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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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          --------->ANAC58
          --------->ANAC58
         --------->SPL7
         <-------TEIL
         ------->TEIL
       <---------SPL7
      <---------ANAC46
     <---------------AtSPL3
     --------------->AtSPL3
 --------->YAB1
 <--------HAHB4
 --------->ATHB12
 <---------ICU4
<---------YAB1                                                               <---------YAB1
<---------ATHB12                                                          <---------AHL20(2)
--------->ICU4                                                       <---------ARR11(1)
------->YAB1                                  <---------ARR11(3)     <---------ARR14(2)
--------ICU4                                  --------->ARR11(3)     --------->ARR14(2)
------>ICU4       --------->ANAC46           <---------CCA1(2)       ------->TEIL
-AGL15<---------ANAC55(2)                  --------->AHL20(2)       <---------ARR14(1)           ---
>AGL15<---------ANAC58                     <---------AHL20(2)       <---------CCA1(2)            ---
--AGL1<---------ANAC55(1)             <---------TOE2(2)           --------->ANAC55(2)           <---
->AGL2--------->ANAC55(2)       <---------ETT(2)                  <---------ANAC55(2)          -----
--AGL3<---------ANAC58          --------->ETT(2)      <---------GLK1(1) <----------DOF2        -----
 
ataatcattacgtacgcatacacatagccacgatgtctacctatgtttaaatctttgaattctgaaactacgtatcttttatttttgtttaaaaaaaacc  14643600
          <----------DOF2
    --------->ARR14(2)
    ------->TEIL
    <---------ARR11(1)
    <---------ARR14(2)
    <-----------ARR10
   <---------CCA1(2)
   <---------ARR14(1)
 <---------ANAC58
 <---------ANAC55(2)
 --------->ANAC58
 --------->ANAC55(2)                                                        <---------ARR11(3)
 --------->ANAC58                                                           --------->ARR11(3)
 <---------ANAC58                                                      <---------YAB1
--------------->AtSPL8                         ------>ZmHOX2a(2)       <---------WOX13(1)
------>TOE1(1) ------>ZmHOX2a(1)               ----------->GT1       --------->ATHB12
------>TOE2(1)--------->TOE2(3)             <------ZmHOX2a(1)        -------->HAHB4
------------AtSPL3                        <---------TOE2(3)          ----------->GT1
---------------->WRI1                     <---------TOE1(3)         --------->ICU4
---->TOE1(2)  <---------------AGL15   <----------DOF2               <---------ATHB12      <---------GLK1(2)
 
tagtacgtatcttctttccttacttagacatcatcttctaactttaaggatcgaaattagaagaaaaacaaatgattaatatctacaagaacagaatttt  14643700
                   --------->HSFB2a(2)
          <---------ARR14(2)        --------->AHL20(2)
          <---------GLK1(2)         <---------AHL20(2)                                    <---------
          --------->ARR14(2)        --------->AHL20(1)    --------->ANAC46                ----------
        ----------->ARR10        --------->YAB1           --------->ANAC58               -----------
 --------->YAB1    <---------HSFB2a(2)                    --------->ANAC58   <---------ZAT14     <--
 
gcatttatactcagatactcttctagtacctcacaaaaataaaatgaaattggaattgaacacgccctaaattcaagtactatacggtctatacccattt  14643800
                                      --------->ANAC58
                                      --------->ANAC58
                                     <-------TEIL
                                    --------->CCA1(2)                                      ------>ZmHOX2a(2)
<---------ARR14(2)                  --------->ARR14(1)                                    <---------GLK1(1)
--------->ARR14(2)                 --------->ARR14(2)                              <---------ARR14(2)
------AGL15                        <---------ARR14(2)                              <---------GLK1(2)
----->AGL15                        --------->ARR11(1)                              --------->ARR11(3)
------>AGL1              ---------->DOF2        <----------DOF2    <----------ID1  --------->ARR14(2)
-------ANAC46      <---------YAB1----------->ARR10   <----------DOF2    ---------->DOF2  --------->ARR11(3)
 
