Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ------->GAMYB                                            ----------->RAV1(1)                                            <---------ALFIN1                                           --------->MYB46(3)                                          ------>MYB46(1)                                          ------>MYB83                                        <---------MYB111(1)                                        --------->MYB46(3)                                  --------->ARR11(3)                                  --------->ARR14(2)                                 --------->At4g35610                                ----------->ARR10                            --------->YAB1-------->P                            XXXXXXXXXXXXXXXXXXXX>MIR842                           <---------YAB1--------->MYB55(1)                         --------->YAB1 --------->AtMYB61                         -------->HAHB4 <---------MYB46(2)                     <---------YAB1     --------->DEAR3(1)                              <------------                --------->HSFC1(2)--------->AGP1                                        -------------                <---------HSFC1(2)<---------ARR14(2)                         --------->ARR11(3)                --------->HSFB2a(1) --------->MYB46(3)                       --------->ARR14(3)      <---------ARR11(3)<---------ATHB51<---------MYB111(2)                  <---------ARR14(3)      --------->ARR11(3)--------->ICU4  <---------MYB55(2)                   <---------ARR11(3) ->ARR14(2)     <---------HSFB2a(1)<------ZmHOX2a(2)<---------ZAT6           --------->ARR14(2) ->AGP1 ------>ZmHOX2a(2)<---------ICU4--------->MYB46(3)                    --------->GLK1(2)   ----   acagaaatgatcttaagaaggttctaattatgatcagatccaccaaccacattacagttaatgcattcaaactcaacaaaatcttcatatgcagtacaaa  14594900                                                  <------ZmHOX2a(1)                                             --------->SPL7                                            ------>MYB83<------ZmHOX2a(1)                                            ------>MYB46(1)                                            --------->MYB52(1)                                          --------->MYB46(3)              --------->ZAT6              <---------MYB52(2)            ------>MYB46(1)               <---------MYB55(2)     --------->YAB1                       <---------MYB46(2)    <<<<<<<<<ARR2                         --------->DEAR3(1)    <---------ATHB12                     --------->ANAC58                                  -------->HAHB4  --------->WOX13(1)                     --------->ANAC58                                  --------->ATHB12 ---AtSPL8  ------>MYB83              <---------At4g35610                                 <---------YAB1 -->AtSPL3<---------MYB59             --------->At4g35610                                 --------->ICU4 ----->AHL20(2)             ----------->GT1<---------SPL7                                 <---------ATHB12   taaacaatcaaacctaacactcgcgaaattcagtaaaatcagcaccgaacgaggaagaggaaagacttacgacttcaggctccaattgagaaatgattcg  14595000                               ------>ZmHOX2a(1)                              --------->TOE2(3)                              --------------------->WRI1                              --------->TOE1(3)                       ===============HOX2a_HOX2a                       ------>ZmHOX2a(2)                       =====================================HOX2a_HOX2a                      --------->GLK1(1)                      <------ZmHOX2a(2)                      <---------GLK1(1)                      ================HOX2a_HOX2a                     <---------AGP1--------------->AtSPL3                     --------->ARR14(2)                     <---------ARR14(2)                     <---------ARR11(3)                     --------->ARR11(3)                     --------->ARR14(3)     <----------DOF2                     <---------ARR14(3)--------->SPL7                    <---------CCA1(2)  ------->TEIL                   ----------->ARR10 <---------SPL7  ------>ZmHOX2a(1)          ------>ZmHOX2a(1)                --------->ANAC46   <---------------AtSPL3                    ------>ZmHOX2a(1)                <---------ANAC55(2)--------------->AtSPL8              <---------DAG2   aactccatccttgttaacacgtagatctccatccttaaacgtaccgctttgagtcctacagagagaaccaaaacctttcctccttcaaaaacaaaaccag  14595100                                                                                                -----                                                                                              -------                                                                                              <------NtERF2                                                                                             --------                                                                                             --------                                                                                             ------>NtERF2                                                                                             --------                                                                                            <--------                                                                                         --------->ANAC58                                             ---------->DOF2                             --------->ANAC46                                        --------->AtLEC2             <------ZmHOX2a(1)   --------->ANAC58                 <-------TEIL        <-------TEIL                <-------TEIL       <---------WOX13(1)          --------->ANAC46          <------ZmHOX2a(2)   <---------HSFB2a(2)     <---------WOX13(1)          --------->ANAC58         --------->AGP1       --------->HSFB2a(2)<------MYB83<---------ANAC58          --------->ANAC58         <---------ARR14(2) <------ZmHOX2a(2)    <------MYB46(1)  ---------        <---------ALFIN1           --------->ARR14(2) ======================HOX2a_HOX2a<---------ANAC58   agacatttccacacacaaatacatctatctatccacagatccatggagaaagagagatcgagaaacatacaggaatttggtgatggattgctcgccagca  14595200       <---------ANAC58       <---------ANAC58   <---------GLK1(1)         <<<<<<<<<GATA-3                                                        -  --------->ARR14(2)         <<<<<<<<<GATA-2                                                        < <------ZmHOX2a(1)           <<<<<<<<<GATA-4                                                      *TSS ------>RAV1(1)              <<<<<<<<<GATA-1                                                     ---- -->At4g35610      --------->ATHB12                                                         <-------- ->ANAC58          <---------ICU4                                                 ---------->ID1<---- ->ANAC46 --------->ZAT2    --------->ARR14(2)                                  <-----------RAV1(1)<- ->ANAC58 <---------ZAT2    <---------ARR14(2)                              <----------DOF2--------->ANAC46 -ATERF1(2)       --------->ICU4   <----------DOF2                          <---------DAG2------>ZmHOX2a(1) >ATERF1(2)       <---------YAB1  <---------DAG2            <------------------------ANAC81--------->bZIP60(2)   acaggaattgcgagcttgagattattgctgaatccacctttcttcatcgtcttcgtctacttcgttcttcgcttcttcctttttgttgtttcctcgtcat  14595300                                                                                                    <                                                                                                    <                                                                                               ------                                                                                               ------      <---------ANAC55(2)                                                                      ------      ----------->GT1                                                                <---------TOE2(3) -------->AHL20(1)                                                                   <---------YAB1 - ---------AHL20(1)                                                                 --------->AHL20(2) ----->AHL20(2)                        <---------DAG2                              <---------AHL20(2) ---TGA1                             ------->TEIL   <------------CBF           --------->AHL20(2)   - -----YAB1                       --------------->AtSPL8             --------->AHL20(2)      --------- --------------AGL15     --------->YAB1<----------DOF2        ----------->GT1 <---------MYB52(1)    <   tatatattaagtaaaacacagttttaagcataattcatgtacttttcagccagaaattggaatttggaaataaaacagccattaattaatattagtcaag  14595400                    --------->MYB46(3)                              <---------WRKY18(1)       --------->ANAC46                                            --------->WRKY38(1) -------MYC3       ------>MYB46(1)                                 ----------->HVH21 -------MYC4       ------>MYB83                                    --------->WRKY45 --->ANAC58       --------->MYB52(1)                               --------->WRKY12 --->ANAC58     --------->MYB46(3)                        --------->LBD16 --->AtLEC2   <---------WRKY18(1)                        --------->LBD16 ------>MYC2 --------->WRKY38(1)                       <---------LBD16     --------->DAG2         --- ------>MYC3 --------->WRKY45                         <-----------GT1 -------->ZAP1               --- >WRKY18(1)  --------->WRKY12            <-----------GT1<---------LBD16   ---------->DOF2       <---- -------MYC2--------->DOF5.7(2) <----------DOF2   <----------DOF2<----------DOF2              <------   cacatgttcacgacgttgaccaacgacttagagactttcccatttactacttctttttcccggttttctttgaccgaaaagttttaatccacattttaac  14595500                                                                                     ---------->DOF2                                                                                     <---------DOF5.7(2)      --------->MYB52(1)                                                             --------->MYB52(1)     --------->MYB52(1)                                                          --------->ANAC58   <---------MYB52(2)                                                            --------->ANAC58 ------>LBD16                          <----------DOF2         XXXXXXXXXXXXXXXXXXXXX>MIR850 -------->GT1   XXXXXXXXXXXXXXXXXXXX>MIR870          --------->ZAT6       ----------->RAV1(1) -----LBD16<---------MYB52(1)    <----------DOF2   <-----------GT1       --------->REM1(1) -----GT1----------->GT1      <---------MYB52(1)  <-----------GT1   --------->ZAT6 --------->DOF5.7(2)   cggaaacaaaccggttaattcagtgattcttcgttctttagcttttggtttttaaacactcccaaaatcaccactacaacaaaacgctaacgcagaatgc  14595600                  --------->HSFB2a(2)                  <---------HSFB2a(2)                                                   <----------DOF2                <---------AHL20(2)                                                     <---------ICU4            --------------->AGL15                                                    <---------ARR11(3)            <---------------AGL15                                                    --------->ARR11(3)    <---------TOE2(3)                                                           --------->At5g28300    <---------TOE1(3)                                                          ----------->GT1   --------->MYB52(1)                                                     --------->MYB46(3) <---------MYB52(2)                                           --------->YAB1--------->MYB52(1)  <----   caaactaacgtttgatatttatagaaagttttcaatatttcaaatattgtttgatcaaatacaataaacacatataacaaacagtaaaatctttacttat  14595700                                             ---------->TaMYB80                                             <---------KAN4(2)                                         --------->ANAC46                                         --------->ANAC58                                         --------->ANAC58                                  --------------->AGL15         --------->ANAC46 -----YAB1 <---------YAB1         <---------------AGL15       <---------ALFIN1 <-----------GT1   gtttctcggtttcatgtttgaagataacaaggttttcttcaacaaggaatatacaaataagcatacacccctatatttgttttactcatgtatacattca  14595800  Previous    Next  AGI:  At4g29810.1    Description:  ATMKK2 (MAP KINASE KINASE 2); MAP kinase kinase/ kinase. Identical to Mitogen-activated protein kinase kinase 2 (MKK2) [Arabidopsis Thaliana] (GB:Q9S7U9;GB:O80395); similar to MEK1 (mitogen-activated protein kinase kinase 1), MAP kinase kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G26070.3); similar to MEK1 (mitogen-activated protein kinase kinase 1), MAP kinase kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G26070.2); similar to double MYC-tagged mitogen activated protein kinase kinase 2 [synthetic construct] (GB:ABF55662.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein k Range:  from: 14593045    to: 14595298    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g29820.1    Description:  ATCFIM-25/CFIM-25 (ARABIDOPSIS HOMOLOG OF CFIM-25). similar to protein binding [Arabidopsis thaliana] (TAIR:AT4G25550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65309.1); contains InterPro domain Cleavage and polyadenylation specificity factor, 25 kDa subunit (InterPro:IPR016706) Range:  from: 14595686    to: 14597487    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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