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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                        --------->ICU4
                 <---------ANAC46
             <---------DAG2
        ------>ZmHOX2a(1)
      <---------At4g35610
      ----------->RAV1(2) --------->TOE2(3)     ----------->HVH21
      --------->At4g35610<---------ICU4  --------->ARR14(2)                   <---------ATHB12
----------DOF2<----------DOF2            <---------ARR14(2)     --------->LBD16 --------->WOX13(1)
 
ttctttgtctcctgagccttttgtgtaaacattagtatggagagtatatggatgaccacttatgttccccaaaaactcgaaatcaatctcatcccatgta  14829600
                                                   ------->TEIL
                                                --------->ANAC58
                                                --------->ANAC58
                                               --------->SPL7
                                             <---------SPL7
       --------->CCA1(2)                   <---------------AtSPL3                       <---------ANAC55(2)
  --------->LBD16                          <---------------AtSPL8                       --------->ANAC55(2)
 --------->LBD16                           --------->ALFIN1                        ----------->GT1
--------->HSFB2a(2)                  --------->ANAC58                          --------->ANAC58<----
<---------LBD16                      --------->ANAC46                   <---------ICU4  <---------ANAC55(1)
<---------HSFB2a(2)                  --------->ANAC58   <---------AHL20(2)     --------->ANAC58<----
 
gttcccggagatttaagctacacaaattagaacatcatataagcaagtggtacgaacattttatgaaatagcaaaacatgacaagaacgttacatgttac  14829700
                          <---------ZAT6
                      <---------ZAT2
                      --------->ZAT2
                      --------->At4g35610
                      <---------At4g35610
                    <-----------RAV1(2)
                    --------->HSFB2a(2)
                    <---------HSFB2a(2)
                 --------->ARR14(2)
                 <---------ARR14(2)
               <---------DEAR3(2)                                                              -----
               <---------MYB46(3)                                --------->TOE2(3)             -----
            ------------>AtMYB77   ----------->HVH21            <---------YAB1              <-------
-----ANAC58----------->TGA1     <---------LBD16             <---------DAG2      --------->ATHB12
-----ANAC58----------->HVH21  -------->P    <-------TEIL    <----------DOF2    <---------YAB1 ------
 
ttacatagaatgttgtgacggttccagcagagttaccagggacaagtttcatttgaacttcggctttaccatagagaaactcttgattagattggaaacc  14829800
                                                                                --------->YAB1
                                                                                --------->TOE2(3) <-
                                                                      >>>>>>>>>>>>>>>>>LFY        --
                                                                     --------->ANAC46             <-
                                                                     --------->ANAC58             --
       <---------ARR14(2)                                          --------->AtMYB61              <-
       --------->ARR14(2)                 <---------YAB1    --------->MYB46(3)------->TEIL        --
      <------ZmHOX2a(1)        <---------HSFC1(2)           --------->ANAC46 <---------CCA1(2)    <-
---->TOE1(3)              --------->CCA1(2)   <---------ANAC46   <-----------HVH21                --
---->TOE2(3)   --------->ANAC58<---------HSFB2a(1) --------->GLK1(2) --------->ANAC58        <------
--GLK1(1)  <-----------HVH21   --------->HSFC1(2)  ------->TEIL --------->AtMYB61            -------
----->RAV1(2)  --------->ANAC58--------->HSFB2a(1)<---------CCA1(2)<---------ALFIN1      <----------DOF2
 
tgaaccagaggatttgtcaagcgagagagatagaagtttcccttgattatcgtgaatctttccacgaccatcaccccaatgtatcttaacgtctttgtgg  14829900
                                                                                   --------->HSFB2a(2)
                                                                              ===============HOX2a_HOX2a
                                                                              ------>ZmHOX2a(2)
                                                                             <<<<<<<<<GATA-4
                                                                             <---------GLK1(1)
  <---------ANAC46                                                           <<<<<<<<<GATA-1
 ------>NtERF2                                                               <<<<<<<<<GATA-3
--------HSFC1(2)                                                             <------ZmHOX2a(2)
------->At4g35610                                                            ================HOX2a_HOX2a
--------ZAT2                                                                 <<<<<<<<<GATA-2
------->HSFB2a(1)                                                           <---------ARR11(3)
--------HSFB2a(1)                                       ---------->DOF2     --------->ARR11(3)
------->ZAT2                   ---------->DOF2       --------->TOE2(3)      <---------AGP1      <---
--------At4g35610         --------->At4g35610       --------->ANAC58       <---------CCA1(2)    ----
------->HSFC1(2)          <---------At4g35610       ----------->GT1  <---------AHL20(2)        <----
---HSFB2a(2)         <---------GLK1(2)      --------->GLK1(2)        <---------YAB1<---------HSFB2a(2)
-->HSFB2a(2)      <---------WOX13(1) ---------->DOF2--------->ANAC58--------->AHL20(2)<------ZmHOX2a(1)
 