gagtatatgaataatgcatattgtgagtgaaagagatagatacgatacactcttttctttgtttttcaattggacaaaaggaaacagattttgatctctg  14643900
                                               <-------PIF4
                                               ------->MYC2
                                               ------->PIF5
                                               ------->PIF4
                                               <-------MYC4
                                               ------->MYC3
                                               <-------MYC2
                                               <-------MYC3
                                               <-------PIF5
                                              <---------TGA1a
                                              --------->O2
                       --------->AHL20(2)     --------->TGA1a
                       <---------AHL20(2)     ======================================bZIP_DOF
                       --------->ATHB51       <---------O2
                       <---------ICU4       <------------OsbHLH66
                      <---------YAB1      ------>ZmHOX2a(2)
                      --------->ICU4     <------ZmHOX2a(2)
                    --------->YAB1      --------->ARR14(2)
                   <---------YAB1       <---------ARR11(3)
                   <---------AHL20(2)   <---------ARR14(2)                                     <----
                   --------->AHL20(2)   --------->ARR11(3)                                    <-----
             ------>ZmHOX2a(2) <------ZmHOX2a(1)                                            --------
             ----------->GT1<-----------RAV1(2)------->MYC4                                 ------>NtERF2
             =========================HOX2a_HOX2a                                         --------->TOE1(1)
            <------ZmHOX2a(2)  ==================HOX2a_HOX2a                         --------->ARR14(2)
            ==========================HOX2a_HOX2a                                    <---------ARR14(2)
           --------->ARR11(3)  =================HOX2a_HOX2a                          --------->ARR11(3)
           <---------ARR11(3) --------->LBD16<---------TOE1(2)           <----------DOF2 ------>ZmHOX2a(1)
      --------->WRKY18(1)   <---------LBD16 <---------ALFIN1    <-----------HVH21----------->TBP
 
aattgaacggtcaagatcgtatataattatttcaggagattaagatcccacgtgcttaaaaactctctgtcagactctttatgtataaaatcctcggccc  14644000
                                                                                    --------->ANAC58
                                                                                  ---------->DOF2
                                                                                --------->ANAC58
                --------->ANAC58                                         --------------->AGL15
                --------->ANAC46                                         <---------------AGL15
                --------->ANAC58                                        ----------------->AGL1
              *TSS                                                      ----------------->AGL2
             <---------ZAT18                                            ----------------->AGL3
             --------->ZAT14                                            <-----------------AGL2   <--
             <---------ZAT14                    <------ZmHOX2a(1)   --------->HSFB2a(1)          <--
         <---------------AtSPL8             ---------->DOF2         <---------HSFB2a(1)      <------
-----ALFIN1  --------->ZAT18        ---------->DOF2 --------->MYB52(1) ------>MYB83 --------->ANAC58
----ZAT18--------------->AtSPL8 ---------->DOF2<----------ID1<-----------GT1    --------->ANAC58 <--
->PCF2<---------YAB1    ---------->DOF2 ---------->DOF2----------->GT1 ------>MYB46(1)     <--------
 
actcttgttttgatagtacactcaatagaaagacacaaagaaagaaagaaaggacaaacagaaataacaaaaccttccatttcaagaaagcatcatcttt  14644100
                  ------>ZmHOX2a(2)
                 <------ZmHOX2a(2)
                <---------AGP1
                --------->ARR14(3)
                <-----------ARR10                                        <---------ARR11(3)      ---
    --------->LBD16                                                      --------->ARR11(3) <-------
-------ANAC46   <---------ARR11(3)                              --------->LBD16             <-------
-------ANAC58   --------->ARR14(2)                             --------->HSFC1(1)          <-------TEIL
----DOF2        <---------ARR14(3)                             --------->HSFB2a(2)      <---------At4g35610
-------ANAC58   <---------ARR14(2)                             <---------HSFB2a(2) ----------->HVH21
-YAB1           --------->ARR11(3)  <---------ICU4--------->TOE2(3)--------->GLK1(2)  <-----------RAV1(2)
 
