Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <-------TEIL                                         ------->TEIL                                     <---------------AtSPL3                                     --------->MYB59                              --------->At4g35610                              --------->ZAT2                              <---------ZAT2                            <---------------AtSPL8                            <-----------RAV1(2)                         --------------->AtSPL8                           <---------ZAT18                          <---------AHL20(2)          -----                           --------->ZAT18                          --------->AHL20(2)          -----            <----------DOF2<---------ZAT14   ------->TEIL    --------->ZAT6            <---------YAB1 ---->YAB1 <---------DAG2  --------->ZAT14--------->ANAC55(2)<-----------GT1     --------->AHL20(2) -------AGL15  <---------YAB1 <---------At4g35610  <---------WOX13(1)<---------YAB1    <XXXXXXXXXXXXX   agagtcacaatcaccttttgattatgtagtgcagctggttatgtacgtatgtgaatgacattaacaccattttaatagtacaattcaatatgatcaacta  14507000                                                                                     --------->ZAT6              --------->GLK1(2)                                                     <---------TOE2(3)              <---------ARR11(3)                                    --------->AHL20(2)              --------->ARR11(3)          --------->AHL20(1)        <---------AHL20(2) ---->ANAC58 --------->CCA1(1)            <---------AHL20(1)       <---------YAB1 <---------ICU4 ---->ANAC58 --------->RVE1(1)            --------->AHL20(2)  ----------->GT1    --------->ICU4 XXXXXXXMIR841B* <---------YAB1     <-----------GT1      --------->YAB1     ----------->GT1   gcaatttgttgaaaaaaatcttatagttttcatctatataacaatataatataaaactatcaaaatgttattaattaagagtaattaagactattgagcc  14507100                           --------->ETT(2)                  <------------CBF                    <---                           >>>>>>>>>>AtTINY2      <-------TEIL  --------->YAB1               <-------             <---------ICU4<---------ETT(2)    <---------MYB46(3)  ---------->DOF2          <--------   <-----------GT1     <---------YAB1    ---------->DOF2   <---------YAB1              <-----------HVH21   atattttacatctcttcattacattactatcgacatggttttgaaaagatggttcatgagtcttattgataaagaattttaagagtcacagtcacctttt  14507200                                                                                         --------->ANAC46                                                                                    --------->O2                                                                                    --------->ANAC46                             <------------CBF              ----------->GT1          --------->bZIP60(2)                           <---------YAB1<---------ANAC46 --------->DAG2            --------->ANAC58                        <-------MYC4     --------->ANAC55(2)                   --------->bZIP60(2)                        ------->MYC3     <---------ANAC55(2)  ------------>CBF ----------->HVH21                        <-------MYC3    <---------TOE2(3) --------------->AtSPL8    --------->ANAC58                        ------->MYC2 <---------WOX13(1)   <---------------AtSPL8    --------->TGA1a                 <-------GAMYB<---------WOX13(1)         ---------->DOF2       --------->ANAC58                <------MYB83--------->ATHB12             ================================bZIP_DOF                <---------MYB46(3) --------->ATHB12   --------->YAB1           --------->TGA1a                <------MYB46(1)   <---------YAB1 ------------>CBF              --------->O2<---------REM1(2) ------AHL20(2) <---------DEAR3(2)>>>>>>>>>>>>WRKY18  --------->AHL20(2)       --------->ANAC58 ---DOF2       <---------DEAR3(1)<---------TOE2(3) --------->WOX13(1)          --------->ANAC46 -DAG2 <---------ANAC46 <-------MYC2<------------CBF <---------ATHB12        --------->ANAC46   tattttgttttgtagagtcggttgcacatgtgattgacgattgacgtaaacaccaattaaaaagtacaattctatatgcacacgacacgacacaacacgg  14507300                                                                                   --------->LBD16                           ------>ZmHOX2a(1)                                      --------->ANAC46                        ------>ZmHOX2a(1)                            ------------>CBF  ---------->DOF2                       <---------ALFIN1    ------------>CBF      --------->ANAC46 ----------->GT1              --------->ARR11(3)       <----------DOF2    --------->AHL20(2)   -------->P ----------->TBP<------------CBF       <---------DAG2   --------->TOE2(3)  <-----------GT1       ----   gctataaataagttaagacattgctcctcctcttctcatcacttttccaatctctcaacataaaatcccacaacaattcacaacccgaaaaaagacagag  14507400                                                           <-----------GT1                                                         <-----------HVH21                                                        <----------DOF2                                                      --------->ABI4(2)                                                      ------>NtERF2                                                    <---------ZAT18                                                   <---------RAP2.3(1)                     --------->TOE2(2)                                                  --------->ANAC46                         --------->TOE1(2)                                                  <---------DEAR3(1)                      <---------ANAC58                                                 --------->SPL7                        --------->WOX13(1)                                                ------>ZmHOX2a(1)               <------NtERF2    ----                                            --------->GLK1(2)                   --------->At4g35610                                            --------->ARR14(2)                  <---------At4g35610                              --------->YAB1<---------ARR14(2)                <---------ZAT18    <---       --------->DEAR3(1)    <---------ATHB12  --------->TOE2(2)        --------->TOE1(3) <---------ANAC58      --------->ATERF1(1)  --------->WOX13(1)  --------->TOE1(2)        --------->TOE2(3)<---------ATHB12 -------->CBF     <----------DOF2          <---------GLK1(2) --------->ANAC46 --------->ZAT18<-------   acaatggcacagcccatgcgcttcatgctcaatcatatagaaacagaatcctacggcgctttcacccctcaaaaccttagtccgctgatcaatcgtgcga  14507500                                                      --------->YAB1                                             <------NtERF2                                            <---------DEAR3(2)                                          --------->ATERF1(1)                                          <---------MYB52(1)                                         <---------ATERF1(1)                             ----------->RAV1(2)     <------ZmHOX2a(2)                             --------->At4g35610    --------->ARR11(3)                             <---------ANAC55(2)<------NtERF2     <---------HSFB2a(1)                          <------ZmHOX2a(2) ------>NtERF2         --------->HSFB2a(1)                          ================================HOX2a_HOX2a       <---------ANAC58                         <---------ARR14(2) <---------SPL7        <---------HSFC1(2)                         <-----------HVH21<------NtERF2           --------->HSFC1(2)                 --------->ARR14(2)      <-----------HVH21       <---------ARR14(2)           <---------At4g35610    <---------ANAC58  <---------ARR11(3)      <---------ANAC46    <---------ALFIN1     --------->ARR14(2)<---------DEAR3(1)    --------->ARR14(2)  --------->ANAC46     --------->LBD16  --------->DEAR3(1)   <XXXXXXXXXXXXXXXXXXXXMIR399A  <---------ALFIN1   <---------LBD16   --------->ATERF1(1)  <-----------HVH21 <------NtERF2        -- ----->ARR14(2)  <-----------ARR10<---------ANAC58  --------->ARR14(2)      <---------ANAC58    <---- ------ARR14(2) <---------CCA1(2) <---------ANAC46  <---------ARR14(2)     ---------->ID1       ----- --TOE1(2) --------->At4g35610  <-----------HVH21  <------ZmHOX2a(1)   <----------DOF2    <----------   ttccacacactcgagctcaaatctccggatcacctgtcgtagccgtcggccgaggatcatcaggtcggaccttctttggcgtcaatgtggaattaccagg  14507600                         <---------SPL7                        --------->DEAR3(1)                      ------>NtERF2                     --------->ANAC58               --------->ANAC46                     --------->ANAC46              --------->DEAR3(1)                     --------->ANAC58       -------->P            --------->ANAC58                ------>MYB83            --------->ANAC58                ------>MYB46(1)            --------->ANAC46               ------>NtERF2          --------->AtMYB61                <---------ALFIN1          <---------ALFIN1                --------->DEAR3(1) --------------------->TaNAC69(2)      --------->ANAC58                                        ------ -----ARR14(2)     <---------ALFIN1    --------->ANAC58      --------->HSFB2a(2)              ------- ---->ARR14(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------HSFB2a(2)             -------- -GT1  <---------WRKY18(1)             --------->ANAC46<---------ALFIN1                     <--------   tctgcctcttgaccactccatccacgccgaacagttccttctcgccaacctcgccctccacttcgagcaaaaactcgaatgcatagccatctccactaac  14507700                                                                                              <------                                                                                         ------>MYB46(1)                                                                                       --------->MYB46(3)                                                                                       <---------MYB59                                                                                      --------->ANAC58                            --------->ZAT2                                            --------->ANAC58                            --------->At4g35610                                      ------->TEIL                      ------>NtERF2 <---------ATHB12                              --------->ANAC58         <---------HSFB2a(2)<---------At4g35610                         <---------ARR14(3)-------->P         <---------LBD16<---------ALFIN1                                <---------ARR11(3)------>MYB46(1)         ==============================RAV                              <-----------ARR10------>MYB83         --------->HSFB2a(2)<---------ZAT2                              --------->ARR14(3)--------->MYB52(1)         <-----------RAV1(2)--------->ZAT14                             --------->ARR11(3)------>MYB83 --->RAP2.6(3)       --------->RAP2.6(2)                --------->CCA1(2)         --------->ANAC58 -->MYB52(1)      --------->AtLEC2--------->WOX13(1)   <---------ARR11(3)         --------->ANAC46 -- --->HVH21  <------ZmHOX2a(1)  ------>NtERF2 --------->AHL20(2)         --------->GLK1(2)--------->MYB52(1) -MYB52(2)--------->LBD16  <-----------RAV1(1)         --------->ARR11(3)         <---------MYB52(2)   ggctactacttccaggagccatgcggccactgctgccaattacttcataaaatcagagatatgtctgataccaaaatcttgctcacgaacccaaccggtc  14507800                                      --------->ICU4                                     --------->ANAC58                                     --------->ANAC58                                  --------->LBD16                                   --------->DOF5.7(2)                                 --------->ANAC58                                  ------------------                                 <---------HSFB2a(2)                               --------->TOE1(3)                                 --------->HSFB2a(2)                               --------->TOE2(3)                                 --------->ANAC58   --------->ANAC58               <----------DOF2                                 --------->ANAC46   --------->ANAC58            --------->ARR14(2)         <-------TEIL           <---------LBD16     --------->ANAC46            <---------ARR14(2) -----HVH21                ------>MYB83            --------->LBD16      <---------HSFB2a(2) -------->DOF2 ------->TEIL------>MYB46(1)        <-----------RAV1(2)   --------->HSFB2a(2)   agaaaggaacatacatgaatctttcgaccttccttccgcaaggattaatctcccaggcaaacgtccctcgccttctcgagcggaactttaactgcatcga  14507900  Previous    Next  AGI:  At4g29570.1    Description:  cytidine deaminase, putative / cytidine aminohydrolase, putative. similar to cytidine deaminase, putative / cytidine aminohydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G29580.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ49633.1); similar to Os01g0712700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044051.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125); contains InterPro domain Cytidine deaminase-like; (InterPro:IPR016193); contains InterPro domain Cytidine deaminase, homodimeric; (InterPro:IPR006263); contains InterPro domain Cytidine and deoxycytidylate deaminas Range:  from: 14507404    to: 14508488    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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