aagctgcctgcatagacgctgatagattgtgctgcaaagagaaagagaatcaagaacgtaaaagacttcatttttattagatctctctaggagttttgat  14830000
       ------->TEIL
  --------->At4g35610
  <---------At4g35610             ----------->HVH21
<-----------RAV1(2)           <--------P                 ---------->DOF2  <-------TEIL            <-
------ARR11(3)             <---------TOE1(3)        ----------->GT1    <---------HSFC1(2)         <-
----->ARR11(3)         <------------CBF      <-----------TBP           --------->HSFC1(2)        <--
-----GLK1(1)         *TSS  <---------TOE2(3) --------->AHL20(2) --------->CCA1(2)            <------
 
atctcagatgtatattgttgatggaatattgaggtaagtgacattagtttatataggggaaaaagagagatggaagtttcatgggtttgatcatttatgg  14830100
                                                <---------YAB1
     <----------DOF2                         --------->ICU4
 <-------PIF5                              --------->YAB1
 ------->PIF5                             --------->AHL20(2)
 <-------MYC2                             <---------YAB1
 ------->MYC2                             <---------AHL20(2)
 <-------PIF4                            --------->AHL20(1)
 ------->PIF4                            <---------AHL20(2)
 <-------MYC3                            <---------AHL20(1)                    <-------GAMYB
 ------->MYC3                    <---------GLK1(2)                             <---------At4g35610
 ------->MYC4                <---------At5g28300<---------ANAC55(2)            --------->At4g35610
--------ANAC58         <-------TEIL      --------->AHL20(2)                   <---------MYB46(3)  --
--------ANAC58       <------NtERF2      --------->YAB1   <---------GLK1(2)    <-----------RAV1(1)<--
-----TEIL      <---------LBD16  <---------ZAT2  <---------ANAC46       <---------MYB46(3)  <--------
-----RAV1(1) <---------REM1(2)  <---------At4g35610------->TEIL<---------AHL20(2)     --------->O2--
 
tgcatgtgcttttgtctactcggaggcacattcacagcttctaatataattatgtatatagattatttgattcgttgttggctgttgccaagtgaatcca  14830200
                                            --------->ATHB12
       <----------DOF2                     --------->ICU4                                       ----
------->AHL20(2)                          <---------TOE2(3)                                     ----
-------ATHB12                           --------->ICU4                                          ----
-ARR14(2)  <----------DOF2   <---------YAB1<---------YAB1                     <---------ATHB12<-----
------->YAB1 <---------AHL20(2)    ----------->GT1                       >>>>>>>>>>>>>>>>>LFY<------
 
ataaaaaactctttctttatttgtttattgttatcaaaccgaaataatgtttggacatttgtacaaaattgaatggtcccaatgttttgatatgtcaaca  14830300
                       --------->MYB52(1)
                   ------>NtERF2
                  --------->DREB2C(2)
                  --------->DEAR3(1)
                 --------->ORA47(2)
                 --------->DEAR3(2)
                 --------->DEAR4(2)
                --------->SPL7
                <---------ATERF1(1)
               <---------ALFIN1
         <---------ANAC58
         <---------ANAC58                                                --------->ARR14(2)
      <----------DOF2<---------MYB46(2)                           <------ZmHOX2a(1)
----->ANAC46  <---------ZAT14                        --------->ZAT6      <---------ARR14(2)        <
----->ANAC58  <---------ABI4(2)                     --------->ZAT14     <----------TaMYB80         <
----->ANAC58  --------->ZAT14             <---------ARR11(3)    <---------TOE2(3)                  <
----ALFIN1    --------->ZAT18      --------->At4g35610   <-----------------AGL1                  ---
---REM1(2)    <---------ZAT18 --------->YAB1        <---------ZAT14   --------->YAB1          ------
 
cggcttcgactttcgagcgcaccgcctaactaatgagaagctcaagatgtctgagaacactccgaatgaggaagcatattcgacaatcgacatcatccga  14830400
                                                 <---------GLK1(2)
    <-----------HVH21                          --------->ICU4
---------ANAC46                         ---------->DOF2
---------ANAC58              <---------------------WRI1
---------ANAC58              >>>>>>>>>TAC1   ---------->DOF2    --------->ANAC55(2)
--->NtERF2      ----------->GT1        ------->GAMYB <-----------RAV1(1)                       -----
--->At4g35610--------->MYB52(1)       --------->MYB46(3)     <----------DOF2        ---------->DOF2
 
tgccttgtgtcagacaaaacagcaaaaacgacagtgtttcaaccaaagaaaagattgtgttgggcttaagtgattcagacccaaaccaaaagaagcccat  14830500
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AGI:  At4g30290.1   
Description:  ATXTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19); hydrolase, acting on glycosyl bonds. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 19 precursor (XTH19) [Arabidopsis Thaliana] (GB:Q9M0D1;GB:Q94A49); similar to ATXTH18/XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G30280.1); similar to xyloglucan endotransglycosylase 1 [Fagus sylvatica] (GB:CAA10231.1); similar to xyloglucan endotransglucosylase/hydrolase 2 [Cucumis melo] (GB:ABI94062.1); similar to putative xyloglucan endotransglycosylase [Cucumis sativus] (GB:CAD87535.1); contains In
Range:  from: 14828718    to: 14830022    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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