gtgtgtccgaaaaatggaagatctcgaccatgagtacaagaattactgggaaaccacaatgttcttccagaatcaagaactcgaatttgacaggtgctta  14644200
                                                                              <---------AHL20(2)
                                                                              --------->AHL20(2)
                                                                             --------->ICU4
                                                                             <---------YAB1
                                                                        <------MYB46(1)
                                                                        ----------->GT1
                                                                        <------MYB83
                                                                 <---------------AGL15
 --------->ARR11(3)                                              <----------DOF2              <-----
 --------->GLK1(2)                                              <---------ANAC58  --------->YAB1  --
<---------GLK1(2)              <----------DOF2                  <---------ANAC58<---------TOE2(3) --
------>HSFB2a(2)           ---------->ID1                       <XXXXXXXXXXXXXXXXXXXXMIR832-3P------
--ANAC58            <------------------------ANAC81 --------->ICU4  --------->MYB52(2)    <---------YAB1
--ANAC58      <---------AHL20(2)                  ---------->DOF2--------------->AGL15  ----------->GT1
 
ctagaatcttggtccattttttttttttttgtttctttagtttttttttccgataaagattaatcttgctttagttggtaattaatgaaaattgttataa  14644300
                                                                                 <------NtERF2
                                                                                ------>NtERF2
                                                                                <---------ATERF1(1)
                                                                               <---------DEAR3(1)
                                                                               <---------ATERF1(2)
                                                                               --------->ATERF1(2)
                                                                               --------->DEAR3(1)
                                                                              <------NtERF2
                                                                              --------->RAP2.3(1)
                                                                              --------->ATERF1(1)
                                                                             <---------ATERF1(1)
                                                                             <---------RAP2.3(1)
                                                                            --------->DEAR3(1)
                                                                          <-----------HVH21
                                                                         =====================bZIP_DOF
                                                                         --------->O2
                                                                         --------->TGA1a
                                                                    --------->RAP2.6(2)
                                          --------->LBD16         <---------At4g35610
                                          ------>NtERF2           --------->At4g35610
                                        <---------LBD16       --------->ANAC46<---------LBD16
                                      --------->ARR14(2)    --------->MYB52(1)--------->DEAR4(2)
  <---------AHL20(2)              <---------ANAC46         ----------->HVH21<---------DEAR3(1)
 --------->AHL20(2)              <---------LBD16       --------->ANAC58  --------->bZIP60(2)
----AHL20(2)                   <---------ARR14(2)      --------->ANAC58<---------DOF5.7(2)
------->YAB1                   --------->ARR14(2)     --------->ZAT18<------NtERF2 <----------DOF2
------->AHL20(2)        <------ZmHOX2a(1)<---------ANAC46  <---------SPL7<---------O2
--->AHL20(2)   ----------------->AGL1 <---------ARR14(2)  <-----------RAV1(2)------>NtERF2
 
attataaaatttaagttggccgatggaggaagcgttttcgggttccggcgagtcgagttcgccagacggagcggcaacgtcgccggcttcttcgaagaac  14644400
                                                                                    --------->AHL20(2)
                                                                                    <---------AHL20(2)
                                                                                 ----------->GT1
                                                                                 --------->ATHB12
                                                                <---------------AGL15
                                                               ----------------->AGL3
                                                               ----------------->AGL2
                                                               ----------------->AGL1   -------->HAHB4
                          --------->TOE2(3)                    ----------------->AG<---------WOX13(1)
                          --------->TOE1(3)             <---------At4g35610     <---------YAB1
                   <------NtERF2--------->YAB1      <---------MYB52(1)     --------->ANAC58
                 --------->ANAC46                   <-----------HVH21  --------->ANAC58 <---------ICU4
                 --------->ANAC58                  --------->LBD16     --------->ANAC46<---------ATHB51
                 --------->ANAC58                <---------LBD16--------------->AGL15  --------->ICU4
                --------->RAP2.6(3)        <-----------GT1<---------MYB46(3)    --------->ICU4
               --------->MYB52(1)      <----------DOF2  <-------GAMYB  --------->ANAC58<---------YAB1
     --------->LBD16  ---------->DOF2  <---------DAG2  --------->MYB52(2)  --------->ANAC58    <----
 
gttgtctccgagagaaacagacggcaaaagcttaatcagagactttttgctctccggtcagttgttcccaatataagcaaggtatgattaattattccat  14644500
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AGI:  At4g29930.1   
Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G57150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69579.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598)
Range:  from: 14644015    to: 14647597    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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