Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <-----------RAV1(2)                                   <---------HSFB2a(2)       ------>ZmHOX2a(1)      <-----------RAV1(1) ----------->RAV1(1)                   ------------>CBF ---->MYB46(1)        --------->DAG2            <---------At4g35610      <---------AHL20(2) ---->MYB83--------->ZAT14  <----------DOF2     --------->At4g35610      <---------AHL20(1)        <- ------MYB59         ---------->DOF2   ----------->ARR10                 --------->AHL20(2)    <-----   caaactctccttcttcactctgagaaagtgctttgttggagaagaattgcagcaccagaagaagcactagtacaaaaaatttcatcgttttgcaattctt  14316900                                                                         <------ZmHOX2a(2)                                                                        --------->AGP1                                 <----------DOF2                        <---------ARR11(3)                                 <---------------AGL15                  <---------AGP1                ------>ZmHOX2a(2)--------------->AGL15          <---------YAB1              <---------ARR11(3)<-----------------AGL1      --------->YAB1------>ZmHOX2a(2)        <---------YAB1          <-----------------AGL2     <---------YAB1--------->CCA1(2)      --------->YAB1           ---------->ID1             <---------AHL20(2)                     <---   ====================HOX2a_HOX2a                        --------->AHL20(2)                     <---   ------>ZmHOX2a(1) --------->YAB1                      --------->YAB1 --------->ARR11(3)       <--- ----------GT1--------->ARR11(3)<-----------------AGL3  <---------YAB1 --------->RVE1(1)         <--- -----DOF2   --------->YAB1   <-----------GT1        <---------YAB1 ---------->DOF2 <----------DOF2   ttttcctctcatgaatgatcttaccataagtttttctttttttggtcaaaaccatatgattataatatgaaaaagatctaaataggctttatctgtatga  14317000                                                                              <---------AHL20(2)                                                                             <---------------AGL15                                                                             <---------WOX13(1)                                                                           --------->ATHB12                                                                        <------------CBF                                                                      <---------YAB1    ----------->GT1                    <---------AHL20(2)        ------>NtERF2--------->AHL20(2) ------bZIP60(2)                       --------->AHL20(2)       --------->ANAC58 ------ANAC58                          --------->AHL20(1)       --------->ANAC58 ------ANAC58        <----------DOF2   <---------AHL20(1)       --------->ANAC46      --------->ARR11(3) ------ANAC46  ---------->DOF2      --------->YAB1              --------->DEAR3(1)  <---------TOE2(3)   cttggagggtcaaaaactaaagtcttttagactcttagtaataaaatgttgaataagtcttgttcgacgcctcttattgatttattaagaaattgaccag  14317100                                                                                              <------                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                      --------->SPL7                                                                                     <---------MYB52(1)                                 <---------ANAC46                                  <---------ANAC55(2)         <------NtERF2         <---------LBD16                                     --------->ANAC58  ---------->DOF2             <-----------RAV1(1)             --------->ATHB12     --------->ANAC58   catgaaaaggaggcattgctactatgtaatgtctgggggggagtttcacatcgatataggctattgatgggccttagtatgaagcccgtaagcccatatt  14317200                          ----------->GT1                     <------ZmHOX2a(1)     ----------->RAV1(2)                  <-----------RAV1(2)      --------->At4g35610                                   ----                  <------NtERF2     ------------>CBF                           --------->MYB46(3)----                  --------->ATERF1(1) --------->WOX13(1)      *TSS        ------>ZmHOX2a(1)      ---- ------CBF      <---------ANAC46---------->DOF2      --------->ICU4<---------CCA1(2)      -----------   gaagctcgagtcttgatggcgcaggagagagagaaaaagacaatcacctgtagtaatctttgaagactcttatctcctctatccaccaagagagggaaaa  14317300                                                                                      <-----------HVH21    --------->AHL20(2)                 <---------ARR14(2)                      <---------ANAC58   --------->YAB1                      --------->ARR14(2)                      <---------ANAC58 ------->GT1                          <------ZmHOX2a(1)                    <---------ANAC46 ----->ANAC58                       <---------TOE2(3)          ------>ZmHOX2a(1)<----------DOF2 ----->ANAC58        <----------ID1 <---------TOE1(3)  <---------ALFIN1    <---------ANAC58 >GT1        <-----------RAV1(2)  --------->CCA1(2)   --------->MYB46(3)   <---------ANAC58       ---   cgaaataaaaatagcacaggggagagacaaaatgagataaggatttgaagcctctcaccactctcctcgttttcgcttcgtgcttatttgtcaaacgcga  14317400                                        --------->HSFB2a(2)                                        <---------HSFB2a(2)                                  --------------->AGL15                                 <-----------------AGL3                             <----------DOF2                                 <-----------------AGL2                        <---------At4g35610                                 <-----------------AGL1                        --------->At4g35610                                 ====================================================================                             <----------DOF2                                 <--------P         <-----------ARR10   <---------DAG2                               <---------TOE2(3)      --------->ANAC46   ---------->ID1<---------LBD16                  ---------->DOF2            <-   <-----------GT1  <----------DOF2 <----------DOF2                   <----------DOF2              -- ------>HSFB2a(1)   <---------DAG2<---------------AGL15             --------->At4g35610       <------   acatttcaccgaaacttagcgacttttctcgctttactctttctgggagcaatttctcagagcataggcgagcttaaaggtagctccttttcttagcttt  14317500                                             <---------MYB46(3)                                             --------->HSFC1(2)                                   --------->LBD16                                  <---------ANAC55(1)                                  <---------ANAC58                                  <---------ANAC58                                  <---------ANAC55(2)                                  --------->ANAC55(2)   <-----------GT1 ==============MADS_MADS    <---------YAB1   <---------HSFC1(2)<----------DOF2 --------------AGL15       <---------TOE2(2) <---------HSFB2a(1)  --------->TOE2(3) ------------->AGL15       <---------TOE1(2)<---------------AtSPL8--------->YAB1 ----DOF2        <-----------GT1  <---------ANAC46     --------->AHL20(2)               <-----------GT1   gctcaaatgggtttcttagttactcttcttatgtttccgtgataagatggttcgaaatttactagctttcttaatggaaatttttgagtttttctagtta  14317600                                                                                                  <--                                                                                                 ----                                                                                          <---------ANAC58                                                                                      ---------->DOF2                                          ------>ZmHOX2a(1)                          <------ZmHOX2a(1)      --------->YAB1                --------->ALFIN1                      <---------MYB46(3)---------      --------->AHL20(2)      ---------->DOF2           <----------DOF2<-----------RAV1(1)<---------ANAC58 <---------ZAT14        ----------->GT1   <----------DOF2     <---------GLK1(2)    <---------TOE2(3)   gactacaatgaaatttcaattcgaaattgagaaaaagagtggtccttttcttcatatgctttcagattagtctgtgttgttgtctgaggaaagcttgtaa  14317700                                                                                             --------                                                                                             --------                                                                                             ------>ZmHOX2a(1)                                                                                            <--------                               ----------->HVH21                                <---------ANAC58 >>>>>>>>>WRKY18             <---------At4g35610                  <---------------AGL15    ---------- -------ICU4                 <------MYB46(1)                      --------------->AGL15 --------->KAN4(2) ----->ICU4                  <------MYB83                  <-----------GT1      <---------ANAC58 <--- -->GT1                  --------->ALFIN1            <---------YAB1             ----------->RAV1(2)   ttttgacagtgtgtaatggttttctatgtgtaggtgacagttcttagctatggctacgattacaccttcttctattagcaatgcctggctcattcctgga  14317800  Previous    Next  AGI:  At4g29050.1    Description:  lectin protein kinase family protein. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G70110.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G43700.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G70130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15684.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Prote Range:  from: 14314824    to: 14316885    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g29060.1    Description:  EMB2726 (EMBRYO DEFECTIVE 2726); translation elongation factor. similar to translation elongation factor Ts (EF-Ts), putative [Arabidopsis thaliana] (TAIR:AT4G11120.1); similar to Os12g0541500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066956.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ69965.1); contains InterPro domain Translation elongation factor EFTs/EF1B; (InterPro:IPR001816); contains InterPro domain UBA-like (InterPro:IPR009060); contains InterPro domain Translation elongation factor EFTs/EF1B, dimerisation; (InterPro:IPR014039); contains InterPro domain Ubiquitin-associated/translation elongat Range:  from: 14317262    to: 14321573    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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