Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->YAB1                                                                                 <-------TEIL                                                                             <---------YAB1                                                                        --------->YAB1        <------                                                                        -------->HAHB4     --------->ANAC46                                                                        <--------ATHB1     --------->ANAC58                                   <---------LBD16                      --------->ATHB12   --------->ANAC58                         =================================HOX2a_HOX2a   <---------ICU4   <---------ALFIN1                         ------>ZmHOX2a(2)                             <---------YAB1  --------->ANAC55(2)                       --------->ARR14(2)                              <---------ATHB12--------->ANAC58                      <------ZmHOX2a(1)                                --------->ICU4  <---------ANAC55(2)              --------->YAB1   <----------DOF2                     <---------MYB52(2)  --------->ANAC58      <XXXXXXXXXXXXXXXXXXXXMIR864-5P--------->LBD16------>ZmHOX2a(1)  <---------TOE2(3)--------->ANAC46   tcgattttcaagttgatcatatcaggatcgatactttcagggattgagtagtcctcaatggcccatacaactaatgattgtgattcatcacgcactccac  14982100                                            <------ZmHOX2a(2)                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                                <---------AGP1                     --------->CCA1(2)     --------->ARR11(3)                    <---------ARR11(3)     <---------ARR11(3)                    --------->ARR11(3) --------->YAB1                    ------>MYB83            --------->ANAC58    --------->AGP1   --------->YAB1          ------>MYB46(1)            <---------ANAC55(2) <---------ARR11(3)                     <---------MYB111(1)   --------      <---------TOE2(3)   XXXXXXXXXXXXXXXXXXXX>MIR865-5P        --------->AHL20(1)          <--------  <---------ZAT2---------->DOF2 --------->ARR11(3)         <---------AHL20(2)             --------->bZIP60(1)  <---------At4g35610--------->GLK1(1)<---------ATHB12     --------->AHL20(2)     ---------->DOF2 ---ALFIN1  --------->ANAC58  --------->MYB59   <------ZmHOX2a(2)      <---------MYB111(2)<---------bZIP60(1)   atccagctaatgttacgaaaaagatatcaagttagatctaatcaagatcgatcatagacatataaatatactaccaacttcacagaaagatgatatcata  14982200                                                 --------->RAP2.6(2)                                                 ------>NtERF2                                                --------->ATERF1(2)                                                <---------ATERF1(2)                                                <---------ANAC46                                                <---------DEAR3(1)                                               <------NtERF2                                               --------->ATERF1(1)                                               --------->RAP2.6(3)                       --------->At4g35610    <---------ATERF1(1)                     --------->YAB1          <---------DEAR3(1)                    <---------ATHB12        <---------ANAC46                  --------->GLK1(1)         <---------ANAC58              <---------HSFB2a(2)           <---------ANAC58              --------->HSFB2a(2)         <---------MYB46(3)              --------->HSFC1(1)     --------->HSFB2a(2)      --------->GLK1(2)              <---------HSFC1(1)     <---------HSFB2a(2)   --------->ANAC58                     -----        <---------AHL20(2)          <---------LBD16        --------->ANAC58                <---------ANAC58       <---------AHL20(2)        --------->GLK1(1)         ----------->ARR10               <---------ANAC58 ->YAB1<---------AHL20(1)        <---------GLK1(1)  ---------->DOF2                    --------->ARR11(3) -YAB1 --------->AHL20(2)       --------->ARR14(2)<------NtERF2                 <---------ANAC46<----   aacaaacaattaatttcgagaaatcatcttactggatttcccgatggctggcggcaaagggaagaaactggacatggtttcgacgtagagatttcgttct  14982300                                                               <---------ANAC58                                                               <---------ANAC46                                                               <---------ANAC58                    <---------At4g35610                       <------NtERF2                    --------->At4g35610                      <---------MYB46(3)                  <---------ANAC46                           ------>NtERF2                 <------NtERF2                               --------->MYB55(2)                 <---------At4g35610                        *TSS                ------>NtERF2                               --------->ALFIN1                --------->MYB55(2)                          <---------DEAR3(1)                <---------MYB46(3)                        <---------MYB46(3)              <---------MYB52(1)                     ---------->DOF2   <---------AHL20(2)                               --------->YAB1   --------->AHL20(2)         <----------DOF2      <---------YAB1              <----------DOF2 ---->HSFB2a(2)<---------DEAR3(1)               <---------AHL20(2)   <---------At4g35610 -----HSFB2a(2)--------->ALFIN1                 --------->AHL20(2)   --------->At4g35610   gggattttattgtaccggtggctgatgagggactttgtgaatttagggattttattatagcggtggctggctgatgagcgactttgtgaatttagggtct  14982400             ------>NtERF2                                                                        ---             <------NtERF2                                                                  ------>ZmHOX2a(1)           <---------ANAC58                                                               ------>ZmHOX2a(2)           <---------ANAC58                                                             <---------ARR14(2)           <---------ANAC46                                                             --------->ARR11(3)          <---------LBD16                               --------->ANAC58                --------->ARR14(2)          <<<<<<<<<E2Fd                  <---------TOE1(2)                            ----------->ARR10          <<<<<<<<<E2Fc                  <---------TOE2(2)            <-----------RAV1(2)<------ZmHOX2a(2)  ------------>CBF                 <----------DOF2      --------->ANAC58   <-------TEIL <---------ARR11(3)   gtctgtcaatttggcgggctgtccatgggccaagcgtctttcgcaggtttttgggcccaagcctactaagtgccaggtccagcccattaagatcctatat  14982500                                                                   --------->DEAR3(1)                                                                 <---------At4g35610                                                                 --------->LBD16                                                                 --------->At4g35610                                                               <---------LBD16                                                            <---------ZAT14                         ------>MYB46(1)                    --------->ZAT18                       <---------ALFIN1                     <---------At4g35610                       ------->GAMYB                        --------->At4g35610            <------------CBF                              <---------ZAT18         ------------>CBF------>MYB83                     --------->ZAT18             --------->At4g35610       <---------ZAT18--------->MYB46(3)                ------->MYC3                  <---------At4g35610       --------->ZAT18<---------MYB55(2)                <-------MYC3------>NtERF2     --------->LBD16   --------->CCA1(2)<-----------GT1               --------->YAB1--------->ANAC46  --------->ARR14(2) ------->DOF2 --------->YAB1*TSS     ---------->DOF2 --------------------->WRI1   <---------ARR14(2)   caaagatagggcacaattgtagtaaccaccctaatttcacaaagtctctcaataaccatgtgtgctccgcagccctccaacgagtttccgctgatttttc  14982600                     <---------GLK1(1)                     --------->GLK1(1)                     <------ZmHOX2a(2)                    <---------AGP1                    --------->YAB1                    <---------ARR14(2)     --------->YAB1         <------MYB83                    <---------ARR11(3)     <---------ICU4         <------MYB46(1)                    --------->ARR14(2)     --------->ATHB51       <---------ANAC46                    --------->ARR11(3)     -------->ATHB1        <---------MYB46(3)                   <---------ARR14(1)      <--------ATHB1        --------->MYB55(2)          ------>ZmHOX2a(2)               <---------YAB1        <---------MYB55(1)         --------->CCA1(2)                <---------ATHB51     <---------MYB52(1)         <------ZmHOX2a(2)                <---------ATHB12    <-------GAMYB        <---------AGP1           <---------AHL20(2)   --------->ATHB12        --------->AGP1------>ZmHOX2a(2)   --------->ICU4     <---------MYB46(3)        --------->ARR14(2)      --------->AHL20(2)    <---------ICU4        <---------ARR14(2)   <---------AHL20(2)       -------->ATHB1               ------->MYC3        --------->ARR11(3)  <---------AHL20(1)       <---------YAB1          --------->ANAC58        <---------ARR11(3)  --------->AHL20(1)       <---------ATHB12        --------->ANAC58     ---      ----------->ARR10     <---------ARR11(3)    <---------AHL20(2)     ----------->GT1        -----  ----------->GT1  <---------CCA1(2) --------->YAB1  --------->ICU4 <--------P     <-------MYC3 <----   gcaagggtaagatctgtaatcggatctctatatatttaatcgcaataattgtttaatcattgtccgttgggtagatggtaagacatgtgtgttttgggat  14982700                                               <------NtERF2                                              --------->LBD16                                             <---------DEAR3(1)                                ------>ZmHOX2a(1)                               --------------------->WRI1                        ------>ZmHOX2a(2)    <---------ANAC46                        ===============HOX2a_HOX2a --------->GLK1(2)                       --------->GLK1(1)    <---------LBD16                      --------->ARR11(3) <---------LBD16---------->DOF2                      <---------ARR11(3) ==========================HOX2a_HOX2a                      --------->ARR14(2) ------>ZmHOX2a(2)                                        <--                  ----------->RAV1(2)   ===========================HOX2a_HOX2a               <------NtERF2                  <---------ZAT2===============HOX2a_HOX2a                              <---------DEAR3(1)                  --------->At4g35610  <---------ARR14(2)                             --------->LBD16   <------ZmHOX2a(1)  <---------ARR14(2)<------ZmHOX2a(2)                            <---------ANAC46   ============================HOX2a_HOX2a --------->LBD16                <---------TOE2(3)--------->ALFIN1 ------>ALFIN1    --------->ZAT2================HOX2a_HOX2a <------ZmHOX2a(1)       <---------LBD16 ---->ALFIN1      <---------At4g35610  --------->ARR14(2) <---------TOE2(3)        <---------ANAC46 -----ANAC46    <-----------RAV1(2) <---------TOE1(2)--------->YAB1       <---------YAB1<---------AtMYB61   gtggaggattacccaatcccagctgatctccatcctcgttcgatccggcggagaatcgtaaaggatgtgaagaaatatggttgtgatgcggaggtgtcga  14982800                                                          --------->HSFB2a(2)              -------->HAHB4                            <---------ZAT2              --------->YAB1                            --------->At4g35610             <---------ATHB12                           <---------At4g35610             <---------YAB1                            <---------MYB46(3)             --------->ICU4                           <---------DEAR3(1)                     <-------       <---------YAB1                                <---------At4g35610          --------->MYB46(3)   <---------ANAC58                        <------NtERF2--------->ZAT2           --------->ANAC46   <---------ANAC58                      <---------ANAC46<---------ANAC46        --------->ANAC58 <---------YAB1 <---------YAB1   --------->ICU4      --------->At4g35610         --------->ANAC58 -----TEIL  <---------TOE2(3)--------->At5g28300   <---------RAP2.6(2)     <---------ZAT6    --------   ttcatgcttatgctaatgataatacggtctcggtaacaatgaggcgtcaattttcggctgctggaatcaaattggaagtgttcacccaaggtgagaattc  14982900                                                                   ------>MYB46(1)                                                                   ------>MYB83                                                                 <---------MYB59                                                                 <---------MYB46(2)                                                                --------->ANAC55(2)                                                                <---------ANAC55(2)                                                              <-----------GT1                                                           <--------HAHB4                                                           --------->ATHB51                                                           --------->YAB1                                                           <--------ATHB1                                                           <---------ICU4                                                           -------->HAHB4         ----------->GT1                                                          --------->ICU4         ----------->GT1                                                          <---------ATHB51   <-----------RAV1(2)                                                          --------->AHL20(2)<---------At4g35610                                                          <---------YAB1    --------->ZAT2                                                        --------->YAB1      <---------ZAT2                      <----------DOF2                  <---------YAB1 <----------DOF2 --GLK1(1)       <----------DOF2                      --------->AHL20(2)    --------->At4g35610 ->GLK1(1) --------->MYB59                     <---------MYB46(3)<---------MYB111(1)   catttctctgaattaggctcttttctttctcttacagacgttgttgttgttgttgatataataattacctaactttgcagcaggggataaatatgcgaga  14983000  Previous    Next  AGI:  At4g30750.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30730.1) Range:  from: 14981192    to: 14982360    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g30760.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40196.1); contains InterPro domain Protein of unknown function DUF537 (InterPro:IPR007491) Range:  from: 14982528    to: 14983427    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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