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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                   =======================RAV
               --------->YAB1                                   --------->ANAC58
            --------->YAB1                                      --------->ANAC58    <------ZmHOX2a(1)
            <---------ICU4                               <---------ANAC58     ----------->RAV1(2) --
           <---------ATHB12                              <---------AtLEC2     <---------ANAC55(2)<--
         --------->WOX13(1)                              <---------ANAC58   <-----------GT1   ------
---------ARR10<---------YAB1                         <---------ANAC58    --------->ANAC58     <-----
------At4g35610<---------ICU4                        <---------ANAC58    --------->ANAC58-----------
----GT1<---------ATHB12  --------->TOE2(3)          --------->ZAT2 ----------->RAV1(1)<XXXXXXXXXXXXX
 
gctcttccctatcaatcatcatcaccatcgtcaacacttaaaccctagaagacagagcttgcatgagaagcaacacaagttacctgaggaatttgacaga  13853800
                                     --------->ANAC58
         --------->ALFIN1            --------->ANAC58
       <---------ANAC58     <---------ANAC58
   --------->MYB46(3)       <---------ANAC46
------->SPL7--------->ATERF1(1)      --------->GLK1(2)
----ZmHOX2a(1)             ------>NtERF2
--->At4g35610           <---------At4g35610--------->ETT(2)           <---------ANAC46        ------
----At4g35610 <-----------HVH21  <------ZmHOX2a(1)     --------->MYB52(1)                  <--------
>HVH21 <---------ANAC58 --------->At4g35610<---------ETT(2)           <---------ANAC58     ---------
XXXXXXXXMIR4221<------NtERF2<---------ANAC58       --------->At4g35610<---------ANAC58<---------LBD16
 
ggacgacccagcgtggccgtcgaagaccgctgcgtaggagaagctatcgacagcatcagaacggattacgatgtcgtcttccatctcatctcggaatcct  13853900
                              <---------O2
                              --------->TGA1a
                              --------->O2
                              <---------TGA1a
                              <---------bZIP60(1)
                              --------->bZIP60(1)
                              --------->ANAC58
                              --------->ANAC58
                              --------->bZIP60(2)
                              --------->ANAC46
                            <---------ALFIN1
                           ----------->HVH21
                           <------NtERF2
                           --------->ATERF1(1)                                           --------->TOE1(2)
                          <-----------TGA1                                              <---------O2
                          ------>NtERF2                                                 --------->TGA1a
                          <-----------HVH21                                             <---------ANAC58
                         --------->bZIP60(1)                                            <---------ANAC58
                    --------->GLK1(2)                                                   <---------TGA1a
                    ------->TEIL                                        --------->MYB52(1)
                    --------->ARR14(2)                              <------NtERF2       <---------ANAC46
                    <---------ARR14(2)                             --------->LBD16      ============
                 --------->MYB46(3)                       --------->ANAC58   ----------->HVH21     -
--------->ZAT6   <---------ATHB12           --------->MYB52(1)   <-----------------------TaNAC69(2)<
--->TOE2(3)    --------->MYB52(1)  <-----------HVH21      ------>ZmHOX2a(2)=======================MYC_MYB
-ARR14(2)   ------->GAMYB--------->ANAC46  ----------->HVH21     <---------LBD16    --------->AtMYB61
>ARR14(2)   ============================MYC_MYB           --------->ANAC58 ------->GAMYB--------->O2
 
