE2(3)------ ->ZmHOX2a(2)                                             <---------AHL20(2)  <---------TOE1(3)------ -YAB1<-----------HVH21<-----------GT1            --------->At4g35610--------->AHL20(2)        <----- -->ARR11(3)   --------->ARR14(2)                 <---------At4g35610<---------AHL20(2)   ---------->DOF2 ---ARR11(3)   <---------ARR14(2)                 --------->ZAT2--------->AHL20(2)--------->SPL7   tcaccaggtatcacgcggtttcgattttcaatattccttcattcacaaaaacagctgtatttttattttattttatttttagggttcgccattaaagtgc  15103100                                                                 *TSS                                                               ========================HOX2a_HOX2a                                                               ------>ZmHOX2a(2)                                                              --------->GLK1(1)              --------                                                              <------ZmHOX2a(2)              --------                                                              =========================HOX2a_HOX2a --                                                             --------->ARR11(3)              --------                                                             <---------ARR14(2)            <---------ALFIN1                                         <------ZmHOX2a(2)   --------->ARR14(2)           <---------ZAT18                                  ---------->DOF2            <---------ARR11(3)         --------->ORA47(1) --->ZAT14                      ----------->TBP              <---------AGP1           --------->DEAR3(2) --->ZAT18                 --------->GLK1(2)       ---------->DOF2       ----------->HVH21--------->ZAT14 ----ZAT14                <---------GLK1(2) <---------LBD16  --------->AGP1     ------>ZmHOX2a(1)  <-   tctgtttattctaatattcagagggacagaatctataaaagcgatctacggctaaaagaaacagatctcgtttcagtgactcctgcaaaccgtccactcc  15103200      --------->ZAT18   <---------ANAC58       --------->AHL20(2)   <---------ANAC58     ----------->GT1 ->ANAC58             ---------->DOF2 ->ANAC58          --------->HSFB2a(2)                                                              < ----->MYC3        <---------HSFB2a(2)                   <-------TEIL                               - ->ANAC46    --------->DAG2                          <---------TOE1(2)                              - ------MYC3 ---------->DOF2         <----------DOF2 ------>ZmHOX2a(1)<----------DOF2                <   atgtggattgcacaaaaagttctataaagaaaatatagcttttagactttggtcctagattcaactaatctctttttctatttcttctgtgttcttctct  15103300                                                                                                   <-                                                                                                   <-                                                            <---------ARR14(2)                     --                                                  <----------DOF2                                 ---                                                --------->ZAT18                                   <--                                                <---------ZAT18                                   <--                                                <-------TEIL--------->ARR14(2)                    ---                                  <---------------AGL15     <---------ARR11(1)                    ===                                  ===================================================================               <------ZmHOX2a(1)  --------------->AGL15     ------->TEIL                         <---          <---------ANAC46        ------>ZmHOX2a(1)         <-----------ARR10                 ------- ---------At4g35610             ===================================================================== -------->HSFC1(2)              <-----------------AG--------->AHL20(2)                       -------- -------->HSFB2a(1)             <-----------------AGL1     <---------CCA1(2)                 -------- ---------HSFC1(2)        <----------DOF2  ---------->DOF2 <---------ARR14(1)   <---------MYB46(3)<--   gaagcttccattgtgtaggacttatgctcttttctcctacttagggaaagtgcattaattcgtatctatctaggcacagagattgttgataacttatcgt  15103400            --------->GLK1(2)          <---------HSFB2a(1)          --------->HSFB2a(1)          --------->HSFC1(2)      ----------->GT1 --------->AHL20(2) --------------AGL15 ---------DOF2 ------------->AGL15                                                                                - -------------->AGL2                                                                                - ---------------AGL2                                                                         <------- ---------------AGL3                                                                      ------>ZmHOX2a(1) -------------->AGL3                                                                    ------------- ==================================================================================================== ==============MADS_MADS                                                                <------------ ------TOE1(2)                                                                      <---------HSFC1(2) -->YAB1  <---------HSFC1(2) <------ZmHOX2a(1)                                      --------->HSFB2a(1) ==============MADS_MADS ------->GAMYB                                              <---------HSFB2a(1) ------->AtSPL8       --------->MYB52(1)           --------->AtLEC2                 --------->HSFC1(2) ------->AtSPL3       ----------->RAV1(1)  --------->YAB1                           --------->At4g35610 ---------------AGL1 --------->MYB46(3)   <---------ATHB12              ---------->DOF2 <------------   actttaaatggaaaattctatgaacaacagaggacatggacacaatcaagaacatgcagacaacttgccagaatcaaagagacagaagcttcctgctttg  15103500 ----------->GT1 -------->ANAC58 -------->ANAC58 ---DOF2                      ----------->GT1 ---->AGL1                    <---------ANAC46 =====MADS_MADS               <---------ANAC58                                                    --- -----AG                      <---------ANAC58                                                ------- -----AGL1    <---------AHL20(2)                                <----------DOF2           <---------MYB46(3)   gcaaggtaactcatattttatatgttagtgtgtcgtaaattcgattgttttggctaattctgaagtctttttgtatcggaccttgttttgagttgttcat  15103600                                    --------->YAB1                                   <---------YAB1                           --------->ANAC58        <                                  <---------ARR11(3)                        --------->ANAC58    -----                         <---------ANAC46                               --------->ANAC58        <---- <-----------GT1       --------->ZAT14                                  --------->ANAC58        <---- ------>MYB52(2)       <---------ZAT14   <----------DOF2        <---------ANAC58                ----- -->ATHB12 ---------->DOF2        --------->ARR11(3)            <---------ANAC58 <------NtERF2  =====   tagttacactgtccaaagagcatagtactgtggaaatatcatacttttcaaattttcgatagtcttgcttagcctcgcaaggcctcaaattttctcagac  15103700  Previous    Next  AGI:  At4g31000.1    Description:  calmodulin-binding protein. similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT2G24300.2); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT2G24300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22749.1); contains InterPro domain Calmodulin binding protein-like (InterPro:IPR012416) Range:  from: 15103165    to: 15105985    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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