Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <---------MYB46(3)                                                                            <-------GAMYB                                                                           <-----------RAV1(1)             <---------YAB1                                              --------->At4g35610           <---------ICU4                                                <---------At4g35610          <---------YAB1                                              <---------ZAT2        <---------ICU4                                                --------->At4g35610        --------->YAB1                                                <---------At4g35610       <---------YAB1                                                <-----------RAV1(1)     --------->YAB1                            <---------ZAT14     --------->At4g35610         ------     <---------ICU4                          --------->ANAC58      <---------At4g35610         ------    <---------YAB1                           --------->ANAC58     <-----------RAV1(1)      ==========  <---------ICU4                  <-------TEIL --------->ZAT14--------->ARR14(2)           <------ZmHOX2a(1)  --------->YAB1    ------>ZmHOX2a(1)    <-----------HVH21    <---------ARR14(2)    <---------MYB46(3)   ctcatcatcatcatcattcttcctcttggactcagattcaatgtgtcactccagtactgggccatatactgctgctgctgttgttgttgttgaggactaa  13975500          <---------ANAC58    --------->ATHB12                   <-------GAMYB   <------ZmHOX2a(2)                  <---------MYB46(3)                               <---------ZAT14  --------->ARR11(3)             <---------ANAC58                ------>ZmHOX2a(2)<---------GLK1(2)  <---------ARR11(3)             <---------ANAC58         --------->TOE1(2)    <---------ANAC46 --------->GLK1(1)          <---------ANAC58         --------->LBD16          <---------At4g35610 <---------GLK1(1)          --------->ETT(1)        <---------HSFB2a(2)   <---------REM1(1)--------->ALFIN1 ---->DOF2<---------ANAC58  <---------ANAC46        --------->HSFB2a(2)   <-----------RAV1(1) --->MYB52(1)               <---------ANAC58       <---------LBD16        <---------MYB46(3)       -- =========HOX2a_HOX2a     <-----------HVH21       --------->MYB52(1)   <---------MYB46(3)  <---------   aggagatcatttgcttctggccttgcattgtcgggtcttgtcgttgctcaagtaccggaacgtatgatccgagttgttgttgctgattctgaagtgttgg  13975600                                                                                              ------>ZmHOX2a(2)                                                                                              =======                                                                                             <------ZmHOX2a(2)                                                                                             ========                                                                                            ---------                                                                                            <--------               --------->ANAC58                                                             ---------               --------->ANAC58                                                             <--------              --------->GLK1(1)               ----------->GT1                               ---------        --------->DAG2                      <---------ARR14(2)         <------ZmHOX2a(1)    <--------       ---------->DOF2 <---------TOE2(3)    --------->ARR14(2)         ==============================HOX2a_HOX2a ---->ZmHOX2a(2)      --------->MYB52(1)   <------ZmHOX2a(1)           =============================HOX2a_HOX2a --RAV1(1)   ---------->DOF2    <------ZmHOX2a(1)             <------ZmHOX2a(1)            <---------CCA1(2)   atcgagagaaaaagggaaagcctctaacgaataaggagaagaagaggattggaaatagggtttaggacgactaggactcttcattttcttcatagatctt  13975700    --------->ALFIN1   ------->PIF5   <-------PIF5  <---------O2  =================================bZIP_DOF  <---------ANAC46  <---------ANAC58  <---------ANAC58  <---------bZIP60(2)  --------->O2  --------->TGA1a                                                                            <-------  <---------TGA1a            <---------KAN4(2)                                              ========= ==========================HOX2a_HOX2a                                       ---------->DOF2<-------- ==========================HOX2a_HOX2a            <---------ANAC58           ======================== >ARR11(3)              ---------->DOF2           <---------ANAC58        <-----------HVH21<---------ANAC58 -AGP1              ------>ZmHOX2a(1)             --------->ANAC55(2)   ------>ZmHOX2a(1)  <---------ANAC58 >AGP1      <---------HSFC1(2)                    --------->YAB1       <---------ALFIN1<----------DOF2 -ARR11(3)  --------->HSFC1(2)--------->ICU4   <----------DOF2     <---------At4g35610 ============== >ARR14(2)  --------->HSFB2a(1)            <-----------GT1    <---------ARR11(3)      <---------ICU4 -ARR14(2)  <---------HSFB2a(1)--------->YAB1 <---------DAG2  --------->ARR11(3)  <-------TEIL   ggggacgtggaagaagcttctcctccaaaagaatgatcaacatttttacctttcgtaatacaaagatttagctcctcgtcaaagtccatctttgcttcac  13975800                  --------->At4g35610                  <---------At4g35610             ----------->HVH21             --------->ALFIN1           --------->TGA1a           <---------O2           <---------TGA1a           <---------ANAC58           <---------bZIP60(2)      ---------->DOF2    <---------ARR14(2)      ===============bZIP_DOF   --------->TOE2(3)<---------ZAT14   --------->TOE1(3)--------->ZAT14 --ZAT14   <---------ANAC58                                                                  <------- ====================bZIP_DOF                                                                <------- --DOF2    --------->O2  --------->ARR14(2)                         <---------ZAT2      <---------ICU4 ====================bZIP_DOF                                 <------ZmHOX2a(1)----------->GT1 ====================bZIP_DOF ----------------->AGL1 --------->GLK1(2)   <------ZmHOX2a(1)   <-------   tgatgccttaaagacgtggcagttcacgatttgccaaaacagagagcaatggaagaatttgagaggagagagctaggaaaacagagaaaattatgtcttg  