tgaacactcgtgtaaccccaacgaatcggcgtcacgccagtcagagacgacggagcgtcgatcgcaatcgcggagcaacggtgacgaccatacgtgggat  13854000
                      --------->At4g35610
                      <---------LBD16
                      <------NtERF2
                     <---------ATERF1(1)
                     <---------ORA47(2)
                     ------>NtERF2
                     <---------DEAR3(2)
                     <---------ERF1
                     <---------RAP2.3(1)
                    <---------DEAR4(1)
                    <---------RAP2.3(3)
                    <---------At1g77200
                    <---------DREB2C(2)
                    <---------DEAR3(1)
                   --------->ATERF1(1)
                  <-----------HVH21
                <------NtERF2
            ------>NtERF2
            --------->ABI4(1)
           ------->GAMYB
           --------->DREB2C(2)
           --------->DEAR3(1)
           --------->ANAC46
          --------->RAP2.3(1)
          <------NtERF2                      <------NtERF2
          --------->ATERF1(1)               --------->LBD16
          --------->MYB46(3)               <---------ANAC58                        ---------->DOF2
         ------>NtERF2<---------At4g35610  <---------ANAC58                      <-----------RAV1(2)
         <---------ATERF1(1)               <---------ANAC46                     <------NtERF2
        <---------ALFIN1      --------->ARR14(2)            ---------->DOF2  ------>NtERF2
       <---------ABI4(2) <------NtERF2    <---------LBD16 ----------->HVH21<---------RAP2.6(2)
===================MYC_MYB    <---------ARR14(2)  <-----------RAV1(1)     <-------TEIL
-------->ANAC46------>NtERF2 <------ZmHOX2a(1)    --------->ALFIN1      --------->ARR11(1)
----------ID1 --------->DEAR3(1)        --------->ALFIN1<---------ANAC46<---------ARR14(2)  --------
 
agacgacaaggccaccgccagcgtcggcggaaggataggctgagtggcggagagtgttggagtgaaagcgatgaagatgcggcctcagaagcgccatgac  13854100
                                                              --------->MYB52(2)
                                                            <---------MYB52(1)           --------->ARR11(3)
                                                            <--------P                   <---------ARR11(3)
                                                           --------->At5g28300          --------->RVE1(1)
                                                           <-------GAMYB      <---------ANAC46
                                                     <----------DOF2<---------ANAC46    --------->CCA1(1)
       --------->ANAC58                              ------>ZmHOX2a(1)   <---------ARR14(2)
       --------->AtLEC2                            ----------------->AGL1--------->ARR14(2)     *TSS
       --------->ANAC58                          --------->ZAT18    <---------ANAC58--------->AHL20(2)
     <-----------RAV1(2)                  ---------->DOF2<---------TOE2(3)    ----------->GT1   <---
   <-----------HVH21--------->MYB59     --------->YAB1   <---------TOE1(3)<---------GLK1(1)   <-----
--->HVH21 ---------->DOF2       ----------->GT1  <---------ZAT18    <---------ANAC58<---------AHL20(2)
 
tcagtgagtcaggcaaagcgagttaagtagaagaagagaaaaatcaaaagagtgtcctttacggttagtggccgtggattttcgtaaaaaaatatctgag  13854200
                                                                                                  <-
                                                                                                 <--
                                                                                                 ---
                                                                                                <---
                                                                                                ----
                                          <----------DOF2                                       <---
                                       <---------ALFIN1                                         ----
                                      <---------WRKY12                                          ----
                                      <---------WRKY38(1)                                       ====
                                      <---------ZAT18                                           <---
                                   ------->GAMYB                                             <------
                         <---------MYB46(2)                                           <---------YAB1
                         <---------MYB59  <---------DAG2                             <-----------TBP
                         <---------MYB52(2)                                    <---------ATHB12 ----
               ------>NtERF2    <-----------GT1                              --------->WOX13(1) <---
     --------->GLK1(1)   <------------MYB.PH3(2)                           ------------>CBF <-------
---ZmHOX2a(1) --------->LBD16   --------->MYB52(1)                    --------->YAB1<----------DOF2
----TOE2(3) <---------LBD16--------->MYB52(1)       <XXXXXXXXXXXXXXXXXXXXXXXMIR405A/B/D     <-------
 
gataagagaaatcaacgcgggcttcttaactaacttaacggtccactttataagttttgggcttaggcccaaatcgtgatcaatcaacttttatagcttt  13854300
             --------->ATHB12
             -------->ATHB1
      ---------->DOF2
     <------ZmHOX2a(1)
  <---------LBD16
---------DOF2--------->ATHB51
-------------AGL15
------------>AGL15
--------------AG
------------->AGL1
--------------AGL1
------------->AGL2
------------->AG                                                      <---------AHL20(2)
================================================MADS_MADS             --------->AHL20(1)
--------------AGL3              --------------->AGL15                 <---------AHL20(1)
----DOF2    <---------YAB1      ------->GAMYB                         --------->AHL20(2)
------------->AGL3            --------->At4g35610             ----------->GT1
--------------AGL2 <-----------RAV1(1)   ---------->DOF2 <---------YAB1
--ANAC58 --------->ICU4   --------->ANAC58   <-----------HVH21<---------ANAC46
--ANAC58----------->GT1   --------->ANAC58   --------->ARR11(3)    --------->YAB1                 --
 
