Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->YAB1                                                            --------->AHL20(2)                                                        --------->AHL20(2)   --------->ARR11(3)                                                       <---------YAB1        <---------ARR11(3)           --------->ARR11(3)                        <---------ICU4         <---------CCA1(2)      --           <---------ARR11(3)                       --------->ICU4        --------->YAB1      -------         <---------AHL20(2)                         <---------YAB1    --------->ZAT6        ---------   --------->TOE2(3)               ------->TEIL  --------->ICU4  ----------->GT1            ---------   --------->TOE1(3)          <---------AtLEC2<---------ZAT6<---------AHL20(2)              ---------  ----------->GT1      <---------ATHB12  <---------REM1(1)<---------------AGL15      --------->HSFB2a(2)   aaaaacgttaataaatcttcttccaatcttgtgcatgaacttgttgtagtcttgatgattatttaaatagtaacactaatatctcttctaaaatacgaaa  14847300                                      ----------------->AGL1                             --------->YAB1 --------->HVH21                      <-----------------AGL1                          --------->YAB1 --->DOF2                            --------->ARR11(3)                               --------->bZIP60(1) >ANAC58                             <---------ARR11(3)                    <---------AHL20(2) >ANAC58              --------->ARR14(2)                      <---------MYB59         <---------bZIP60(1) >ANAC46              <---------ARR14(2)                --------------->AtSPL8      <-----------HVH21   gatgacactgaaaacagagcatcgtattcgccgttttaagacctatatcggtattcatttagtacctatttcgagttttaattctctgtcatcacaattc  14847400                 <---------ICU4                 <--------ATHB1                 -------->HAHB4                 --------->ATHB51                 --------->ATHB12                --------->ICU4                <---------AHL20(2)                <---------YAB1                <---------ATHB51           --------->TOE1(3)           --------->YAB1           --------->TOE2(3)       <---------AHL20(2)      --------->AHL20(2)      <---------AHL20(2)                              --------->HSFC1(1)   --------->AHL20(1)                                 <---------HSFC1(1)   <---------AHL20(2)                                 <---------HSFB2a(2)   --------->AHL20(2)                           <---------WOX13(1)  <---------AHL20(2)            <---------ANAC55(2)   --------->HSFB2a(2)  <---------ATHB51    <---------ANAC58        --------->ATHB12  --------->AHL20(2)  <---------ANAC58       <---------YAB1            --------->ANAC58  <---------ATHB12   --------->MYB59      ----------->GT1              --------->ANAC58           <--   acaaataatttaatcttaataattgggtctcaatacttaagtagatgttaattggtctagaaatgaagaaattaagcaattttcaaaaccaagttaatga  14847500                                                                                                 ----                                                                                           <------NtERF2                                                                                         <---------ANAC58                                                <------ZmHOX2a(1)                <---------AHL20(1)                                            ---------->DOF2                      <---------AHL20(2)                                    <------NtERF2--------->ZAT18                --------->YAB1   <---                                   --------->LBD16                             <---------YAB1    ----                                   --------->At4g35610                        --------->AHL20(2) <---                    <---------YAB1 <---------At4g35610            ------>ZmHOX2a(1)      <---------ANAC46            <---------AtLEC2      --------->RAP2.6(2)            --------->TOE2(3)       <---------ANAC58 --------DOF2  ----------->GT1    --------->DEAR3(1)    --------->YAB1      ------>ZmHOX2a(1)   -----   ctttgaggctcaatgcatggttactattctctatagccgcagacacaaaaggacactatcgtaatctcctcaatgctccttataatatttggcgtcgaat  14847600                                <---------YAB1                              --------->YAB1           <-------TEIL       <---------ICU4                                   <----------DOF2          --------->CCA1(2)   -------->HAHB4                             <---------ICU4 ----->AHL20(2)              --------->ICU4       <---------ANAC58      <---------ATHB12 ------AHL20(2)             <---------AHL20(2)    <---------ANAC58  =============================HOX2a_HOX2a ----->AHL20(1)            --------->YAB1       --------->ARR11(3)  ------------>CBF                < ------AHL20(1)           <---------YAB1        <---------ARR11(3)  ------>ZmHOX2a(2)            <--- ---->AHL20(2)     ---------->DOF2    ----------->GT1           <---------ATHB12          ------>ZmHOX2a(1)   aaattcaaatagatacacatagaaagctataataatgagagagtttataagttcttgtgaaggcaaatgatccaatctttccttttcttctcctcaaatt  14847700                        --------->ANAC58             ------->PIF5             ------->MYC3             <-------PIF5             <-------MYC3             <-------MYC2             ------->MYC2 <---------ALFIN1            <---------ALFIN1            --------->ANAC58            --------->ANAC58                                                                  <------          <---------ALFIN1--------->ANAC46                                                   <-------    <----------DOF2     <---------ALFIN1                                      <---------HSFC1(2) ----------DOF2         --------->ANAC58      *TSS   ---------->DOF2          --------->HSFC1(2) --------GT1--------->ANAC46          ----------->RAV1(1)  ---------->DOF2 ---------->DOF2<----------   ttctttcttttcccacgcgcttacacacacactgcaaaaaccacagaaacacagagaaagagaaagacaattcaaacaaaagcttcgattttttaccttt  14847800                                    <----------DOF2                      --------------->AGL15                      --------->ANAC55(2)   --------->At4g35610                      <---------------AGL15                    <-----------GT1 <----------DOF2     <-                      ----------->GT1                  <----------DOF2         <---------DAG2      <- ----DOF2 <----------DOF2    --------->ANAC58      ------>ZmHOX2a(1)     <-----------GT1           -- --DAG2   <---------DAG2     --------->ANAC58      <----------DOF2     --------->AHL20(2)        <--- -GT1 ------>ZmHOX2a(2)    ---------->DOF2       ------>ZmHOX2a(2)<---------MYB59      ------>ZmHOX2a(1)   ctgtttgatcggctttttgtttttctgtaaaaagccatcttttgtgtttgatcctttctttttttttacctgattaaacaacttttctcctctgcatttt  14847900                 <---------ANAC58                 <---------ANAC58               <---------ARR11(3)              --------->CCA1(1)          --------->AHL20(2)         --------->ARR11(3)       <----------DOF2    <---------DEAR3(2)                                                  ------- ----------->HVH21      <---------ANAC46    --------->AtLEC2                                 -------- --------ANAC58--------->ARR11(3)    <---------ARR11(3)                      ----------->GT1--------- --------ANAC58--------->AHL20(1)---------->DOF2                            --------->DAG2  --------- ------->ANAC55(2) <-----------RAV1(1)  <----------DOF2    <----------DOF2---------->DOF2 --------->MYB46(3) --------GT1  --------->RVE1(1)------>ZmHOX2a(1) <---------TOE2(3)  --------->CCA1(2)   --------->AtMYB61   ttcgtgacccttttaaatatcttgtggccggtcctaaaagttctttatgcaaaggtttcttctttataagataaacaaaaggtgaagaaaccacaaccaa  14848000                                                                                  ----------->HVH21                                                                                  --------->DEAR3(1)                                                                              <---------ZAT2                                                                           <------NtERF2                                                                          --------->LBD16                                                                        <---------LBD16                                                                        <------NtERF2                                                                       <---------RAP2.3(1)                                                                       ------>NtERF2                                                                    ------>NtERF2--------->At4g35610                                                                    <---------ATERF1(1)                                                                    <---------TGA2(2)                                                      <---------ZAT14 ==========================MYC_MYB                                           <---------ARR14(2)      --------->WRKY12------------>AtMYB77                                           --------->ARR14(2)      ----------->HVH21 >GAMYB                                  ----------->ARR10  <---------MYB52(2)--------->At4g35610 ->MYB46(3)                     <---------At4g35610   --------->ZAT14 <---------TGA1a        <------- >ANAC58                        --------->At4g35610 <---------YAB1 ----------->TGA1================== >ANAC58           ---------->DOF2     <---------At4g35610 <---------At4g35610<---------At4g35610   aaaaaaaaacttcttgttgagaaaagtttttttgagatgagagcagatttgattactatacagcaaacgctgacgccggaagcagcgacggttttaaacc  14848100                                                   ----------->HVH21                                                  ------->MYC4                                                  <-------MYC2                                                  <-------MYC4                                                  <-------MYC3                                                  ------->MYC3                                                  ------->MYC2                                                  ------->PIF5                                                  <-------PIF5                                                 --------->TGA1a                                                 <---------TGA1a                                                 --------->ANAC55(2)                                                 --------->ANAC46                                                 <---------O2                 <---------O2               <---------MYB52(1)                 --------->ANAC46          <-----------HVH21                 --------->ANAC58      <---------ALFIN1                 --------->TGA1a    --------->bZIP60(2)                 --------->ANAC58   --------->ANAC58                 <---------TGA1a    =======================bZIP_bZIP                 --------->bZIP60(2)--------->TGA1a--------->ALFIN1                 --------->O2       ----------->HVH21   <------NtERF2                         -------               <---------ALFIN1     --------->O2 --------->O2                             ------>NtERF2          --------->ANAC58          --------->ANAC46    <---------ZAT2                   --------->ANAC46     --------->At4g35610            --------->ANAC58    --------->At4g35610              ----------->HVH21 ----GT1  --------->ANAC58<---------ICU4------>NtERF2   <---------At4g35610  ------>ZmHOX2a(1)------- ==========================MYC_MYB<---------ALFIN1-------->ABF1   <---------CCA1(2)      <---------ETT(1)   agtcgattgctgaagccacacgtcgtaaccatggccacacgacaccgttacacgtggcagctactctcttatcttcttcctctggttatctccgacaagc  14848200  Previous    Next  AGI:  At4g30350.1    Description:  heat shock protein-related. similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT5G57710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66544.1); contains domain SSF81923 (SSF81923); contains domain SSF52540 (SSF52540); contains domain G3DSA:3.40.50.300 (G3DSA:3.40.50.300); contains domain PTHR11638:SF2 (PTHR11638:SF2); contains domain PTHR11638 (PTHR11638) Range:  from: 14847746    to: 14851149    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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