13975900                                                                   <---------AHL20(2)              *TSS                                                 --------->AHL20(2)     <---------YAB1                                            <---------RVE1(1)                   <-   <-----------------AG                                        <---------CCA1(1)     <---------ARR11(3)   <-----------------AGL1                                     --------->ARR11(3)     --------->ARR11(3)  ---------->ID1      --------->CCA1(2)                       <---------ARR11(3)     <---------GLK1(2) --ANAC58  <------MYB83                               --------->ANAC58          ------->GAMYB  ------ --ANAC46  <------MYB46(1)              <-----------TBP--------->ICU4          --------->ANAC46<----- --ANAC58 --------->MYB59      <---------REM1(2)      --------->ANAC58 <---------AHL20(2)    --------   ttttgttcttatttggtaagagagagacgactctacatgggtttatatatgagggcaagaattagatatttatttttttcaacgaaagattttgctaacc  13976000                                                             --------->KAN4(2)            --------------->AtSPL8                        <-------GAMYB ---------DOF2                                    <---------------AGL15<----------DOF2 --->MYB46(3)                                     <----------DOF2     <---------ANAC58            --- -------MYB.PH3(1)                             <---------ARR11(3)     <---------ANAC58         ------ ->MYB52(1)<---------AtLEC2                    --------->ARR11(3) <----------DOF2   --------->ATHB12-   gcttttgtaatttgtatgtcccatctatctattgacgactattcaaaactatctttttggggttattcctttgcttttactccaattcattggccaataa  13976100                                                                                           <---------ANAC55(2)                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                    --------->SPL7                                                                                   --------->SPL1(1)                                                                                   <---------SPL1(1)                                                                                  <---------SPL7                                                                                  <---------SPL1(2)                                                                                 <---------ANAC58                                                                                 <---------DEAR3(2)                                                                                 <---------ANAC58                                                                                --------------->AtSPL3                                                                                <-------TEIL                                                                              ------------------>SPL14     <---------TOE2(3)                                                     <---------DOF5.7(2) ------->DOF2                                     --------->ANAC46       --------->DOF5.7(2) --->YAB1                        --------->ARR11(3)     ------->GAMYB   --------->TOE1(3)  <---------O2 ---------->GT1                  <---------ARR11(3)  ---------->DOF2    --------->TOE2(3)  --------->ANAC55(2)   gaaagttaagaaaatgagcatttgaaaaatagagagatattgacacataaaaacacaacgcgcagagatgaaaacattaacgtccgtacgaatacgtggc  13976200                                                                                             <-------                                                                                          <---------bZIP60(1)                                                                                          <---------ALFIN1                                                        ----------->GT1                   --------->REM1(1)                                                 --------------->AGL15                    --------->bZIP60(1)                                                 <---------------AGL15                   <------NtERF2                                                 <---------DAG2                         <---------ATERF1(1)                                           ------>ZmHOX2a(1)                        --------->DAG2                            --------->YAB1--------->TOE2(3)                        ---------->DOF2                            --------->ATHB12     <----------DOF2                   --------->SPL7                 --------->At5g28300      --------->TOE1(3)                     <---------ANAC58               <---------DEAR3(1)      <---------ARR14(2)              <----------DOF2  ------>NtERF2              <---------ORA47(1)      <---------CCA1(2)<---------AHL20(2)<---------AHL20(2)------>NtERF2     <---------MYB52(1)    <-------TEIL--------->ARR14(2)      <-----------GT1  <---------ANAC58    -   attctctgtttttttggacggtgaaggcattcattagttcatatccttcaactttatttagttattttccaagctttaattttcgtaaggcgacaccact  13976300                                                                                                   <-                                                                                                  <--              <---------TOE2(3)                                                         <------MYB46(1)       ---------->DOF2                                                                  <------MYB83<  ----------->GT1       --------->At5g28300           --------->AtLEC2       --------->AHL20(2)<----- --ALFIN1   --------->CCA1(2)             --------->AHL20(2)        <----------ID1     <---------AtMYB61 --------->DOF2        ----------->GT1    <---------AHL20(2)      ----------->GT1   <-----------RAV1(1)   tacaaagttaaaagataagattagactgtaaaaaacatctataatttaagaggtttatgcaaattgaatggagacaaaaaaaaatgatgttggtgtaatg  13976400  Previous    Next  AGI:  At4g28140.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF054 (ERF054) [Arabidopsis Thaliana] (GB:Q9M0J3); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT2G20880.1); similar to RAP2-like protein [Populus trichocarpa] (GB:ABQ62985.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 13974697    to: 13975914    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version