ccttttcaggaaagtattattgctgtcgctagcaactgcaaatagaaaggtcatgtagttatgttttgtataataaatttttggttttgcataatgctct  13854400
                                                              --------->YAB1
                                                           --------->YAB1
                                                     --------->YAB1
                                                     <---------ICU4
                                         <---------DAG2   <---------YAB1               <---------ZAT14
                     --------->ARR11(3)  <----------DOF2<-----------GT1                <---------ZAT18
    ------>ZmHOX2a(1)<---------ARR11(3) <---------DAG2  --------->YAB1          <------ZmHOX2a(1)
 ------>ZmHOX2a(1) <---------TOE2(3) <-----------GT1<---------YAB1         <---------HSFB2a(2)<-----
-------->ID1<---------TOE2(3)     <----------DOF2 --------->YAB1   ------>ZmHOX2a(1)   --------->ZAT14
 
tgtcctccttcatttaagaattaagatgttccctattcttttacctttttcaagtataattacaataatcctatttatctagaggaacagtgtagtttca  13854500
              ----------->GT1
             --------->DAG2       ------>ZmHOX2a(1)                                         --------
       ----------->GT1      <---------DAG2                                     <---------TOE2(3)
       <------MYB83      <-----------GT1                                       <---------YAB1
       <------MYB46(1)<---------KAN4(2)                                       --------->AHL20(2) <--
      --------->MYB59--------->YAB1                                           --------->YAB1<-------
 <---------AHL20(2)<---------TOE2(3)                                          <---------AHL20(2)----
----LBD16   ---------->DOF2 <----------DOF2          ----------->GT1   ----------->GT1     ---------
 
gggtttaatttggtaaaaagttaagaataaacttttcctcatgtctgtaaattatgtggtaatatgtatacagatggatattaatattagtctataaaat  13854600
                                                                         --------->ARR14(1)
                                                                         --------->GLK1(2)
                                                                        ----------------------->TaNAC69(2)
                                                                        <---------ARR11(3)
                                                                        <---------ARR14(2)
                                                                        --------->ARR14(2)
                                                                        --------->ARR11(3)
                                                                        <---------GLK1(2)
                                                                       --------->HSFC1(2)
           <---------ATHB12                                            --------->HSFB2a(1)
        <---------AHL20(2)                                             <---------HSFB2a(1)
       --------->AHL20(2)                                              <---------HSFC1(2)
     --------->ARR11(3)                                               ----------->ARR10           <-
     <---------ARR11(3)                                          <---------LBD16         ------>NtERF2
 ---------->DOF2    ---------->DOF2                              --------->LBD16        --------->DEAR3(1)
->AHL20(2) <---------YAB1                                       <---------ANAC58      ------>NtERF2
---------GT1--------->ATHB12                            <---------ARR11(3)            <---------ATERF1(1)
--AHL20(2) --------->ICU4                  --------->AHL20(2)   <---------ANAC46     --------->ANAC46
----->AHL20(2)    <---------YAB1           <---------AHL20(2)   <---------ANAC58     --------->DEAR3(1)
>AHL20(2) <---------TOE2(3)         --------->CCA1(2)   --------->ARR11(3)          <---------LBD16
 
taactaaagatttaatgatttataaaagaaatcgaagagatttgatttaaatattggaagaactcatccgtggaagattctcttgtctccgcctccatgg  13854700
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AGI:  At4g27800.1   
Description:  protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1). Identical to Protein phosphatase 2C PPH1 (PPH1) [Arabidopsis Thaliana] (GB:P49599;GB:Q9M0J6;GB:Q9STP6); similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT1G43900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48631.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045); contains InterPro domain Protein phosphatase 2C, manganese/magnesium aspartate binding site
Range:  from: 13851868    to: 13854197    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g27810.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53030.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71155.1)
Range:  from: 13854499    to: 13855724    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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