Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    --------->AHL20(2)          --------->AHL20(2)                  --------->DAG2      <-----------HVH21 ----->AHL20(2)              <---------AHL20(2)       <---------ANAC46        >>>>>>>>>RAP2.2 -->YAB1                     --------->AHL20(2)     <---------ANAC46        <---------ARR11(3) --ZAT6                 <---------ARR11(3)       <-----------RAV1(1)       <---------CCA1(2)  ------- --->GT1              ----------->GT1--------->At4g35610         ---------->DOF2---------->DOF2 -----   aaaataaactatcaaatactaaacaagttatttaaaataagctaagttattttgttgtgtattttcgaaaagtctatatatctaaaggtgtcaaataaaa  13878500                              <------MYB46(1)                              <------MYB83                             --------->MYB46(2)                             --------->MYB111(2)                   ==================================================================================                   --------------->AGL15               >>>>>>>>>CBP60g                   <---------------AGL15               >>>>>>>>>SARD1                  ----------------->AGL2       --------->ICU4               --------->GLK1(1)               <---------ATHB51 --------->ANAC55(2)         --------->MYB111(1)--------->YAB1 <---------ANAC55(2)   --------->YAB1    --------->HSFB2a(2)               --------->YAB1       <---- --->DOF2      <---------GLK1(1) ----------->GT1<---------ICU4 <------ZmHOX2a(1)       <----------DOF2 ---->ANAC46   --------->HSFB2a(1)       <---------HSFB2a(2)  ----------->GT1--------->ZAT6     -----   gtcacataatgtttcgaaaatcccataatagtaggtggtatttttagaaataatgaaatttgggaggaaaaaatcactaatactacttactttgtcaact  13878600                                                                                        ------->MYC2                                                                               <----------DOF2                                                                            <---------ARR11(3)                                                                        ---------->DOF2 <-------MYC3                                                                        =========================bZIP_DOF                                                                     --------->MYB52(1) ------->MYC3                                                                   <---------MYB52(2)   <-------MYC2                                                                   <---------MYB46(2)  <---------O2                                                                 --------->MYB52(1)    --------->ANAC55(2)                                                               <------------MYB.PH3(2) ----------->GT1              --------->ICU4                                   <---------MYB46(2)      <---------ANAC55(2)         ----------->GT1                                       <---------MYB52(2)      --------->ANAC46        <---------TOE1(3)                                      <---------MYB59 ==================bZIP_DOF        <---------TOE2(3)                                      ==================================MYC_MYB      ---------->DOF2                                          <<<<<<<<<<AtMYB44       --------->O2 ===========MADS_MADS                      --------->DAG2      <---------MYB111(1)     --------->TGA1a -----------AGL15              ---------->DOF2   ------>ZmHOX2a(1) <---------MYB111(1) <---------TGA1a ---------->AGL15  <-----------GT1        ---------->DOF2    <-----------GT1--------->ARR11(3)   atatgtagtaaaggtaaatattaacaaaattacaaaagaaaacaaaaagtcctacagttttagtaactaactaacaaagagctttaaacacgtgaaaagt  13878700                                                   ------->GAMYB                                                 --------->At4g35610                          <------                                                --------->MYB52(1)                            -------                                               <---------WRKY38(1)                           --------                                              --------->MYB46(3)                             <-------                                              <---------ATHB12                            --------->AHL20(2)                                            --------->WOX13(1)                            <---------AHL20(2)                                        <---------ZAT18                               --------->YAB1                                        --------->ZAT18                            <---------ICU4                                       <---------ZAT6   --------->ANAC58           --------->YAB1                                    --------->ALFIN1    --------->ANAC58          <---------ATHB12  -  <---------AtLEC2               <------ZmHOX2a(1)--------->MYB46(3)     <-----------GT1  <---------YAB1   ttttgcataaaactagtactagtatattagaactaggagtagtgctcaatcaacggccaagtcaaaacaaacaaatcaccatcaataatcatataattaa  13878800          <---------ICU4         <---------YAB1                                                       --------->WOX13(1) --------->YAB1                                                            <---------ARR11(3) ---AHL20(2)                                           ---------->DOF2     --------->ARR11(3) -->AHL20(2)    --------->ANAC55(2)                <----------ID1         --------->CCA1(1) ->ICU4<---------ICU4                             <------ZmHOX2a(1)  --------->YAB1 --YAB1--------->YAB1                       >>>>>>>>>TBF1          ----------->RAV1(1) -------->At4g35610------->TEIL         <------ZmHOX2a(1)    <---------ATERF1(1)    <---------DAG2   taagcagaatcatcatttatgtatttgataatgttcaagtgaggaagaagaaggagacaaagacgaccccaacataatatctatcaccttctctatagat  13878900                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              ------>NtERF2                                                                                             --------           --------->GLK1(2)          <---------MYB52(1)                                     --------           <-----------ARR10         --------------->AGL15                                  ------>ZmHOX2a(2)          <---------GLK1(2)          <---------------AGL15                                  ---------     ------>ZmHOX2a(2)              ----------------->AGL2                                  ---------    <------ZmHOX2a(2)          <---------DAG2                              ---------->ID1  <------ZmHOX2a(2)    <---------GLK1(1)          <----------DOF2                          <----------DOF2    <---------ATERF1(1)   <---------AGP1             <---------ANAC58                     ---------->ID1         <---------ARR14(2)   --------->ARR11(3)         <---------ANAC58       ------>ZmHOX2a(1) <---------ICU4     --------->ARR14(2)   <---------ARR11(3)        *TSS   ----------------->AG<------------------------ANAC81 ----------->ARR10  <---------CCA1(2)<---------DAG2   <-----------------AGL3     <----------DOF2     <---------YAB1<--- --------->MYB59   <----------DOF2  <-----------------AGL1  <---------ALFIN1   <----------DOF2<------   agttagatctcagaatctctccttttttgtttgctttacccttatttggccattcctgtcttccactttgtcatcttttccctttctgatgggatccgcc  13879000       --------->ANAC58       --------->ANAC58       --------->ANAC46      <---------LBD16     --------->MYB52(1)    ----------->HVH21 ------->DEAR3(1) ------>RAP2.3(1) ------>ATERF1(1) ----NtERF2 -->NtERF2 ----->At4g35610 ----->LBD16 ----->ABI4(1) ---->DEAR3(1) -----ATERF1(2) -----DEAR3(1) ---->RAP2.6(2) ---->RAP2.3(2) ---->RRTF1(3) ---->RRTF1(2) ---->RAP2.3(3)        <---------PCF5 ---->ATERF1(2)       ----------->HVH21 --->ATERF1(1)       --------->LBD16 --->ORA47(2)      <---------LBD16 --->RRTF1(1)     --------->MYB52(1) --->ERF1        <---------ALFIN1 --->RAP2.6(1)   --------->DEAR3(1)      ------>MYB46(1) --->DEAR4(2)    --------->AtMYB61       ------>MYB83 --->RAP2.3(1)  --------->MYB46(3)      --------->ANAC46 -->At4g35610 --------->ANAC46          --------->ANAC58 -->LBD16    --------->ZAT18            --------->ANAC58 ->DEAR3(1) --------->ATERF1(1)        --------->MYB46(3)                                           < ->ANAC46  --------->PCF2             <---------At4g35610                                           < >ATERF1(1)------>NtERF2   <---------HSFB2a(2)                                                      < >MYB46(3) <---------ATERF1(1)  <---------HSFC1(2)                                                 -- ------ATERF1(1)<---------MYB55(2)  --------->REM1(1)                         --------->ATHB12     <- ---ATERF1(1)--------->DEAR3(1) --------->HSFC1(2)          --------->At4g35610          <------ZmHOX2a(1)   gccgaactcacggagcccaccaccgggaccgagaagcttcaccagccaatagaagttgaagaagatgacgaacaaattgttgatttggagaggaaaacat  13879100                --------->ANAC46                --------->ANAC58                      --------->ZAT2           <----------ID1                             <---------ZAT2       ---------->DOF2                           <---------ALFIN1    --------->AtLEC2                            ------>MYB46(1)                       <---------MYB46(3) <---------MYB52(1)         --------->ETT(2)    -------->P                           <---------AtMYB61 -----------HVH21           <---------ZAT14     ------>MYB83                      ----------->HVH21 ---------RAP2.6(3)         --------->ZAT18    ----------->RAV1(1)        <---------DAG2     -------- -----------TGA1--------->ANAC58              --------->AtMYB61           <----------DOF2 <---------SPL7 ------->ANAC55(2)       <---------ANAC46  --------->YAB1     <------NtERF2     --------->LBD16 --------ANAC55(2)       <---------ZAT6   --------->MYB46(3)<---------DEAR3(1)<---------LBD16--------   tccgtcatggaaagggacacgatactagtgtggacagtagtacaatcaccaacaccagctcgtcgtcgtcttctagcttttccggtgatggtggaacgga  13879200                                                                  <---------ZAT2                                                               --------->LBD16                                                              --------->LBD16                   --------->MYB52(1)                         <---------HSFB2a(2)        --------->ARR14(2)                      <---------AHL20(2)--------->ZAT2      --------->LBD16   <---------DEAR3(1)   ----------->GT1  --------->HSFB2a(2)     --------->LBD16  ------->GAMYB   ----------------->AG   <---------LBD16 ->ANAC58      --------->ANAC46      --------->MYB52(1)      <---------HSFB2a(2)                   -- ->ANAC58--------->GLK1(1)         --------->KAN4(2)       --------->PCF5                          --   agagacccccgatttccacagcaacggcgatggagaacataccgatttagtaaatttggaggtcccggagctagaaactgaaatcgtatttcaccaagag  13879300          ----------->ARR10                      --------->ZAT14                                    -     <---------ANAC46                    <---------TOE2(3)             <------ZmHOX2a(2)            -  --------->ETT(2)             <---------LBD16   <---------ZAT14   <---------TOE2(3)                < --------->TGA1              ----------->HVH21--------->MYB52(2)<---------ATHB51          <---------ZAT2 --------->HVH21  --------------------->WRI1<--------P  <---------ARR11(3)<---------ANAC55(2)       <   catgacgacgggaagaattgcatcgtcttcttcgacggagaacaaggttagtttactaaatctccgattatggatcacttgaagaaattccaagcttgtt  13879400  Previous    Next  AGI:  At4g27870.1    Description:  integral membrane family protein. similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT4G27860.1); similar to Os06g0103800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056545.1); similar to integral membrane protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67955.1); contains InterPro domain Protein of unknown function DUF125, transmembrane (InterPro:IPR008217) Range:  from: 13878929    to: 13882888    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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