Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------ANAC58                                      <---------ANAC58                                      <---------ANAC46                                   <--------P                          --------------->AGL15                          <---------------AGL15                        ------>ZmHOX2a(1)                         <-----------------AGL3                       --------->TOE2(3) ---------ZAT18          <-----------------AGL2             <---------ARR14(2) -------->ZAT14 --------->ZAT6  --------->DAG2              --------->ARR14(2)                ------- ----->YAB1  <---------ATHB12   <---------TOE1(3)           <---------GLK1(2)              ---------- -STY1(2)--------->MYB46(3)     <---------TOE2(3)       --------->At4g35610     ---------->DOF2  <---   agtaaactctaaccaataacacaactatctacataaggttgcttcaaattacaaagatagcagaaactcaatcctcaaaactcaaagagaaacaaaagct  13603900                                                                                            ------->MYC3                                                                                           --------->O2                                                                                         <---------ALFIN1                                                                                     ------->MYC2                                                                                     <-------PIF5                                                                                     ------->MYC4                                                                                     ------->PIF5                                                                                     ------->MYC3                                                                                     <-------MYC2                                                                                     ------->PIF4                                                                                     <-------PIF4                                                                                     <-------MYC3                                                                                     <-------MYC4                                                                                    <---------TGA1a                                                               --------->ARR14(2)   --------->TGA1a                                                               <---------ARR14(2)   <---------ANAC55(2)                                             <---------At4g35610                   ------------>OsbHLH66                                             --------->ZAT2 --------->ANAC46      <------------OsbHLH66                                             --------->At4g35610   ------>ZmHOX2a(1)--------->ANAC55(2)                                            --------->GLK1(2)  ------->TEIL       <---------ALFIN1                                           <---------GLK1(2)--------->ANAC58   --------->AtMYB61                                --------->ZAT2       --------->GLK1(1)       ----------->RAV1(1)          --------->TOE2(3)     --------->At4g35610 <---------ARR14(2)      <---------ALFIN1<-------MYC3 -->At4g35610          <---------REM1(1)<-----------RAV1(2) --------->ANAC58--------->AtMYB61 >DOF2    --------->TOE1(3)   <------ZmHOX2a(1)     --------->ARR14(2)  --------->SPL7----------->HVH21 --------HVH21   --------->TOE1(2)    ----------->RAV1(1) ------>ZmHOX2a(1)--------->MYB46(3)    <---   gtcaaatacaaaccttgaacattggatgtagaggagctagcaccagaagctgcaggtctcctacgcatcctccgtccaccaccagcacgtgccacgtttt  13604000                                           --------->HSFB2a(2)                                           <---------HSFB2a(2)                                    --------->YAB1                                   <---------ATHB12                                  ------>MYB83                                  ------>MYB46(1)                                                   -                                 --------->WOX13(1)                                                <-                              --------->ANAC58                                                     --                              --------->ANAC58  ----------->GT1                                    <-        ------->TEIL        --------->MYB46(3)  <----------ID1                                ------- --------GT1   <---------AtLEC2--------->MYB46(3)                      <---------MYB59        -------   cacgaggttgaacctttgcatttcacatgaacaaccaatcaaatcccagaaggaaaaaaaaaacgagacattaccaaaattcaaatccattttcgcaaac  13604100         <---------ANAC58         ----------->RAV1(2)                            --------->O2         <---------ANAC58                ------>ZmHOX2a(2)    --------->HSFB2a(2)                ----       <-----------GT1                 --------->ARR11(3)--------->HSFC1(2)                      ----   --------->AHL20(2)                  <---------ARR11(3)<---------HSFC1(2)                    ------   <---------AHL20(2)                ----------->HVH21  <---------O2                       --------->YAB1 -------->YAB1         <---------At4g35610     <---------CCA1(2)---------->DOF2    --------->LBD16 --------ATHB12  <---------MYB46(3) --------->LBD16  --------->DEAR3(1)         <---------At5g28300 ------->ICU4   <---------AtMYB61  <---------ANAC55(2) <---------TOE1(2)      --------->MYB46(3) <--- --------YAB1<---------AtMYB61     --------->ANAC55(2)------>NtERF2<----------ID1 --------->ANAC46 -->ANAC58   --------->ALFIN1   ================HOX2a_HOX2a   <---------HSFB2a(2)<---------LBD16<---- -->ANAC58 <-----------RAV1(1)  ------>ZmHOX2a(1)    ----------->HVH21 ---------->DOF2    <---------YAB1   aatgataaattacctgtggtggttcagcaacttcctcccgtgatctagcatctctccgacgtttccaaaagaacaaaggaatcaccgcaactatgagaat  13604200                                 --------->WRKY12                                --------->DOF5.7(2)                         ------>ZmHOX2a(1)         --------->YAB1  ==========================HOX2a_HOX2a ---->ATHB1        <---------ARR11(3)                           <---------ARR14(2) ----->ATHB12      <-----------ARR10                       --------->ALFIN1 --->GLK1(2)       --------->ARR11(3)              --------->MYB52(1) ------ICU4       --------->RVE1(1)         ------>ZmHOX2a(2)   --------->ARR14(2) -----YAB1        --------->CCA1(1)  --------->TOE2(2)------->GAMYB      --------->GLK1(1)   cattgagactatcagagcaaatatctcctccatcgtttacctgtgatccaaaataaccgaagaggggattttgggaaatcgaactagaatattgaaattg  13604300                                                                               --------->GLK1(1)                                             *TSS                              --------->At4g35610                                         <---------ANAC58              --------->GLK1(1)               <---------GLK1(2)         <---------ANAC58             <---------ARR14(2)    --------->ARR14(2)              ------>MYB46(1)               --------->LBD16    <---------ARR14(2)              ------>MYB83                 --------->LBD16   <---------ALFIN1    --------->MYB52(1)            <---------MYB59  --------->ARR14(2) --------->ARR14(2) <---------GLK1(2)                --------->TOE2(3)<---------ARR14(2)<------ZmHOX2a(1)<----------DOF2   aaagaatatcggtttcagattagtctaaactcttaacctaatttcgttttccaaatcgtcgtcttgcccgaggatttgcagagctccactttggactcga  13604400                   <---------ANAC58                   --------->ANAC55(2)                   <---------ANAC46                                                <---------DAG2                   <---------ANAC55(2)                                             <----------DOF2                   ----------->GT1                                             <---------WRKY38(1)                   <---------ANAC58                                            <---------WRKY45             <---------MYB52(1)                                                <---------WRKY12            --------->At5g28300                                    <---------HSFB2a(2)           ----------->GT1                           ------>NtERF2 --------->HSFB2a(2)        ------------>MYB.PH3(1)     <----------DOF2 --------->ANAC58          --------->WRKY18(1)      ---------->DOF2         --------->ANAC46      --------->ANAC58 --------->ANAC46       <--------   tagagaagacaagcggttatttcgtaatttcccagcgactttgaaacactctggacgcctaagagtcttccaggcctctggtcaactttattgactttcg  13604500                                             --------->ANAC58                                --------                                       <---------WOX13(1)                                    <-------                                     --------->ATHB12                               ----------->GT1                                    <---------YAB1                                 --------->LBD16                                    --------->ICU4                            <---------ALFIN1                 <-----------GT1 ---------->ID1       --------->YAB1         ------>ZmHOX2a(2)-------      <---------ZAT14            <-----------------AGL1  --------->YAB1      --------->MYB46(3) --DOF2    <------------------------ANAC81   --------->ANAC58          <---------ANAC46      --------   atttcgactactgtgtttttaactgatggttttttgtcttaattggcacataacaagaataatagtttaagtgttgtgatccaccctggtaacaagatat  13604600        <---------ZAT6        ----------->GT1    <---------ZAT14 ->ARR14(2)                                                    ---------->DOF2 --ARR11(3)      --------->DOF5.7(2)                    <-----------------------TaNAC69(2)         -- -->CCA1(2)     --------->TOE1(3)                   ----------->GT1        --------->YAB1          -- ->ARR11(3)     --------->TOE2(3)               <---------HSFB2a(2)       <---------YAB1  <---------YAB1   actgagagtagagtcaaacgttaatggagaatgcttaacaatctcgtattacagaagtaacatgtgaaagaaaacgatgatggtctcttagtatcattcc  13604700                      --------->ANAC58                      --------->ANAC55(2)                      --------->ANAC46                      --------->ANAC55(1)                      <---------ANAC55(2)     --------->CCA1(2)                      --------->ANAC58       --------->ARR11(1)                <---------MYB52(2)           --------->ARR11(3)                                    --               ----------->GT1               --------->ARR14(2)--------->ANAC58                   ---               <---------ANAC55(2)           <---------ARR11(3)--------->ANAC58                ------               --------->ANAC55(2)           <---------ARR14(2)--------->ANAC46                ------               --------->ANAC58            ----------->ARR10--------->ZAT14                  --------               --------->ANAC55(1)    ----------->GT1       <---------ZAT14   ------>ZmHOX2a(2)<----- ------->ANAC58--------->ANAC58      --------->DAG2         --------->ZAT18-------->HAHB4    <------- ------->ANAC58--------->ANAC46    ---------->DOF2      <-----------GT1   --------->ICU4   <---------SPL7   aacgctaaaacagaaacaagtaacaagtaatcgaagggaaaggtgaagatatgttttgtaactgcacgatagagtaatgatccacttaaacggcctacgg  13604800  Previous    Next  AGI:  At4g27120.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95090.1); contains domain PTHR13270 (PTHR13270) Range:  from: 13601976    to: 13604345    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g27130.1    Description:  eukaryotic translation initiation factor SUI1, putative. Identical to Protein translation factor SUI1 homolog 1 [Arabidopsis Thaliana] (GB:P41568;GB:Q9SLK5); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT5G54760.2); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT5G54760.1); similar to Protein translation factor SUI1 homolog (Translation initiation factor nps45) (GB:Q9SQF4); contains InterPro domain Eukaryotic translation initiation factor SUI1; (InterPro:IPR005874); contains InterPro domain Translation initiation factor SUI1; (InterPro:IPR00 Range:  from: 13604564    to: 13606454    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version